Details for gene set BROCKE

Table: GSEA Results Summary

Dataset	Set_02_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	BROCKE_IL6
Enrichment Score (ES)	-0.51653504
Normalized Enrichment Score (NES)	-1.9627986
Nominal p-value	0.0
FDR q-value	0.011863836
FWER p-Value	0.133

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	DPM1	1419353_at 1449438_at	9	9.113	0.0309	No
2	CEBPB	1418901_at 1427844_a_at	86	6.374	0.0492	No
3	DYRK3	1424229_at	443	4.191	0.0473	No
4	NCBP2	1423045_at 1423046_s_at 1450847_at	453	4.163	0.0612	No
5	MX1	1451905_a_at	607	3.741	0.0670	No
6	TXNDC9	1424512_a_at 1436108_at 1436951_x_at	765	3.442	0.0716	No
7	NMI	1425719_a_at	945	3.120	0.0741	No
8	CCL2	1420380_at	1140	2.887	0.0751	No
9	PTK9	1420873_at 1420874_at 1420875_at	1202	2.815	0.0820	No
10	POU2AF1	1416957_at	1379	2.650	0.0830	No
11	TMED7	1419917_s_at 1419918_at 1427314_at 1427315_at 1429187_at	1997	2.160	0.0621	No
12	RAPGEF4	1421622_a_at 1425518_at 1440274_at 1444034_at	2176	2.059	0.0610	No
13	ZFP36L2	1437626_at 1439054_at 1451034_at	2405	1.950	0.0572	No
14	PTP4A1	1419024_at 1455002_at	2533	1.890	0.0579	No
15	TGIF	1422286_a_at	2596	1.863	0.0615	No
16	ID1	1425895_a_at	2728	1.814	0.0617	No
17	PTPRG	1447906_at 1450122_at	2899	1.750	0.0599	No
18	WIPI1	1424917_a_at 1427323_s_at 1438709_at 1439060_s_at 1452392_a_at 1456624_at	3248	1.639	0.0495	No
19	DNAJA2	1417182_at 1417183_at 1429476_s_at 1457233_at	3735	1.493	0.0324	No
20	CADPS	1444488_at 1445586_at 1448955_s_at 1458298_at	4139	1.384	0.0187	No
21	LOH11CR2A	1426221_at 1426222_s_at	4143	1.383	0.0233	No
22	MAPKAPK2	1426648_at	4175	1.378	0.0266	No
23	ATP2B4	1445701_at	4290	1.354	0.0260	No
24	PDGFRA	1421916_at 1421917_at 1438946_at	4376	1.334	0.0267	No
25	HCK	1446553_at 1449455_at	4377	1.334	0.0312	No
26	CD8B	1426170_a_at 1446372_at 1448569_at 1458652_at	4420	1.320	0.0338	No
27	SLC16A6	1417884_at	4424	1.319	0.0382	No
28	SPP1	1449254_at	4600	1.277	0.0346	No
29	MUC1	1449199_at	5143	1.175	0.0138	No
30	ACPP	1416297_s_at 1419832_s_at 1441975_at 1448290_at 1453943_a_at	5449	1.117	0.0036	No
31	PTP4A3	1418181_at 1418182_at	6178	1.000	-0.0263	No
32	POU2F2	1427713_x_at 1427725_a_at	6272	0.987	-0.0272	No
33	MEF2B	1421541_a_at	6321	0.978	-0.0261	No
34	CD44	1423760_at 1434376_at 1443265_at 1452483_a_at	6384	0.968	-0.0256	No
35	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	6648	0.928	-0.0345	No
36	LRMP	1448409_at	7147	0.851	-0.0544	No
37	GRB2	1418508_a_at 1449111_a_at	7424	0.806	-0.0643	No
38	EIF5	1415723_at 1433631_at 1454663_at 1454664_a_at 1456256_at	8330	0.673	-0.1035	No
39	LITAF	1416303_at 1416304_at	8372	0.667	-0.1030	No
40	AGPAT7	1440207_at	8721	0.616	-0.1169	No
41	GATM	1423569_at	8748	0.612	-0.1160	No
42	CD180	1421547_at	9097	0.561	-0.1300	No
43	GAS6	1417399_at 1459585_at	9471	0.508	-0.1454	No
44	SNF1LK	1419766_at 1459601_at	9692	0.478	-0.1538	No
45	POLR3F	1429686_at 1430328_at 1431999_at 1439075_at 1451773_s_at	9708	0.475	-0.1529	No
46	PIM1	1423006_at 1435458_at	9985	0.437	-0.1640	No
47	TNFSF10	1420412_at 1439680_at 1459913_at	10242	0.404	-0.1744	No
48	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	10504	0.367	-0.1851	No
49	SC4MOL	1423078_a_at 1459627_at	10813	0.325	-0.1981	No
50	IFNGR1	1443602_at 1448167_at	11070	0.292	-0.2088	No
51	BHLHB2	1418025_at	11517	0.223	-0.2285	No
52	CCNC	1417861_at 1428570_at 1454144_a_at 1454336_at	12320	0.102	-0.2649	No
53	PRDM1	1420425_at 1444997_at	12655	0.055	-0.2801	No
54	IRF4	1421173_at 1421174_at	12762	0.038	-0.2848	No
55	HBEGF	1418349_at 1418350_at	12857	0.024	-0.2890	No
56	SOX2	1416967_at	13146	-0.028	-0.3021	No
57	DUSP3	1425608_at 1434472_at 1456769_at	13180	-0.034	-0.3035	No
58	ST3GAL6	1443740_at 1447841_x_at 1449078_at 1449079_s_at 1454246_at 1459354_at	13625	-0.108	-0.3235	No
59	STCH	1429502_at 1430026_at 1433772_at 1453172_at	13962	-0.172	-0.3383	No
60	LDLR	1421821_at 1431947_at 1450383_at 1459403_at	13975	-0.174	-0.3383	No
61	ZBTB11	1454826_at	14030	-0.184	-0.3401	No
62	EVI2A	1443894_at 1450241_a_at 1458788_at 1460055_at	14206	-0.215	-0.3474	No
63	RALA	1423137_at 1450870_at 1456049_at	14310	-0.235	-0.3513	No
64	RNF13	1420620_a_at 1443178_at 1443407_at 1451074_at	14354	-0.244	-0.3525	No
65	HSPA1A	1452388_at	14827	-0.335	-0.3730	No
66	PLSCR1	1453181_x_at	14994	-0.369	-0.3793	No
67	GNA13	1422555_s_at 1422556_at 1430295_at 1433749_at 1446722_at 1450656_at 1453470_a_at 1460317_s_at	15145	-0.394	-0.3848	No
68	DOHH	1417322_at 1436402_at	15226	-0.411	-0.3871	No
69	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	15532	-0.490	-0.3994	No
70	PHTF2	1437067_at 1437637_at 1444559_at	15711	-0.537	-0.4057	No
71	PCTK2	1435143_at 1446130_at 1446272_at	15735	-0.544	-0.4049	No
72	DAPK1	1426915_at 1427358_a_at 1445032_at	16042	-0.611	-0.4168	No
73	RAD1	1448414_at	16253	-0.673	-0.4242	No
74	ELL2	1450744_at 1458569_at	16283	-0.684	-0.4231	No
75	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	16705	-0.811	-0.4397	No
76	JUN	1417409_at 1448694_at	16926	-0.879	-0.4467	No
77	MARCKS	1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at	16946	-0.884	-0.4446	No
78	RCN2	1422449_s_at 1444248_at	17186	-0.961	-0.4522	No
79	RGS16	1426037_a_at 1451452_a_at 1455265_a_at	17404	-1.031	-0.4586	No
80	RHOBTB3	1429661_at 1433647_s_at 1447869_x_at 1453227_at 1457009_at	17415	-1.034	-0.4556	No
81	MAP3K8	1419208_at	17444	-1.043	-0.4533	No
82	ANAPC10	1429375_at 1429376_s_at 1444033_at 1458390_at	17539	-1.081	-0.4539	No
83	SOCS3	1416576_at 1455899_x_at 1456212_x_at	17683	-1.146	-0.4565	No
84	SRPK2	1417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at	18037	-1.291	-0.4682	No
85	MYLK	1425504_at 1425505_at 1425506_at	18283	-1.406	-0.4747	No
86	CAV2	1417327_at 1425955_at	18443	-1.485	-0.4768	No
87	HNRPU	1423050_s_at 1423051_at 1434390_at 1434391_at 1450849_at	18703	-1.600	-0.4832	No
88	ARFGAP3	1426534_a_at 1430904_at	18714	-1.605	-0.4782	No
89	PTPN11	1421196_at 1427699_a_at 1451225_at	19021	-1.809	-0.4860	No
90	FOXO3A	1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at	19419	-2.085	-0.4971	No
91	SGK	1416041_at	19615	-2.209	-0.4984	No
92	STK17B	1423452_at 1430165_at 1450997_at	20011	-2.589	-0.5077	Yes
93	MAFF	1418936_at	20073	-2.661	-0.5013	Yes
94	DNAJB9	1417191_at	20131	-2.729	-0.4946	Yes
95	EEF1E1	1444757_at 1449044_at	20135	-2.731	-0.4853	Yes
96	SLA	1420818_at 1420819_at 1441761_at 1447813_x_at	20152	-2.752	-0.4766	Yes
97	SH2D2A	1449105_at	20248	-2.853	-0.4712	Yes
98	MAZ	1427099_at	20396	-3.020	-0.4676	Yes
99	IRF1	1448436_a_at	20504	-3.165	-0.4616	Yes
100	ADIPOR2	1434329_s_at 1437864_at	20505	-3.166	-0.4508	Yes
101	BCL3	1418133_at	20646	-3.380	-0.4456	Yes
102	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	20662	-3.392	-0.4346	Yes
103	CXCR4	1448710_at	20678	-3.415	-0.4236	Yes
104	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	20682	-3.421	-0.4120	Yes
105	ICAM1	1424067_at	20776	-3.566	-0.4040	Yes
106	STAT1	1420915_at 1440481_at 1450033_a_at 1450034_at	20879	-3.726	-0.3959	Yes
107	BCL2L11	1426334_a_at 1435448_at 1435449_at 1456005_a_at 1456006_at 1459794_at	20953	-3.830	-0.3861	Yes
108	GADD45A	1449519_at	20994	-3.913	-0.3745	Yes
109	FLOT1	1448559_at	21101	-4.137	-0.3652	Yes
110	AMPD1	1434722_at	21195	-4.394	-0.3544	Yes
111	EVI2B	1426505_at	21218	-4.443	-0.3402	Yes
112	GADD45B	1420197_at 1449773_s_at 1450971_at	21323	-4.709	-0.3288	Yes
113	SOCS1	1440047_at 1450446_a_at	21486	-5.335	-0.3179	Yes
114	PLEKHB2	1447810_x_at 1460341_at	21496	-5.372	-0.2999	Yes
115	USP52	1426700_a_at	21560	-5.702	-0.2832	Yes
116	PIM2	1417216_at	21584	-5.841	-0.2642	Yes
117	JUNB	1415899_at	21600	-5.913	-0.2446	Yes
118	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	21633	-6.090	-0.2252	Yes
119	SBNO2	1439349_at 1441840_x_at 1443721_x_at 1458308_at	21655	-6.220	-0.2048	Yes
120	IER2	1416442_at	21657	-6.231	-0.1835	Yes
121	DUSP5	1437199_at	21667	-6.307	-0.1623	Yes
122	ID3	1416630_at	21834	-8.786	-0.1397	Yes
123	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	21868	-9.776	-0.1077	Yes
124	ISGF3G	1421322_a_at	21871	-9.841	-0.0740	Yes
125	ZFP36	1452519_a_at	21884	-10.672	-0.0380	Yes
126	BCL6	1421818_at 1450381_a_at	21907	-11.718	0.0012	Yes