Details for gene set V$AML1

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AML1_01
Enrichment Score (ES)	-0.44617453
Normalized Enrichment Score (NES)	-1.7516412
Nominal p-value	0.0
FDR q-value	0.019390667
FWER p-Value	0.156

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EIF3S1	1426394_at 1426395_s_at 1452052_s_at	109	6.040	0.0126	No
2	EIF2B3	1434524_at	137	5.732	0.0280	No
3	TPM1	1423049_a_at 1423721_at 1447713_at 1456623_at	181	5.375	0.0417	No
4	FCER1G	1418340_at	566	3.826	0.0352	No
5	ACSL5	1428082_at	712	3.538	0.0388	No
6	MTX1	1418521_a_at 1418522_at 1447361_at	721	3.519	0.0487	No
7	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	819	3.338	0.0540	No
8	INPPL1	1460394_a_at	878	3.232	0.0607	No
9	HDGF	1415888_at 1419964_s_at 1449681_at	953	3.111	0.0664	No
10	NGB	1417996_at 1417997_at	1071	2.976	0.0697	No
11	PTK9	1420873_at 1420874_at 1420875_at	1202	2.815	0.0719	No
12	SLC15A3	1420697_at	1221	2.799	0.0792	No
13	RCOR2	1417302_at	1256	2.758	0.0857	No
14	PDZK1	1431701_a_at	1310	2.713	0.0912	No
15	AKAP3	1421531_at 1456591_x_at	1390	2.640	0.0952	No
16	BCAR3	1415936_at 1431564_at	1962	2.183	0.0753	No
17	THBS3	1416623_at	1991	2.164	0.0803	No
18	VRK1	1425006_a_at 1458951_at	2279	2.010	0.0730	No
19	PDE3B	1433694_at	2557	1.877	0.0657	No
20	MYOD1	1418420_at 1447675_x_at	2906	1.749	0.0548	No
21	DIABLO	1417683_at 1425768_at	3046	1.700	0.0534	No
22	ADAMTS4	1452595_at	3426	1.585	0.0406	No
23	FOXD2	1450289_at	3618	1.522	0.0362	No
24	ARHGAP21	1428368_at 1428369_s_at 1445628_at 1447206_at	3657	1.511	0.0389	No
25	SUPT16H	1419741_at 1449578_at 1456449_at	3684	1.505	0.0421	No
26	COL9A2	1450673_at	4075	1.399	0.0282	No
27	RAB39	1437762_at	4204	1.371	0.0263	No
28	RIN1	1424507_at 1437460_x_at	4275	1.358	0.0271	No
29	LUZP1	1416469_at 1448352_at	4294	1.353	0.0302	No
30	BTG4	1426520_at	4690	1.257	0.0157	No
31	NUCB2	1418355_at	4950	1.209	0.0073	No
32	JDP2	1424972_at 1450350_a_at	5025	1.193	0.0074	No
33	KCNJ1	1418613_at 1418614_at	5444	1.119	-0.0086	No
34	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	5491	1.109	-0.0075	No
35	SCN3B	1426328_a_at 1435767_at	5563	1.095	-0.0075	No
36	BLOC1S2	1429048_at	5617	1.087	-0.0068	No
37	HOXC6	1427361_at 1427362_x_at 1427454_at	5641	1.083	-0.0047	No
38	LY9	1449156_at	5786	1.058	-0.0083	No
39	SCEL	1422837_at 1459426_at	5815	1.054	-0.0065	No
40	SLITRK5	1429718_at	5908	1.040	-0.0077	No
41	WNT8B	1421439_at	6095	1.010	-0.0133	No
42	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	6125	1.006	-0.0117	No
43	COL4A2	1424051_at	6179	1.000	-0.0112	No
44	TBX5	1425694_at 1425695_at	6247	0.990	-0.0114	No
45	VIM	1438118_x_at 1450641_at 1456292_a_at	6269	0.987	-0.0095	No
46	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6618	0.934	-0.0228	No
47	IFNG	1425947_at	6815	0.904	-0.0292	No
48	MAMDC1	1442206_at 1442561_at 1445372_at 1458147_at	6861	0.899	-0.0286	No
49	GRK5	1446361_at 1446998_at 1449514_at	7153	0.851	-0.0395	No
50	STRC	1421695_at	7177	0.846	-0.0381	No
51	POU2F1	1419716_a_at 1427695_a_at 1427835_at	7332	0.821	-0.0428	No
52	NAV3	1459440_at	7492	0.797	-0.0478	No
53	GTF2A1	1421357_at	7527	0.792	-0.0470	No
54	HOXC4	1422870_at	7807	0.753	-0.0577	No
55	SCN8A	1423515_at 1439889_at 1442208_at 1451894_a_at 1457412_at 1458693_at	7848	0.747	-0.0573	No
56	SLC6A9	1417636_at 1431812_a_at	7943	0.734	-0.0595	No
57	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	7970	0.731	-0.0586	No
58	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	8208	0.692	-0.0675	No
59	CYP17A1	1417017_at	8279	0.681	-0.0687	No
60	PDZRN4	1456512_at	8321	0.675	-0.0686	No
61	RAB30	1426452_a_at	8464	0.655	-0.0732	No
62	ANXA8	1417732_at 1425789_s_at	8475	0.653	-0.0718	No
63	KCTD4	1420537_at 1441801_at	8551	0.640	-0.0734	No
64	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	8589	0.635	-0.0732	No
65	CRTAC1	1426606_at 1452936_at 1457474_at 1459858_x_at	8793	0.606	-0.0808	No
66	PRICKLE1	1441663_at 1442172_at 1442400_at 1444759_at 1452249_at 1457637_at	9095	0.562	-0.0930	No
67	PGF	1418471_at	9181	0.550	-0.0953	No
68	RGS1	1417601_at	9218	0.544	-0.0954	No
69	BMF	1422995_at 1454880_s_at 1458325_x_at	9568	0.494	-0.1100	No
70	TLL2	1421526_at	9819	0.459	-0.1201	No
71	ADAMTS8	1418270_at 1444174_at	10339	0.392	-0.1429	No
72	ANKRD1	1420991_at 1420992_at	10342	0.391	-0.1418	No
73	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	10365	0.388	-0.1417	No
74	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	10504	0.367	-0.1470	No
75	RICS	1438451_at 1447099_at	10703	0.338	-0.1551	No
76	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	10821	0.324	-0.1595	No
77	UBL3	1423461_a_at	10985	0.301	-0.1661	No
78	DAB1	1421100_a_at 1427307_a_at 1427308_at 1435577_at 1435578_s_at	11049	0.294	-0.1682	No
79	ZBTB8	1455193_at	11359	0.246	-0.1817	No
80	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	11557	0.219	-0.1901	No
81	FGF4	1420085_at 1420086_x_at 1449729_at 1450282_at	11615	0.211	-0.1921	No
82	COL4A1	1426348_at 1452035_at	12102	0.135	-0.2140	No
83	TNFSF4	1421744_at	12198	0.120	-0.2181	No
84	HLX1	1418939_at	12221	0.116	-0.2187	No
85	GPD1	1416204_at 1439396_x_at 1448249_at 1456732_at	12289	0.107	-0.2215	No
86	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	12390	0.092	-0.2258	No
87	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	12434	0.088	-0.2275	No
88	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	12645	0.057	-0.2370	No
89	LMO3	1455754_at	12775	0.036	-0.2429	No
90	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	13113	-0.022	-0.2583	No
91	RASAL2	1436910_at 1444671_at	13347	-0.062	-0.2688	No
92	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	13396	-0.070	-0.2708	No
93	NDUFA9	1416663_at	13420	-0.074	-0.2717	No
94	HIPK1	1421298_a_at 1424540_at 1457515_at	13504	-0.088	-0.2752	No
95	RGS18	1420398_at 1449856_at	13514	-0.089	-0.2754	No
96	SCNN1A	1425088_at	13665	-0.116	-0.2819	No
97	CLDN10	1426147_s_at	13672	-0.119	-0.2819	No
98	CTSK	1450652_at	13819	-0.146	-0.2881	No
99	DNM3	1425403_at 1436624_at 1436875_at 1438801_at 1445540_at 1446265_at 1446431_at 1446694_at 1457405_at	13965	-0.172	-0.2943	No
100	MMP13	1417256_at	14001	-0.178	-0.2954	No
101	ARNT	1419996_s_at 1421721_a_at 1425064_at 1437042_at 1449696_at	14042	-0.186	-0.2967	No
102	MATN1	1418477_at	14063	-0.189	-0.2971	No
103	TNNT2	1418726_a_at 1424967_x_at 1440424_at	14148	-0.204	-0.3003	No
104	NRAS	1422688_a_at 1454060_a_at	14223	-0.219	-0.3031	No
105	MKRN3	1418160_at	14406	-0.253	-0.3107	No
106	ATP6V0B	1416769_s_at 1425448_x_at 1437013_x_at	14457	-0.263	-0.3123	No
107	TACSTD2	1423323_at	14755	-0.319	-0.3250	No
108	PTPN22	1417995_at 1442820_at	14769	-0.322	-0.3246	No
109	NFRKB	1434753_at 1445551_at	14825	-0.334	-0.3262	No
110	TITF1	1422346_at	14890	-0.346	-0.3281	No
111	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	15039	-0.376	-0.3338	No
112	IL23A	1419529_at	15040	-0.376	-0.3328	No
113	LMO2	1454086_a_at	15077	-0.381	-0.3333	No
114	ITGA10	1440235_at	15198	-0.405	-0.3376	No
115	MMP14	1416572_at 1448383_at	15390	-0.454	-0.3451	No
116	GZMB	1419060_at	15478	-0.475	-0.3477	No
117	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	15482	-0.475	-0.3465	No
118	RDH5	1418808_at 1421702_at	15646	-0.520	-0.3524	No
119	MOAP1	1431823_at 1448787_at	15707	-0.537	-0.3536	No
120	DKK1	1420360_at 1458232_at	15826	-0.561	-0.3574	No
121	ENTPD1	1423326_at 1450939_at 1453586_at	15853	-0.566	-0.3570	No
122	SIRT1	1418640_at 1458538_at	16079	-0.623	-0.3655	No
123	ARHGAP12	1431052_at 1444463_at 1451525_at 1451526_at	16143	-0.641	-0.3665	No
124	GPATC2	1420528_at 1440329_s_at 1445189_at 1452498_at 1458566_at	16469	-0.737	-0.3793	No
125	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	16532	-0.755	-0.3800	No
126	ABCD4	1419572_a_at 1427829_at	16652	-0.796	-0.3831	No
127	MR1	1421898_a_at 1421899_a_at	16732	-0.818	-0.3844	No
128	IBRDC3	1432478_a_at 1435226_at	16817	-0.847	-0.3858	No
129	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	16850	-0.856	-0.3848	No
130	MPL	1421461_at 1451919_a_at	16877	-0.862	-0.3834	No
131	EDARADD	1421213_at 1433132_at 1433133_at 1437800_at	17493	-1.061	-0.4086	No
132	AGTRL1	1423037_at 1438651_a_at	18119	-1.321	-0.4335	No
133	PDE6H	1450765_a_at 1450766_at	18135	-1.329	-0.4303	No
134	TBK1	1422469_at 1445571_at 1460315_s_at	18480	-1.506	-0.4418	Yes
135	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	18577	-1.545	-0.4417	Yes
136	SFRS4	1448778_at	18640	-1.569	-0.4400	Yes
137	KIF1B	1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at	18709	-1.603	-0.4384	Yes
138	BLOC1S1	1422614_s_at	18772	-1.654	-0.4364	Yes
139	PXN	1424027_at 1426085_a_at 1456135_s_at	18885	-1.708	-0.4366	Yes
140	MRPS31	1417737_at 1443165_at	18976	-1.781	-0.4356	Yes
141	RHOG	1422572_at	19155	-1.907	-0.4382	Yes
142	CBL	1434829_at 1446608_at 1450457_at 1455886_at	19174	-1.920	-0.4334	Yes
143	SNX1	1416260_a_at	19339	-2.037	-0.4350	Yes
144	RASGEF1A	1429316_at 1435218_at	19402	-2.070	-0.4319	Yes
145	ACIN1	1416568_a_at 1421197_a_at	19613	-2.207	-0.4351	Yes
146	BATF	1419410_at	19617	-2.210	-0.4288	Yes
147	DDX23	1430050_at	19777	-2.356	-0.4292	Yes
148	SLC12A6	1436989_s_at 1449878_a_at 1458916_at	19824	-2.405	-0.4243	Yes
149	RAB5B	1422119_at 1437446_at	19908	-2.487	-0.4209	Yes
150	GRASP	1441894_s_at 1442616_at 1460206_at	19988	-2.567	-0.4171	Yes
151	SLC37A4	1417042_at	20027	-2.606	-0.4112	Yes
152	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	20052	-2.630	-0.4047	Yes
153	ITGB7	1418741_at	20104	-2.701	-0.3992	Yes
154	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	20195	-2.793	-0.3952	Yes
155	AP1G2	1419113_at	20302	-2.913	-0.3915	Yes
156	SCN2B	1430648_at 1436134_at 1457144_at	20405	-3.030	-0.3874	Yes
157	FLI1	1422024_at 1433512_at 1441584_at	20689	-3.428	-0.3904	Yes
158	EIF2C1	1434331_at	20737	-3.500	-0.3824	Yes
159	MAP3K11	1450669_at	20827	-3.653	-0.3759	Yes
160	PACS1	1420112_at 1435762_at 1440014_at 1449737_at 1459707_at	20854	-3.690	-0.3663	Yes
161	ATF7IP	1446323_at 1449192_at 1454973_at 1459096_at	20948	-3.822	-0.3594	Yes
162	EMP1	1416529_at 1459171_at	20981	-3.886	-0.3496	Yes
163	MIZF	1440255_at	21097	-4.134	-0.3428	Yes
164	XCL1	1419412_at	21123	-4.192	-0.3318	Yes
165	DGKA	1418578_at	21145	-4.248	-0.3204	Yes
166	TACC2	1425745_a_at 1447891_at	21160	-4.286	-0.3085	Yes
167	DACT1	1417937_at	21190	-4.377	-0.2971	Yes
168	CAP1	1417461_at 1417462_at	21432	-5.083	-0.2934	Yes
169	NOTCH2	1451889_at 1455556_at	21434	-5.088	-0.2786	Yes
170	S100A9	1448756_at	21440	-5.136	-0.2639	Yes
171	CD6	1451910_a_at	21522	-5.490	-0.2516	Yes
172	CD69	1428735_at	21580	-5.830	-0.2373	Yes
173	RORC	1425792_a_at 1425793_a_at	21592	-5.874	-0.2207	Yes
174	RAG1	1440574_at 1450680_at	21599	-5.911	-0.2037	Yes
175	MADD	1425735_at 1455502_at	21632	-6.088	-0.1875	Yes
176	STAT2	1421911_at 1450403_at	21693	-6.619	-0.1710	Yes
177	DNAJC14	1426553_at 1437546_at 1437547_s_at	21705	-6.772	-0.1517	Yes
178	NR4A1	1416505_at	21771	-7.733	-0.1322	Yes
179	SLC37A2	1452492_a_at	21777	-7.814	-0.1097	Yes
180	CRY1	1433733_a_at	21790	-8.029	-0.0868	Yes
181	ID3	1416630_at	21834	-8.786	-0.0632	Yes
182	SEMA4A	1438934_x_at 1448110_at	21887	-10.823	-0.0341	Yes
183	EGR2	1427682_a_at 1427683_at	21928	-12.431	0.0003	Yes