Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | CCAWWNAAGG_V$SRF_Q4 |
| Enrichment Score (ES) | -0.61653036 |
| Normalized Enrichment Score (NES) | -2.1028006 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0012748793 |
| FWER p-Value | 0.0020 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | TCF4 | 1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at | 1893 | 2.223 | -0.0704 | No | ||
| 2 | CKM | 1417614_at | 2272 | 2.014 | -0.0731 | No | ||
| 3 | FOSB | 1422134_at | 2565 | 1.874 | -0.0728 | No | ||
| 4 | EPHB1 | 1455188_at | 3367 | 1.598 | -0.0979 | No | ||
| 5 | DEFB129 | 1440957_at | 3692 | 1.503 | -0.1018 | No | ||
| 6 | MAPKAPK2 | 1426648_at | 4175 | 1.378 | -0.1138 | No | ||
| 7 | ANP32E | 1420592_a_at 1447680_at | 4349 | 1.339 | -0.1120 | No | ||
| 8 | KCTD15 | 1435339_at | 4496 | 1.300 | -0.1092 | No | ||
| 9 | SCN3B | 1426328_a_at 1435767_at | 5563 | 1.095 | -0.1500 | No | ||
| 10 | CALD1 | 1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at | 5586 | 1.092 | -0.1431 | No | ||
| 11 | PLCB3 | 1448661_at | 5728 | 1.067 | -0.1418 | No | ||
| 12 | RARB | 1454906_at | 6055 | 1.017 | -0.1493 | No | ||
| 13 | VIT | 1426231_at | 6153 | 1.002 | -0.1465 | No | ||
| 14 | MRVI1 | 1422245_a_at 1459665_s_at | 6751 | 0.913 | -0.1671 | No | ||
| 15 | SCOC | 1416267_at 1430999_a_at | 6881 | 0.895 | -0.1665 | No | ||
| 16 | SFRS12 | 1427134_at 1427135_at 1427136_s_at 1458056_at | 7006 | 0.874 | -0.1659 | No | ||
| 17 | HOXD13 | 1422239_at 1440626_at | 7256 | 0.832 | -0.1712 | No | ||
| 18 | MYL7 | 1449071_at | 7920 | 0.736 | -0.1962 | No | ||
| 19 | H3F3A | 1423263_at 1442087_at | 8042 | 0.720 | -0.1965 | No | ||
| 20 | RAB30 | 1426452_a_at | 8464 | 0.655 | -0.2110 | No | ||
| 21 | NPAS2 | 1421036_at 1421037_at | 8496 | 0.649 | -0.2077 | No | ||
| 22 | NKX2-2 | 1421112_at | 8544 | 0.641 | -0.2052 | No | ||
| 23 | SDPR | 1416778_at 1416779_at 1443832_s_at | 8627 | 0.630 | -0.2043 | No | ||
| 24 | NKX6-1 | 1425828_at | 8776 | 0.608 | -0.2067 | No | ||
| 25 | INSM1 | 1421399_at 1455865_at | 9202 | 0.547 | -0.2222 | No | ||
| 26 | SRF | 1418255_s_at 1418256_at | 9517 | 0.501 | -0.2329 | No | ||
| 27 | TAGLN | 1423505_at | 10992 | 0.301 | -0.2981 | No | ||
| 28 | PLN | 1423359_at 1450952_at 1460332_at | 11065 | 0.292 | -0.2993 | No | ||
| 29 | TNNC1 | 1418370_at | 11289 | 0.257 | -0.3076 | No | ||
| 30 | NPPA | 1456062_at | 11505 | 0.225 | -0.3158 | No | ||
| 31 | SP7 | 1418425_at | 11600 | 0.213 | -0.3186 | No | ||
| 32 | TRDN | 1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at | 11654 | 0.204 | -0.3195 | No | ||
| 33 | MYH11 | 1418122_at 1448962_at | 12555 | 0.069 | -0.3602 | No | ||
| 34 | PODN | 1435180_at | 12634 | 0.058 | -0.3633 | No | ||
| 35 | PRDM1 | 1420425_at 1444997_at | 12655 | 0.055 | -0.3638 | No | ||
| 36 | ATRX | 1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at | 12703 | 0.047 | -0.3656 | No | ||
| 37 | CORO1C | 1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at | 13396 | -0.070 | -0.3968 | No | ||
| 38 | TPM2 | 1419738_a_at 1419739_at 1425028_a_at 1449577_x_at | 13473 | -0.082 | -0.3997 | No | ||
| 39 | UBE2C | 1452954_at | 13566 | -0.097 | -0.4032 | No | ||
| 40 | DIXDC1 | 1425256_a_at 1435207_at 1443957_at 1444395_at | 13602 | -0.103 | -0.4040 | No | ||
| 41 | MRGPRF | 1425894_at | 14123 | -0.200 | -0.4263 | No | ||
| 42 | TITF1 | 1422346_at | 14890 | -0.346 | -0.4589 | No | ||
| 43 | ERBB2IP | 1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at | 15028 | -0.374 | -0.4624 | No | ||
| 44 | HOXD10 | 1418606_at | 15128 | -0.391 | -0.4641 | No | ||
| 45 | PPP1R12A | 1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at | 15176 | -0.400 | -0.4634 | No | ||
| 46 | CFL2 | 1418066_at 1418067_at 1431432_at | 15248 | -0.416 | -0.4636 | No | ||
| 47 | SVIL | 1427662_at 1460694_s_at 1460735_at | 15863 | -0.568 | -0.4875 | No | ||
| 48 | HOXC5 | 1439885_at 1450832_at 1456301_at | 16222 | -0.663 | -0.4991 | No | ||
| 49 | FGFRL1 | 1447878_s_at 1451912_a_at | 16708 | -0.811 | -0.5154 | No | ||
| 50 | DAPK3 | 1423446_at 1456496_at | 17556 | -1.088 | -0.5462 | No | ||
| 51 | MYLK | 1425504_at 1425505_at 1425506_at | 18283 | -1.406 | -0.5692 | No | ||
| 52 | KCNK3 | 1425341_at 1425342_a_at 1426058_a_at | 18495 | -1.512 | -0.5679 | No | ||
| 53 | MBNL1 | 1416904_at 1439686_at 1440315_at 1445106_at 1457924_at | 19560 | -2.171 | -0.6008 | Yes | ||
| 54 | PFN1 | 1449018_at | 19696 | -2.277 | -0.5904 | Yes | ||
| 55 | PICALM | 1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at | 20195 | -2.793 | -0.5929 | Yes | ||
| 56 | ACTA1 | 1427735_a_at | 20245 | -2.852 | -0.5744 | Yes | ||
| 57 | ACTB | 1419734_at 1436722_a_at 1440365_at AFFX-b-ActinMur/M12481_3_at AFFX-b-ActinMur/M12481_5_at AFFX-b-ActinMur/M12481_M_at | 20277 | -2.880 | -0.5549 | Yes | ||
| 58 | ACTG2 | 1422340_a_at | 20310 | -2.918 | -0.5352 | Yes | ||
| 59 | CSRP1 | 1425810_a_at 1425811_a_at | 20752 | -3.526 | -0.5297 | Yes | ||
| 60 | PHF12 | 1434922_at 1453579_at | 21235 | -4.496 | -0.5191 | Yes | ||
| 61 | RUNDC1 | 1454829_at | 21331 | -4.737 | -0.4890 | Yes | ||
| 62 | RASSF2 | 1428392_at 1444889_at | 21481 | -5.310 | -0.4573 | Yes | ||
| 63 | FLNA | 1426677_at | 21604 | -5.948 | -0.4197 | Yes | ||
| 64 | PCDH7 | 1427592_at 1437442_at 1449249_at 1456214_at | 21609 | -5.972 | -0.3765 | Yes | ||
| 65 | DUSP5 | 1437199_at | 21667 | -6.307 | -0.3333 | Yes | ||
| 66 | DUSP2 | 1450698_at | 21723 | -6.910 | -0.2856 | Yes | ||
| 67 | NR4A1 | 1416505_at | 21771 | -7.733 | -0.2315 | Yes | ||
| 68 | EGR1 | 1417065_at | 21855 | -9.280 | -0.1679 | Yes | ||
| 69 | LSP1 | 1417756_a_at | 21894 | -11.171 | -0.0885 | Yes | ||
| 70 | EGR2 | 1427682_a_at 1427683_at | 21928 | -12.431 | 0.0003 | Yes |
