Details for gene set GOLDRATH

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	GOLDRATH_HP
Enrichment Score (ES)	0.4488329
Normalized Enrichment Score (NES)	1.9942406
Nominal p-value	0.0
FDR q-value	0.0059502055
FWER p-Value	0.076

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	KLF9	1422264_s_at 1428288_at 1428289_at 1436763_a_at 1436952_at 1452723_at 1456341_a_at	17	8.877	0.0269	Yes
2	D13WSU177E	1424620_at 1451414_at	27	8.292	0.0524	Yes
3	SET	1426853_at 1426854_a_at	30	8.162	0.0778	Yes
4	TAF9	1422778_at 1451509_at	66	6.778	0.0973	Yes
5	YIPF5	1418576_at 1444289_at 1449142_a_at	76	6.562	0.1174	Yes
6	SLC7A5	1418326_at	80	6.452	0.1374	Yes
7	PPA1	1416939_at	84	6.427	0.1573	Yes
8	EIF3S1	1426394_at 1426395_s_at 1452052_s_at	109	6.040	0.1751	Yes
9	MKI67IP	1424001_at	122	5.908	0.1930	Yes
10	PDAP1	1434019_at 1434020_at	144	5.671	0.2097	Yes
11	NOLA2	1416605_at 1416606_s_at	167	5.483	0.2258	Yes
12	SMN1	1426596_a_at	203	5.247	0.2406	Yes
13	CACYBP	1452047_at	212	5.211	0.2565	Yes
14	BAG2	1423948_at	259	4.970	0.2699	Yes
15	PDCD2	1423534_at	369	4.467	0.2788	Yes
16	ATP5J	1416143_at	484	4.064	0.2862	Yes
17	PSMC6	1417771_a_at	510	3.987	0.2975	Yes
18	PCCB	1450969_at	551	3.866	0.3078	Yes
19	PTGES3	1417998_at 1460221_at	580	3.794	0.3183	Yes
20	ZHX1	1448875_at 1458382_a_at	702	3.557	0.3239	Yes
21	VDAC2	1415990_at	764	3.443	0.3318	Yes
22	UNG	1425753_a_at	811	3.351	0.3402	Yes
23	CHEK2	1422747_at	873	3.243	0.3475	Yes
24	CCT2	1416037_a_at 1433534_a_at 1433535_x_at	887	3.219	0.3569	Yes
25	PDCD6	1416027_at	888	3.218	0.3670	Yes
26	HDGF	1415888_at 1419964_s_at 1449681_at	953	3.111	0.3737	Yes
27	SRPR	1423670_a_at 1427570_at	1067	2.979	0.3778	Yes
28	CETN3	1417239_at	1101	2.945	0.3855	Yes
29	SFXN1	1417559_at 1417560_at	1102	2.945	0.3947	Yes
30	HSPE1	1450668_s_at	1159	2.872	0.4011	Yes
31	ITGB1BP1	1422157_a_at 1445697_at	1163	2.865	0.4099	Yes
32	CANX	1415692_s_at 1422845_at 1428935_at	1180	2.840	0.4180	Yes
33	TIAL1	1421148_a_at 1426352_s_at 1446713_at 1452821_at 1455675_a_at 1455676_x_at	1204	2.812	0.4258	Yes
34	GALK1	1417177_at	1368	2.661	0.4266	Yes
35	MRPS33	1427173_a_at	1447	2.570	0.4310	Yes
36	MAGOH	1416212_at	1622	2.410	0.4305	Yes
37	QDPR	1423664_at 1437993_x_at	1627	2.405	0.4379	Yes
38	SEL1H	1425187_at 1425188_s_at 1430692_a_at 1436774_at 1453559_a_at	1757	2.314	0.4392	Yes
39	JOSD3	1430147_a_at 1430271_x_at 1436558_at 1442289_at 1452635_x_at 1452987_at 1457292_at	1911	2.216	0.4390	Yes
40	NUDCD2	1418566_s_at 1449140_at	2001	2.155	0.4417	Yes
41	PSMC5	1415740_at	2226	2.037	0.4377	Yes
42	GOLPH4	1428875_at 1445190_at 1459045_at	2298	2.003	0.4407	Yes
43	NUDT19	1432332_a_at 1434216_a_at	2333	1.980	0.4453	Yes
44	AKAP8	1433669_at 1450983_at	2501	1.901	0.4436	Yes
45	RAB18	1420899_at 1420900_a_at	2517	1.897	0.4488	Yes
46	VTI1B	1449003_a_at	2942	1.736	0.4348	No
47	GNPNAT1	1423156_at 1423157_at 1423158_at 1457807_at 1458196_at	3160	1.661	0.4300	No
48	ITFG1	1419041_at 1441736_at	3557	1.543	0.4166	No
49	CSPG3	1423604_at 1434679_at 1444020_at	3559	1.541	0.4214	No
50	1110008F13RIK	1416699_at 1459810_at	3570	1.537	0.4257	No
51	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	3805	1.474	0.4195	No
52	2310016A09RIK	1451322_at	3919	1.442	0.4188	No
53	BTBD14A	1417152_at 1417153_at 1429582_at 1447608_x_at	4008	1.418	0.4192	No
54	CPSF2	1420936_s_at 1420937_at 1431089_at 1443083_at	4089	1.396	0.4199	No
55	2310056P07RIK	1443339_at 1451385_at	4141	1.384	0.4219	No
56	2310010J17RIK	1439962_at	4332	1.344	0.4173	No
57	PCGF2	1420645_at 1456330_at	4579	1.282	0.4100	No
58	ADAM3A	1448329_at	4696	1.256	0.4086	No
59	UBQLN2	1420844_at 1450021_at 1456627_at	4715	1.254	0.4117	No
60	AU021838	1433903_at 1454814_s_at	4726	1.252	0.4152	No
61	SCD5	1415822_at 1415823_at 1415824_at	5108	1.181	0.4013	No
62	NDUFC1	1416285_at 1448284_a_at	5241	1.155	0.3989	No
63	ZRSR2	1421128_at 1442154_at 1444611_at 1455727_at	5475	1.112	0.3916	No
64	2700007P21RIK	1430586_at 1436859_at 1459902_at	5624	1.085	0.3882	No
65	PARK7	1416526_a_at 1456194_a_at	5697	1.074	0.3883	No
66	4933428G09RIK	1426253_at 1443403_at	5838	1.049	0.3851	No
67	MUT	1416838_at 1416839_at 1448486_at	5931	1.037	0.3841	No
68	MRPS25	1418716_at 1418717_at 1449194_at	5954	1.033	0.3863	No
69	RNF11	1426404_a_at 1426405_at 1439685_at 1442048_at 1452058_a_at	6186	0.999	0.3788	No
70	2610005L07RIK	1429040_at 1429041_at 1429882_at 1440184_at 1440387_at 1452997_at 1453589_a_at 1457673_at 1458527_at	6429	0.963	0.3707	No
71	RNF141	1418466_at 1427120_at 1433655_at 1449086_at 1449087_at	6436	0.962	0.3734	No
72	CD55	1418762_at 1443906_at 1460242_at	6493	0.953	0.3738	No
73	EOMES	1426001_at 1435172_at	6619	0.934	0.3710	No
74	D1ERTD622E	1417471_s_at 1448721_at	6890	0.894	0.3614	No
75	LIN7C	1418898_at 1423322_at 1449262_s_at 1450937_at	7279	0.829	0.3461	No
76	NME1	1424110_a_at 1435277_x_at	7443	0.804	0.3412	No
77	BYSL	1422767_at 1450742_at	7503	0.795	0.3409	No
78	C330012H03RIK	1437103_at 1439764_s_at	7624	0.778	0.3378	No
79	MYO6	1421120_at 1433942_at 1435559_at	7711	0.766	0.3363	No
80	PNPLA1	1457448_at	7796	0.754	0.3348	No
81	BRP44	1423833_a_at 1430071_at	7953	0.733	0.3299	No
82	TPD52	1419493_a_at 1419494_a_at 1436008_at 1458668_at	8139	0.703	0.3236	No
83	DHX9	1425617_at 1425618_at 1451770_s_at	8338	0.673	0.3166	No
84	EBF3	1428349_s_at 1452751_at 1456513_at 1460666_a_at	8417	0.661	0.3151	No
85	TM9SF3	1416509_at 1428412_at 1442821_at 1448375_at 1458681_at 1460186_at	8686	0.620	0.3047	No
86	IRAK1	1448668_a_at 1460649_at	8837	0.599	0.2997	No
87	H2AFY	1424572_a_at	8882	0.593	0.2995	No
88	IPP	1421771_a_at	8959	0.582	0.2978	No
89	PTDSS1	1416372_at 1441866_s_at 1449739_at	9084	0.565	0.2939	No
90	PLEKHA1	1417965_at 1443111_at	9405	0.519	0.2808	No
91	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	9658	0.482	0.2707	No
92	STRN	1422036_at 1455022_at 1455156_at	9667	0.481	0.2718	No
93	1110059E24RIK	1416841_at	9738	0.471	0.2701	No
94	IGBP1	1419999_at 1420000_s_at 1442161_at 1449700_at 1460737_at	9894	0.449	0.2644	No
95	2310028O11RIK	1433616_a_at 1436001_at 1455126_x_at	10026	0.431	0.2597	No
96	NDUFB2	1416834_x_at 1442658_at 1448483_a_at 1453806_at	10135	0.419	0.2560	No
97	YME1L1	1423360_at 1423361_at 1437822_at 1450954_at	10146	0.418	0.2569	No
98	VAMP4	1422895_at 1422896_at 1434796_at	10223	0.407	0.2547	No
99	4833442J19RIK	1427202_at 1457915_at	10490	0.369	0.2436	No
100	GTPBP1	1450022_at 1450023_at	10776	0.329	0.2315	No
101	CDCA7L	1451306_at	10814	0.325	0.2308	No
102	MRPL9	1427297_at 1430976_a_at 1437749_s_at	10920	0.311	0.2270	No
103	STT3A	1423033_at 1441417_at 1450841_at 1455824_x_at	10956	0.305	0.2263	No
104	SNX9	1423076_at 1423077_at	11023	0.298	0.2242	No
105	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	11503	0.226	0.2029	No
106	PRKCA	1427562_a_at 1443069_at 1445028_at 1445395_at 1446598_at 1450945_at	11573	0.217	0.2004	No
107	NDUFB3	1416547_at	11882	0.169	0.1868	No
108	IPO7	1442511_at 1454955_at 1458165_at	12118	0.133	0.1764	No
109	ATP5D	1423716_s_at 1456580_s_at	12123	0.132	0.1766	No
110	KCNS2	1421342_at 1441211_at 1457325_at	12165	0.126	0.1751	No
111	NTAN1	1423538_at 1447917_x_at	12336	0.100	0.1676	No
112	GMFB	1417069_a_at 1431686_a_at 1431687_at 1448570_at 1448571_a_at	12509	0.075	0.1600	No
113	APP	1420621_a_at 1427442_a_at 1438373_at 1438374_x_at 1444705_at 1447347_at 1458525_at	12772	0.037	0.1480	No
114	SDHC	1435986_x_at 1448630_a_at	12889	0.019	0.1428	No
115	NDUFAB1	1428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at	13197	-0.035	0.1288	No
116	FUBP1	1433482_a_at 1433640_at 1437543_at 1437544_at	13293	-0.053	0.1246	No
117	CRI1	1416614_at 1448405_a_at 1448406_at	13422	-0.075	0.1189	No
118	AQP9	1421605_a_at 1424011_at	13534	-0.092	0.1141	No
119	KCTD12	1434881_s_at	13583	-0.100	0.1122	No
120	5730408K05RIK	1429207_at 1429208_at	13900	-0.160	0.0982	No
121	X83328	1417241_at	14096	-0.194	0.0898	No
122	WASPIP	1436953_at 1436954_at 1447274_at 1447348_at	14322	-0.239	0.0802	No
123	ATP6V0B	1416769_s_at 1425448_x_at 1437013_x_at	14457	-0.263	0.0749	No
124	SEMA4F	1419328_at 1439768_x_at	14459	-0.263	0.0757	No
125	ENPEP	1448649_at	14671	-0.302	0.0669	No
126	RAD23B	1424222_s_at 1450903_at 1455420_at 1456822_at	14717	-0.312	0.0658	No
127	IFT88	1448652_at	14894	-0.347	0.0588	No
128	GPX1	1460671_at	15117	-0.390	0.0498	No
129	HSD3B5	1420531_at	15370	-0.448	0.0396	No
130	E2F1	1417878_at 1431875_a_at 1447840_x_at	15380	-0.452	0.0406	No
131	BCL2	1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at	15444	-0.468	0.0392	No
132	IMPA2	1418665_at 1459983_at	15516	-0.485	0.0375	No
133	SNRPE	1451294_s_at	15606	-0.510	0.0350	No
134	ROCK1	1423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at	16058	-0.618	0.0162	No
135	TLOC1	1432635_a_at 1433704_s_at 1439233_at 1444811_at 1454697_at 1455698_at	16103	-0.631	0.0161	No
136	AI788669	1434312_at	16132	-0.638	0.0168	No
137	ALDH3A2	1415776_at	16172	-0.648	0.0170	No
138	2700094K13RIK	1436349_at	16314	-0.692	0.0127	No
139	RECK	1450784_at	16346	-0.700	0.0135	No
140	USP15	1436891_at 1446186_at 1454036_a_at 1455842_x_at	16771	-0.831	-0.0034	No
141	E330034G19RIK	1433798_a_at	16780	-0.835	-0.0012	No
142	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	16793	-0.840	0.0009	No
143	AU016916	1420083_at	16925	-0.878	-0.0024	No
144	HRB	1426922_s_at 1426923_at 1434840_at 1452237_at 1452238_at	17115	-0.940	-0.0081	No
145	SOS2	1452281_at	17198	-0.965	-0.0089	No
146	RPIA	1418337_at	17374	-1.022	-0.0138	No
147	C1QB	1417063_at 1434366_x_at 1437726_x_at 1457322_at	17449	-1.044	-0.0139	No
148	ZFP62	1425495_at 1451730_at	17477	-1.053	-0.0118	No
149	TGOLN1	1418520_at 1423308_at 1423309_at	17671	-1.136	-0.0172	No
150	SOCS3	1416576_at 1455899_x_at 1456212_x_at	17683	-1.146	-0.0141	No
151	TAX1BP1	1420174_s_at 1420175_at 1442901_at 1448399_at	17858	-1.217	-0.0183	No
152	F2RL1	1448931_at	18053	-1.297	-0.0232	No
153	MSL2L1	1429108_at 1429109_at 1453030_at	18169	-1.351	-0.0242	No
154	TIMM22	1448517_at 1448518_at	18375	-1.449	-0.0291	No
155	GYK	1422703_at 1422704_at 1445242_at	18559	-1.538	-0.0327	No
156	PCBD2	1452621_at	18601	-1.553	-0.0298	No
157	SFPQ	1423795_at 1423796_at 1436898_at 1438458_a_at 1438459_x_at 1439058_at	18687	-1.589	-0.0287	No
158	PELO	1434071_a_at	18952	-1.756	-0.0354	No
159	ATP11A	1421167_at 1456388_at	19190	-1.928	-0.0403	No
160	IL10RB	1419455_at	19332	-2.035	-0.0404	No
161	DUSP19	1418038_s_at 1440572_at 1448922_at	19363	-2.048	-0.0354	No
162	SORL1	1426258_at 1445889_at 1453003_at 1460390_at	19420	-2.086	-0.0314	No
163	1110049G11RIK	1449213_at	19480	-2.114	-0.0275	No
164	RAB5C	1424684_at	19524	-2.148	-0.0228	No
165	4930453N24RIK	1423976_at 1427664_at 1438553_x_at 1449718_s_at 1449719_at	19877	-2.454	-0.0313	No
166	GLUL	1426235_a_at 1426236_a_at	19879	-2.455	-0.0237	No
167	DYNLL2	1418258_s_at 1418371_at	19910	-2.493	-0.0173	No
168	PAFAH1B1	1417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at	20122	-2.721	-0.0185	No
169	NFKBIZ	1417483_at 1448728_a_at 1457404_at	20419	-3.052	-0.0226	No
170	TRNT1	1425561_at 1425562_s_at	20624	-3.338	-0.0216	No
171	CYB5R1	1424048_a_at	20652	-3.384	-0.0122	No
172	5830411E10RIK	1426806_at 1430623_s_at 1444399_at 1452203_at 1455679_at 1460521_a_at	20722	-3.480	-0.0045	No
173	UBL5	1416848_at	20772	-3.557	0.0043	No
174	CMAS	1426662_at	20824	-3.648	0.0134	No
175	AW146242	1423812_s_at 1451127_at 1458828_at	20839	-3.666	0.0242	No
176	ZFP131	1428616_at	20894	-3.742	0.0334	No
177	BZW2	1423456_at 1443227_at	21281	-4.613	0.0300	No