Details for gene set MANALO_HYPOXIA

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	MANALO_HYPOXIA_DN
Enrichment Score (ES)	0.55954444
Normalized Enrichment Score (NES)	2.192394
Nominal p-value	0.0
FDR q-value	9.7011356E-4
FWER p-Value	0.0030

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DDX21	1448270_at 1448271_a_at	78	6.474	0.0363	Yes
2	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	90	6.305	0.0746	Yes
3	MCM4	1416214_at 1436708_x_at	94	6.274	0.1131	Yes
4	MCM6	1416251_at 1438852_x_at 1447756_x_at	95	6.259	0.1516	Yes
5	NOL5A	1426533_at 1455035_s_at	98	6.200	0.1897	Yes
6	RPP30	1423373_at	115	5.947	0.2255	Yes
7	TRIP13	1429294_at 1429295_s_at 1446760_at	163	5.509	0.2573	Yes
8	CTPS	1416563_at	178	5.392	0.2898	Yes
9	PRPS1	1416052_at	244	5.034	0.3179	Yes
10	SNRPD1	1416336_s_at	250	5.006	0.3484	Yes
11	USP1	1423674_at 1423675_at 1451080_at	376	4.444	0.3701	Yes
12	ORC6L	1417037_at	390	4.403	0.3966	Yes
13	RFC3	1423700_at 1432538_a_at	536	3.910	0.4140	Yes
14	MAD2L1	1422460_at	631	3.687	0.4324	Yes
15	POLG	1423272_at 1423273_at 1437564_at	806	3.361	0.4451	Yes
16	RNU3IP2	1451293_at	963	3.100	0.4571	Yes
17	USP39	1437007_x_at 1460209_at	1022	3.023	0.4730	Yes
18	TSFM	1432170_at 1452698_at	1172	2.850	0.4838	Yes
19	DNA2L	1438817_at 1452210_at 1457909_at	1542	2.483	0.4822	Yes
20	ATIC	1428506_at 1452811_at	1744	2.321	0.4873	Yes
21	MRPL40	1448849_at	1796	2.281	0.4990	Yes
22	PPARD	1425703_at 1439797_at	2360	1.967	0.4853	Yes
23	MPHOSPH9	1419909_at 1419910_at 1431053_at 1438063_at 1440915_at 1449659_s_at	2415	1.944	0.4948	Yes
24	MRPS12	1448799_s_at	2475	1.912	0.5039	Yes
25	SNRPD3	1422884_at 1422885_at 1449629_s_at	2588	1.864	0.5102	Yes
26	ID1	1425895_a_at	2728	1.814	0.5150	Yes
27	BOP1	1423264_at 1430491_at	2815	1.779	0.5221	Yes
28	UCHL5	1419452_at 1419453_at 1455086_at 1459011_at	2821	1.777	0.5328	Yes
29	NOLC1	1428869_at 1428870_at 1450087_a_at	2868	1.765	0.5415	Yes
30	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	2871	1.764	0.5523	Yes
31	POLE2	1427094_at 1431440_at	2947	1.735	0.5595	Yes
32	DHX35	1452693_at	3800	1.475	0.5296	No
33	MLLT10	1419772_at 1420869_at 1420870_at 1438525_at 1442070_at 1443500_at	3871	1.453	0.5354	No
34	PRC1	1423774_a_at 1423775_s_at	4234	1.365	0.5272	No
35	RFC5	1452917_at	5236	1.156	0.4885	No
36	MCM3	1420029_at 1426653_at	5651	1.081	0.4763	No
37	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	5677	1.077	0.4817	No
38	DDX18	1416070_a_at 1416071_at 1456000_at	6101	1.010	0.4686	No
39	POLD2	1448277_at	6571	0.942	0.4530	No
40	CCNE1	1416492_at 1441910_x_at	6862	0.899	0.4452	No
41	RRS1	1416998_at 1456865_x_at	7490	0.797	0.4214	No
42	CCNE2	1422535_at	7914	0.737	0.4066	No
43	DDX11	1438447_at 1441062_at	8688	0.620	0.3751	No
44	MCM10	1433407_at 1433408_a_at 1454244_at	8983	0.579	0.3652	No
45	RFC2	1417503_at 1457638_x_at 1457669_x_at	9129	0.555	0.3620	No
46	MFN2	1441424_at 1448131_at 1451900_at	9388	0.521	0.3534	No
47	MRPL46	1449004_at	10114	0.422	0.3228	No
48	MCM5	1415945_at 1436808_x_at	10208	0.409	0.3211	No
49	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	10595	0.352	0.3056	No
50	POLR3K	1422752_at 1422753_a_at 1439266_a_at 1440735_at 1450737_at 1456731_x_at	10907	0.313	0.2933	No
51	CDC7	1426002_a_at 1426021_a_at	11852	0.173	0.2511	No
52	CCNF	1422513_at 1443807_x_at	12362	0.097	0.2284	No
53	ILF3	1422546_at 1436802_at 1460669_at	13981	-0.175	0.1555	No
54	SKP2	1418969_at 1425072_at 1436000_a_at 1437033_a_at 1449293_a_at 1460247_a_at	14178	-0.209	0.1478	No
55	RRM2	1416120_at 1434437_x_at 1448226_at	14535	-0.276	0.1332	No
56	HNRPDL	1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at	14903	-0.349	0.1186	No
57	CDC6	1417019_a_at	15043	-0.376	0.1145	No
58	UBE2S	1416726_s_at 1430962_at	15210	-0.408	0.1095	No
59	MCM2	1434079_s_at 1448777_at	15310	-0.431	0.1076	No
60	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	15532	-0.490	0.1005	No
61	RPL39	1423032_at 1450840_a_at	16752	-0.823	0.0498	No
62	PSME3	1418078_at 1418079_at 1438509_at	17111	-0.940	0.0392	No
63	ZWINT	1423724_at 1427539_a_at 1427540_at 1429786_a_at 1429787_x_at 1444717_at 1455382_at	17227	-0.976	0.0399	No
64	HNRPD	1425142_a_at 1446083_at	17398	-1.029	0.0385	No
65	PSME4	1426823_s_at 1426824_at 1440511_at 1445147_at 1446464_at 1452211_at	18040	-1.293	0.0171	No
66	BRCA1	1424629_at 1424630_a_at 1427698_at 1443763_at 1451417_at	18057	-1.299	0.0244	No
67	UMPS	1431652_at 1434859_at 1451445_at 1455832_a_at	18092	-1.312	0.0309	No
68	NEK4	1427639_a_at 1449861_at	18383	-1.453	0.0266	No
69	DHFR	1419172_at 1430750_at	18652	-1.573	0.0240	No
70	HNRPU	1423050_s_at 1423051_at 1434390_at 1434391_at 1450849_at	18703	-1.600	0.0316	No
71	GTPBP4	1423142_a_at 1423143_at 1450873_at	18791	-1.665	0.0378	No
72	BARD1	1420594_at	19126	-1.885	0.0341	No
73	TFAM	1448224_at 1456215_at	19446	-2.096	0.0324	No
74	RRM1	1415878_at 1440073_at 1448127_at	19774	-2.353	0.0320	No
75	DDX23	1430050_at	19777	-2.356	0.0464	No
76	ELK1	1421896_at 1421897_at 1446390_at	19848	-2.424	0.0581	No
77	MAZ	1427099_at	20396	-3.020	0.0517	No
78	SNAPC5	1427999_at	20406	-3.033	0.0699	No