Details for gene set V$E2F1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	V$E2F1_Q6
Enrichment Score (ES)	0.2956686
Normalized Enrichment Score (NES)	1.2895688
Nominal p-value	0.04304636
FDR q-value	0.2046643
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MCM4	1416214_at 1436708_x_at	94	6.274	0.0185	Yes
2	MCM6	1416251_at 1438852_x_at 1447756_x_at	95	6.259	0.0413	Yes
3	MYC	1424942_a_at	165	5.495	0.0582	Yes
4	PRPS1	1416052_at	244	5.034	0.0730	Yes
5	SNRPD1	1416336_s_at	250	5.006	0.0910	Yes
6	ATF5	1425927_a_at	280	4.852	0.1073	Yes
7	TOPBP1	1452241_at 1458480_at	429	4.243	0.1160	Yes
8	DNAJC9	1426473_at	517	3.954	0.1264	Yes
9	PHF5A	1424170_at	563	3.833	0.1383	Yes
10	RANBP1	1422547_at	570	3.814	0.1519	Yes
11	EZH2	1416544_at 1444263_at	581	3.793	0.1653	Yes
12	GMNN	1417506_at	688	3.583	0.1735	Yes
13	HMGA1	1416184_s_at	729	3.499	0.1844	Yes
14	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	789	3.389	0.1940	Yes
15	UNG	1425753_a_at	811	3.351	0.2053	Yes
16	RQCD1	1450887_at	869	3.249	0.2145	Yes
17	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	904	3.185	0.2245	Yes
18	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1100	2.946	0.2263	Yes
19	CDC5L	1428092_at 1460429_at	1156	2.874	0.2342	Yes
20	CDC25A	1417131_at 1417132_at 1445995_at	1192	2.824	0.2429	Yes
21	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	1203	2.812	0.2527	Yes
22	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	1216	2.803	0.2624	Yes
23	CDCA7	1428069_at 1445681_at	1268	2.749	0.2701	Yes
24	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	1296	2.728	0.2788	Yes
25	PCNA	1417947_at	1322	2.702	0.2874	Yes
26	MRPL40	1448849_at	1796	2.281	0.2740	Yes
27	SLC9A5	1420070_a_at 1455760_at	1907	2.216	0.2771	Yes
28	E2F3	1427462_at 1434564_at	2059	2.126	0.2779	Yes
29	AK2	1448450_at 1448451_at	2147	2.072	0.2814	Yes
30	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	2165	2.066	0.2882	Yes
31	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	2428	1.936	0.2832	Yes
32	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	2498	1.902	0.2870	Yes
33	HNRPR	1427129_a_at 1438807_at 1452030_a_at	2545	1.882	0.2917	Yes
34	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	2621	1.854	0.2950	Yes
35	NOLC1	1428869_at 1428870_at 1450087_a_at	2868	1.765	0.2901	Yes
36	POLE2	1427094_at 1431440_at	2947	1.735	0.2929	Yes
37	NRK	1436399_s_at 1450078_at 1450079_at	3138	1.668	0.2902	Yes
38	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	3218	1.646	0.2926	Yes
39	EPHB1	1455188_at	3367	1.598	0.2916	Yes
40	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	3406	1.589	0.2957	Yes
41	ACO2	1436934_s_at 1442102_at 1451002_at	3592	1.530	0.2927	No
42	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	3805	1.474	0.2884	No
43	MCM8	1429557_at	3854	1.456	0.2915	No
44	KBTBD7	1428192_at 1439865_at 1452700_s_at	4450	1.311	0.2689	No
45	MSH5	1430771_a_at 1449537_at	4541	1.291	0.2695	No
46	FBXO5	1429499_at	4803	1.237	0.2620	No
47	SLC25A3	1416300_a_at 1440302_at	4871	1.225	0.2634	No
48	PKMYT1	1418481_at 1438601_at	4959	1.207	0.2638	No
49	STAG2	1421849_at 1450396_at	5019	1.195	0.2654	No
50	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	5090	1.184	0.2665	No
51	POLD1	1448187_at 1456055_x_at	5538	1.101	0.2500	No
52	MCM3	1420029_at 1426653_at	5651	1.081	0.2488	No
53	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	5706	1.071	0.2502	No
54	GPRC5B	1424613_at 1451411_at	5972	1.030	0.2418	No
55	SFRS7	1424033_at 1424883_s_at 1436871_at	6480	0.955	0.2220	No
56	ORC1L	1422663_at 1443172_at	6487	0.954	0.2252	No
57	POLR2A	1422311_a_at 1426242_at 1458710_at	6566	0.943	0.2251	No
58	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	6626	0.932	0.2258	No
59	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	6672	0.924	0.2271	No
60	CORT	1449820_at	6799	0.907	0.2246	No
61	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	7006	0.874	0.2183	No
62	CLSPN	1441984_at 1456280_at	7017	0.872	0.2210	No
63	PAQR4	1423101_at	7051	0.867	0.2227	No
64	SEMA6A	1421414_a_at 1425903_at 1436458_at	7372	0.815	0.2109	No
65	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	7970	0.731	0.1862	No
66	GABRB3	1421189_at 1421190_at 1435021_at	8137	0.703	0.1811	No
67	PPM1D	1434142_at 1449092_at 1459069_at	8145	0.702	0.1833	No
68	PCSK1	1421396_at	8238	0.687	0.1816	No
69	BRMS1L	1452850_s_at 1460443_at	8273	0.683	0.1825	No
70	H2AFV	1428029_a_at 1436596_at	8307	0.677	0.1835	No
71	ARHGAP11A	1438434_at	8723	0.616	0.1667	No
72	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	8797	0.605	0.1655	No
73	STMN1	1415849_s_at	9253	0.538	0.1466	No
74	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	9658	0.482	0.1298	No
75	PIM1	1423006_at 1435458_at	9985	0.437	0.1164	No
76	CACNA1G	1423365_at	10623	0.347	0.0884	No
77	FANCC	1442265_at 1447632_at 1450861_at	10628	0.347	0.0895	No
78	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	10638	0.346	0.0903	No
79	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	11044	0.295	0.0728	No
80	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	11094	0.287	0.0716	No
81	GATA1	1449232_at	11198	0.270	0.0679	No
82	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	11503	0.226	0.0547	No
83	SALL1	1450489_at	11540	0.221	0.0539	No
84	CDT1	1424143_a_at 1424144_at 1455791_at	11602	0.212	0.0519	No
85	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	11636	0.207	0.0511	No
86	AP4M1	1418846_at	11901	0.166	0.0396	No
87	IPO7	1442511_at 1454955_at 1458165_at	12118	0.133	0.0301	No
88	KCNS2	1421342_at 1441211_at 1457325_at	12165	0.126	0.0285	No
89	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	12384	0.094	0.0188	No
90	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	12580	0.065	0.0101	No
91	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	12626	0.059	0.0082	No
92	PODN	1435180_at	12634	0.058	0.0081	No
93	SYNGR4	1418875_at	12953	0.006	-0.0065	No
94	MSH2	1416988_at 1447888_x_at	13177	-0.033	-0.0166	No
95	RASAL2	1436910_at 1444671_at	13347	-0.062	-0.0241	No
96	ADAMTS2	1435990_at 1455720_at 1457058_at	13373	-0.065	-0.0250	No
97	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	13742	-0.133	-0.0414	No
98	ILF3	1422546_at 1436802_at 1460669_at	13981	-0.175	-0.0517	No
99	HS6ST3	1421599_at	14034	-0.185	-0.0535	No
100	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	14231	-0.220	-0.0617	No
101	EED	1448653_at	14356	-0.244	-0.0665	No
102	RPS20	1456373_x_at 1456436_x_at	14512	-0.273	-0.0726	No
103	RRM2	1416120_at 1434437_x_at 1448226_at	14535	-0.276	-0.0726	No
104	HCN3	1451023_at	14545	-0.278	-0.0720	No
105	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	14552	-0.278	-0.0713	No
106	NELL2	1423560_at 1423561_at	14795	-0.328	-0.0812	No
107	CBX3	1432628_at 1454305_at	14878	-0.343	-0.0837	No
108	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	15028	-0.374	-0.0892	No
109	FHOD1	1435557_at	15035	-0.374	-0.0881	No
110	CDC6	1417019_a_at	15043	-0.376	-0.0870	No
111	FMO4	1425799_at 1444852_at	15078	-0.381	-0.0872	No
112	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	15092	-0.386	-0.0864	No
113	HOXC10	1439798_at	15095	-0.386	-0.0851	No
114	KCNA6	1421568_at 1441049_at 1456954_at	15118	-0.390	-0.0847	No
115	MCM2	1434079_s_at 1448777_at	15310	-0.431	-0.0919	No
116	TYRO3	1425248_a_at 1425249_a_at	15357	-0.445	-0.0924	No
117	E2F1	1417878_at 1431875_a_at 1447840_x_at	15380	-0.452	-0.0917	No
118	PRKDC	1451576_at	15548	-0.496	-0.0976	No
119	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	15690	-0.533	-0.1021	No
120	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	15730	-0.543	-0.1019	No
121	CCNT1	1419313_at 1456477_at	15780	-0.550	-0.1022	No
122	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	15820	-0.560	-0.1019	No
123	ATAD2	1436174_at 1443146_at 1443229_at	16401	-0.715	-0.1260	No
124	RAVER1	1427110_at 1427111_s_at 1444966_at	16760	-0.826	-0.1394	No
125	AP1S1	1416087_at	16818	-0.847	-0.1389	No
126	KLF5	1430255_at 1451021_a_at 1451739_at	17024	-0.910	-0.1450	No
127	DNAJC5G	1437814_at	17277	-0.991	-0.1530	No
128	SP3	1431804_a_at 1459360_at	17288	-0.996	-0.1498	No
129	ARID4A	1436191_at 1438464_at 1456420_at	17387	-1.026	-0.1506	No
130	HNRPD	1425142_a_at 1446083_at	17398	-1.029	-0.1473	No
131	HNRPUL1	1451984_at	17966	-1.263	-0.1687	No
132	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	18076	-1.306	-0.1690	No
133	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	18238	-1.380	-0.1714	No
134	PHF15	1430081_at 1455345_at	18295	-1.413	-0.1688	No
135	MYH10	1441057_at 1452740_at	18550	-1.535	-0.1749	No
136	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18654	-1.574	-0.1738	No
137	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	18680	-1.587	-0.1692	No
138	FANCG	1420960_at	18683	-1.587	-0.1635	No
139	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	18749	-1.634	-0.1606	No
140	USP37	1434242_at 1438212_at	18838	-1.688	-0.1584	No
141	CASP8AP2	1449217_at	18948	-1.755	-0.1571	No
142	CTCF	1418330_at 1449042_at	19005	-1.800	-0.1531	No
143	UGCGL1	1432318_at 1448009_at 1455839_at	19081	-1.848	-0.1498	No
144	ACBD6	1452601_a_at 1453199_at	19094	-1.855	-0.1436	No
145	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	19142	-1.898	-0.1388	No
146	TBX6	1449868_at	19258	-1.984	-0.1369	No
147	ZCCHC8	1423755_at 1441639_at	19661	-2.248	-0.1471	No
148	YBX2	1420762_a_at	19728	-2.310	-0.1418	No
149	IL4I1	1419192_at	19954	-2.535	-0.1429	No
150	ZBTB4	1429722_at 1460488_at	20319	-2.930	-0.1489	No
151	MXD3	1422970_at 1438847_at 1448878_at	20338	-2.963	-0.1389	No
152	ALDH6A1	1448104_at	20363	-2.992	-0.1291	No
153	STK35	1431107_at 1439802_at	20364	-2.993	-0.1182	No
154	MAZ	1427099_at	20396	-3.020	-0.1086	No
155	PHC1	1423212_at	20522	-3.189	-0.1028	No
156	FLI1	1422024_at 1433512_at 1441584_at	20689	-3.428	-0.0979	No
157	H2AFZ	1441370_at	21157	-4.282	-0.1037	No
158	PHF13	1455175_at	21226	-4.461	-0.0906	No
159	E2F7	1437187_at	21335	-4.748	-0.0783	No
160	USP52	1426700_a_at	21560	-5.702	-0.0678	No
161	SLCO3A1	1418030_at 1434537_at 1448918_at	21613	-5.996	-0.0483	No
162	DCK	1428838_a_at 1439012_a_at 1449176_a_at	21820	-8.499	-0.0268	No
163	ID3	1416630_at	21834	-8.786	0.0046	No