Details for gene set CANCER_NEOPLASTIC_META

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	CANCER_NEOPLASTIC_META_UP
Enrichment Score (ES)	0.5471707
Normalized Enrichment Score (NES)	2.0005634
Nominal p-value	0.0
FDR q-value	0.0060383254
FWER p-Value	0.066

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HSPD1	1426351_at	48	7.217	0.0550	Yes
2	KDELR2	1417204_at 1417205_at	51	7.145	0.1115	Yes
3	NONO	1415820_x_at 1431239_at 1448103_s_at	200	5.259	0.1464	Yes
4	CCT5	1417258_at	238	5.073	0.1849	Yes
5	NCBP2	1423045_at 1423046_s_at 1450847_at	453	4.163	0.2081	Yes
6	TARS	1460323_at	469	4.124	0.2401	Yes
7	LDHA	1419737_a_at	486	4.060	0.2715	Yes
8	AHCY	1417125_at	502	4.013	0.3026	Yes
9	PAICS	1423564_a_at 1423565_at 1436298_x_at	921	3.157	0.3085	Yes
10	RFC4	1424321_at 1438161_s_at	1141	2.887	0.3214	Yes
11	HSPE1	1450668_s_at	1159	2.872	0.3434	Yes
12	CANX	1415692_s_at 1422845_at 1428935_at	1180	2.840	0.3650	Yes
13	TPX2	1428104_at 1428105_at 1447518_at 1447519_x_at	1200	2.817	0.3864	Yes
14	MTHFD2	1419253_at 1419254_at	1234	2.780	0.4069	Yes
15	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	1296	2.728	0.4258	Yes
16	NUP205	1430343_at 1454743_at	1358	2.674	0.4442	Yes
17	TSTA3	1448495_at	1488	2.533	0.4583	Yes
18	CKS2	1417457_at 1417458_s_at	1531	2.494	0.4762	Yes
19	PSME2	1417189_at	1631	2.404	0.4907	Yes
20	SNRPF	1428672_at	1862	2.240	0.4979	Yes
21	SSR1	1441327_a_at 1444526_at	2087	2.109	0.5044	Yes
22	MRPS12	1448799_s_at	2475	1.912	0.5018	Yes
23	PTMA	1423455_at	2509	1.898	0.5154	Yes
24	TGIF	1422286_a_at	2596	1.863	0.5262	Yes
25	CDKN3	1415968_a_at 1415969_s_at 1430574_at	2931	1.742	0.5247	Yes
26	ILF2	1417948_s_at 1417949_at	3085	1.688	0.5311	Yes
27	MRPL3	1422463_a_at 1422464_at 1431006_at 1440636_at	3135	1.669	0.5421	Yes
28	SSBP1	1427965_at 1430294_at 1444053_at 1452616_s_at 1452617_at	3328	1.614	0.5461	Yes
29	TRAF4	1416571_at 1460642_at	3572	1.536	0.5472	Yes
30	DDX48	1417242_at 1436700_a_at	4082	1.398	0.5350	No
31	TOP2A	1427724_at 1442454_at 1454694_a_at	4229	1.366	0.5391	No
32	COPB2	1452102_at 1456175_a_at	4707	1.255	0.5273	No
33	MCM3	1420029_at 1426653_at	5651	1.081	0.4927	No
34	ARMET	1428112_at 1459455_at	5831	1.050	0.4929	No
35	NME1	1424110_a_at 1435277_x_at	7443	0.804	0.4256	No
36	PRDX4	1416166_a_at 1416167_at 1431269_at	7453	0.803	0.4315	No
37	ACLY	1425326_at 1438389_x_at 1439445_x_at 1439459_x_at 1446315_at 1451666_at	8012	0.723	0.4118	No
38	DVL3	1420457_at	8252	0.685	0.4063	No
39	FAP	1417552_at	10199	0.411	0.3206	No
40	IARS	1426705_s_at 1452154_at	11069	0.292	0.2831	No
41	COL1A2	1446326_at 1450857_a_at	11242	0.264	0.2774	No
42	PAFAH1B3	1416410_at	11319	0.251	0.2759	No
43	HDAC1	1448246_at	11842	0.175	0.2534	No
44	SDHC	1435986_x_at 1448630_a_at	12889	0.019	0.2057	No
45	PSMC4	1416290_a_at 1416291_at	13729	-0.131	0.1684	No
46	CBX3	1432628_at 1454305_at	14878	-0.343	0.1187	No
47	UBE2S	1416726_s_at 1430962_at	15210	-0.408	0.1068	No
48	SNRPE	1451294_s_at	15606	-0.510	0.0927	No
49	TUBB	1416256_a_at 1455719_at	16712	-0.813	0.0487	No
50	CCT4	1415867_at 1415868_at 1430034_at 1433447_x_at 1438560_x_at 1442569_at 1456082_x_at 1456572_x_at	16837	-0.852	0.0497	No
51	PLK1	1443408_at 1448191_at 1459616_at	17066	-0.924	0.0466	No
52	CRIP2	1417311_at	17644	-1.121	0.0292	No
53	SOX4	1455867_at 1458332_x_at	18189	-1.359	0.0151	No
54	PPP2R5C	1425542_a_at 1425725_s_at 1425726_x_at 1427003_at 1434205_at 1434206_s_at 1444828_at	18280	-1.405	0.0221	No
55	RBM4	1416920_at 1437322_at 1455517_at	19217	-1.957	-0.0052	No
56	OGT	1425516_at 1425517_s_at 1436780_at 1451738_at 1457073_at 1460631_at	19763	-2.342	-0.0116	No
57	E2F5	1417444_at 1447625_at 1460207_s_at	20228	-2.832	-0.0103	No
58	IFNGR2	1423557_at 1423558_at	20403	-3.030	0.0057	No
59	MMP9	1416298_at 1448291_at	20464	-3.107	0.0276	No
60	SMARCA4	1426804_at 1426805_at	21407	-4.994	0.0241	No