Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	PENG_RAPAMYCIN_DN
Enrichment Score (ES)	0.49945652
Normalized Enrichment Score (NES)	2.185743
Nominal p-value	0.0
FDR q-value	9.617531E-4
FWER p-Value	0.0040

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TCP1	1442317_at 1448122_at	7	9.127	0.0229	Yes
2	TOMM40	1426118_a_at 1459680_at	44	7.295	0.0397	Yes
3	AMD1	1448484_at	56	7.018	0.0570	Yes
4	CYCS	1422484_at 1445484_at	57	6.950	0.0747	Yes
5	SLC29A1	1451782_a_at	59	6.923	0.0922	Yes
6	DDX21	1448270_at 1448271_a_at	78	6.474	0.1079	Yes
7	SLC7A5	1418326_at	80	6.452	0.1242	Yes
8	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	90	6.305	0.1398	Yes
9	NOL5A	1426533_at 1455035_s_at	98	6.200	0.1552	Yes
10	ETFA	1423972_at	100	6.170	0.1708	Yes
11	CCT6A	1423517_at 1455988_a_at	145	5.660	0.1832	Yes
12	TRIP13	1429294_at 1429295_s_at 1446760_at	163	5.509	0.1964	Yes
13	RARS	1416312_at	172	5.436	0.2098	Yes
14	CTPS	1416563_at	178	5.392	0.2233	Yes
15	CCT5	1417258_at	238	5.073	0.2335	Yes
16	CTSC	1416382_at 1437939_s_at 1446834_at	260	4.962	0.2451	Yes
17	ATF5	1425927_a_at	280	4.852	0.2566	Yes
18	MRPL12	1452048_at	298	4.780	0.2679	Yes
19	SRM	1421260_a_at	302	4.756	0.2799	Yes
20	NARS	1428666_at 1452866_at	317	4.696	0.2911	Yes
21	SQLE	1415993_at	357	4.545	0.3009	Yes
22	SF3A3	1423811_at	388	4.408	0.3107	Yes
23	RTCD1	1424095_at	439	4.199	0.3191	Yes
24	GOT2	1417715_a_at 1417716_at	458	4.154	0.3288	Yes
25	TARS	1460323_at	469	4.124	0.3388	Yes
26	TIMM17A	1426256_at	493	4.032	0.3480	Yes
27	UBE2L3	1417907_at 1417908_s_at 1448879_at 1448880_at	538	3.891	0.3559	Yes
28	MORF4L2	1415778_at 1439413_x_at	627	3.693	0.3612	Yes
29	PRDX3	1416292_at	711	3.539	0.3664	Yes
30	EIF3S9	1426674_at	735	3.491	0.3742	Yes
31	GTF2A2	1433528_at	751	3.461	0.3823	Yes
32	CDK4	1422441_x_at	773	3.431	0.3900	Yes
33	DDX3X	1416467_at 1423042_at 1423043_s_at	799	3.368	0.3974	Yes
34	NOL1	1424019_at	843	3.287	0.4038	Yes
35	CCT2	1416037_a_at 1433534_a_at 1433535_x_at	887	3.219	0.4100	Yes
36	RNU3IP2	1451293_at	963	3.100	0.4144	Yes
37	PSMD5	1423234_at	1085	2.964	0.4164	Yes
38	HSPE1	1450668_s_at	1159	2.872	0.4203	Yes
39	CYC1	1416604_at	1168	2.860	0.4272	Yes
40	CDC25A	1417131_at 1417132_at 1445995_at	1192	2.824	0.4333	Yes
41	CHUK	1417091_at 1428210_s_at 1451383_a_at	1214	2.804	0.4395	Yes
42	ETF1	1420023_at 1420024_s_at 1424013_at 1440629_at 1451208_at	1235	2.779	0.4456	Yes
43	CSE1L	1448809_at	1291	2.731	0.4500	Yes
44	EIF4G2	1415863_at 1452758_s_at	1293	2.730	0.4569	Yes
45	RABGGTB	1419553_a_at	1384	2.646	0.4595	Yes
46	IDH3A	1422500_at 1422501_s_at 1432016_a_at 1447701_x_at	1432	2.585	0.4639	Yes
47	DNAJA1	1416288_at 1437220_x_at 1445729_at 1459835_s_at 1460179_at	1474	2.546	0.4685	Yes
48	SCD	1415964_at 1415965_at	1628	2.405	0.4676	Yes
49	POLR2B	1433552_a_at	1679	2.370	0.4713	Yes
50	MARS	1455951_at	1694	2.362	0.4767	Yes
51	P2RX5	1449433_at	1995	2.163	0.4684	Yes
52	GLO1	1424108_at 1424109_a_at 1436070_at 1451240_a_at	2015	2.146	0.4729	Yes
53	AK2	1448450_at 1448451_at	2147	2.072	0.4722	Yes
54	NDUFS3	1423737_at	2167	2.064	0.4766	Yes
55	AHSA1	1424147_at 1444500_at	2243	2.028	0.4783	Yes
56	PHB	1435144_at 1442233_at 1448563_at	2277	2.011	0.4818	Yes
57	YARS	1460638_at	2291	2.005	0.4863	Yes
58	HSPA5	1416064_a_at 1427464_s_at 1447824_x_at	2347	1.974	0.4888	Yes
59	MRPS12	1448799_s_at	2475	1.912	0.4878	Yes
60	AATF	1432394_a_at 1439676_at 1441722_at 1447459_at	2485	1.910	0.4923	Yes
61	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	2498	1.902	0.4966	Yes
62	ATP1B3	1423126_at	2685	1.830	0.4927	Yes
63	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	2871	1.764	0.4886	Yes
64	PSMD8	1423296_at	2956	1.733	0.4892	Yes
65	SDHB	1418005_at	3037	1.703	0.4898	Yes
66	XPO6	1422759_a_at 1440492_at 1443737_at	3064	1.694	0.4929	Yes
67	NP	1416530_a_at	3203	1.653	0.4908	Yes
68	FASN	1423828_at	3229	1.642	0.4938	Yes
69	SSBP1	1427965_at 1430294_at 1444053_at 1452616_s_at 1452617_at	3328	1.614	0.4934	Yes
70	GM2A	1416188_at 1448241_at	3363	1.599	0.4959	Yes
71	HCCS	1420889_at 1420890_at	3375	1.596	0.4995	Yes
72	ASNS	1433966_x_at 1451095_at	3957	1.431	0.4764	No
73	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	3965	1.430	0.4797	No
74	EBP	1416667_at	4466	1.308	0.4600	No
75	WNT10B	1426091_a_at	4498	1.300	0.4619	No
76	ACVRL1	1435825_at 1451604_a_at	4549	1.290	0.4629	No
77	COPB2	1452102_at 1456175_a_at	4707	1.255	0.4589	No
78	CAPZA2	1423057_at 1423058_at	4863	1.226	0.4549	No
79	SLC3A2	1425364_a_at	4867	1.225	0.4578	No
80	PFKM	1416780_at	5005	1.198	0.4546	No
81	WBSCR22	1423575_a_at	5217	1.161	0.4478	No
82	PPP2R2A	1429715_at 1437730_at 1453260_a_at	5335	1.138	0.4453	No
83	BCS1L	1451541_at	5341	1.137	0.4480	No
84	HSPA4	1416146_at 1416147_at 1440575_at	5476	1.112	0.4447	No
85	MYCBP	1421165_at 1427938_at 1427939_s_at 1427940_s_at 1452608_at	5621	1.086	0.4408	No
86	ARMET	1428112_at 1459455_at	5831	1.050	0.4339	No
87	S100A4	1424542_at	5878	1.044	0.4344	No
88	ADRM1	1419263_a_at 1438170_x_at	6018	1.023	0.4306	No
89	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	6032	1.021	0.4326	No
90	PPIF	1416940_at 1438955_x_at	6254	0.990	0.4250	No
91	IFI30	1422476_at	6984	0.877	0.3937	No
92	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	7235	0.836	0.3843	No
93	NMT1	1415683_at 1418082_at 1454941_at	7294	0.826	0.3838	No
94	NME1	1424110_a_at 1435277_x_at	7443	0.804	0.3790	No
95	RPS26	1415876_a_at	7447	0.803	0.3809	No
96	POLR2F	1415754_at 1427402_at	7473	0.800	0.3818	No
97	BYSL	1422767_at 1450742_at	7503	0.795	0.3825	No
98	EIF2B2	1434538_x_at 1437428_x_at 1451136_a_at	7623	0.778	0.3790	No
99	TUBG1	1417144_at	7867	0.744	0.3697	No
100	ATP5G3	1454661_at	8049	0.719	0.3632	No
101	BTK	1422755_at	8127	0.705	0.3615	No
102	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	8833	0.599	0.3306	No
103	PTDSS1	1416372_at 1441866_s_at 1449739_at	9084	0.565	0.3205	No
104	GORASP2	1424710_a_at 1442825_at 1460460_a_at	9104	0.560	0.3211	No
105	EIF4G1	1427036_a_at 1427037_at 1438686_at	9315	0.529	0.3128	No
106	RNASEH1	1453833_a_at	9516	0.502	0.3049	No
107	RAB1A	1416082_at 1448210_at 1457537_at	9776	0.465	0.2942	No
108	RAB14	1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at	10025	0.431	0.2839	No
109	UCHL1	1448260_at	10304	0.397	0.2721	No
110	USP10	1448230_at	10334	0.392	0.2717	No
111	ACAT2	1435630_s_at	10353	0.390	0.2719	No
112	PSMB5	1415676_a_at	10566	0.356	0.2631	No
113	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	10595	0.352	0.2627	No
114	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	10990	0.301	0.2453	No
115	BCAP31	1451049_at 1456279_a_at	11057	0.293	0.2431	No
116	DHCR24	1418129_at 1451895_a_at	11264	0.260	0.2342	No
117	EMP3	1417104_at	11276	0.259	0.2344	No
118	JTB	1424283_at	11311	0.252	0.2335	No
119	CD47	1419554_at 1428187_at 1430997_at 1449507_a_at 1458634_at 1459908_at	11402	0.240	0.2299	No
120	SAFB	1432911_at 1454415_at 1454928_at 1454929_s_at	12063	0.141	0.2000	No
121	CCNC	1417861_at 1428570_at 1454144_a_at 1454336_at	12320	0.102	0.1885	No
122	EIF2B4	1449940_a_at	12364	0.097	0.1867	No
123	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	12580	0.065	0.1770	No
124	GCDH	1448717_at	12605	0.063	0.1761	No
125	BMP1	1426238_at 1427457_a_at 1427458_at 1446007_at	12648	0.057	0.1743	No
126	PPIB	1437649_x_at 1450911_at	12906	0.017	0.1625	No
127	NDUFA9	1416663_at	13420	-0.074	0.1391	No
128	MLF2	1423916_s_at	13494	-0.086	0.1360	No
129	FKBP4	1416362_a_at 1416363_at 1458729_at 1459808_at	13985	-0.176	0.1139	No
130	LDHB	1416183_a_at 1434499_a_at 1442618_at 1448237_x_at 1455235_x_at	14067	-0.190	0.1107	No
131	NXF1	1416791_a_at	14608	-0.289	0.0866	No
132	KPNA3	1421828_at 1445527_at 1446538_at 1450385_at 1450386_at	14867	-0.341	0.0756	No
133	PTRF	1421431_at 1424130_a_at 1453891_at	14953	-0.359	0.0726	No
134	PTBP1	1424874_a_at 1450443_at 1458284_at	15242	-0.414	0.0604	No
135	COX11	1429188_at 1457846_at	15306	-0.430	0.0586	No
136	GCN5L2	1422971_at 1422972_s_at 1426783_at	15474	-0.473	0.0522	No
137	ICT1	1444276_at 1460308_a_at	15507	-0.481	0.0519	No
138	DAP3	1450848_at	15675	-0.528	0.0456	No
139	TIMM44	1417670_at 1439371_x_at 1448801_a_at	16051	-0.616	0.0299	No
140	PTPN1	1417068_a_at 1438670_at	16225	-0.665	0.0237	No
141	CCT4	1415867_at 1415868_at 1430034_at 1433447_x_at 1438560_x_at 1442569_at 1456082_x_at 1456572_x_at	16837	-0.852	-0.0023	No
142	HYOU1	1423290_at 1423291_s_at 1451913_a_at	17089	-0.933	-0.0114	No
143	ARF1	1420920_a_at 1426390_a_at	17767	-1.181	-0.0395	No
144	UBE2M	1424345_s_at 1425858_at	17784	-1.190	-0.0372	No
145	MMP15	1422597_at 1437462_x_at 1439734_at	17833	-1.205	-0.0364	No
146	CHERP	1431770_at 1436885_a_at 1451896_a_at	17866	-1.221	-0.0348	No
147	LIMK2	1418581_a_at 1439896_at 1452060_a_at 1458628_at	17897	-1.234	-0.0330	No
148	WDR18	1433635_at 1443758_at 1454695_at 1460622_x_at	17930	-1.247	-0.0313	No
149	SLC39A14	1425649_at 1427035_at 1438490_at 1457770_at	18104	-1.313	-0.0359	No
150	IDH3B	1418885_a_at 1418886_s_at 1441271_at	18108	-1.315	-0.0327	No
151	ID2	1422537_a_at 1435176_a_at 1453596_at	18268	-1.399	-0.0365	No
152	MAPKAPK3	1434815_a_at 1437494_at	18376	-1.449	-0.0377	No
153	PITPNB	1420307_a_at 1421013_at 1434257_s_at 1454892_at	18987	-1.788	-0.0612	No
154	ATP6V0C	1416392_a_at 1435732_x_at 1438925_x_at	19378	-2.059	-0.0739	No
155	GTF3C1	1434066_at 1438425_at 1456024_at 1459673_at	19391	-2.067	-0.0692	No
156	EBNA1BP2	1428315_at 1437512_x_at 1439898_at 1457668_x_at	19500	-2.128	-0.0688	No
157	ATP6V0E	1416328_a_at	19616	-2.210	-0.0684	No
158	HADH2	1438391_x_at 1448286_at	19726	-2.306	-0.0676	No
159	TGDS	1424526_a_at	19795	-2.375	-0.0647	No
160	ALDH4A1	1452375_at	19866	-2.439	-0.0617	No
161	C1QBP	1448274_at 1455821_x_at	19937	-2.516	-0.0585	No
162	EEF1E1	1444757_at 1449044_at	20135	-2.731	-0.0606	No
163	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	20195	-2.793	-0.0563	No
164	SLC1A5	1416629_at 1440379_at	20200	-2.798	-0.0493	No
165	RAE1	1429528_at 1444256_at 1459822_at	20439	-3.076	-0.0525	No
166	PIP5K1A	1421833_at 1421834_at 1450389_s_at	20715	-3.466	-0.0563	No
167	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	20754	-3.528	-0.0491	No
168	CALU	1415870_at 1441477_at	20849	-3.683	-0.0440	No
169	SREBF1	1426690_a_at	20873	-3.719	-0.0357	No
170	EXTL3	1421339_at 1434703_at	20957	-3.842	-0.0297	No
171	INPP5E	1423229_at 1423230_at	21390	-4.898	-0.0371	No
172	IDI1	1423804_a_at 1451122_at	21392	-4.911	-0.0247	No
173	PSMC2	1426611_at 1435859_x_at 1443307_at	21845	-8.970	-0.0227	No
174	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	21882	-10.525	0.0024	No