DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetPHOSPHORYLATION
Enrichment Score (ES)-0.40962732
Normalized Enrichment Score (NES)-1.6979053
Nominal p-value0.0
FDR q-value0.21233769
FWER p-Value0.987
Table: GSEA Results Summary



Fig 1: Enrichment plot: PHOSPHORYLATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PRKAA21429463_at 1429464_at1165.8250.0092No
2FGR1419526_at 1442804_at1265.6650.0229No
3RPS6KA41438243_at 1448498_at1495.3030.0352No
4CDKN1A1421679_a_at 1424638_at1615.1890.0477No
5COL4A3BP1420383_a_at 1420384_at 1449847_a_at 1452867_at3723.8210.0475No
6CDK2AP11426885_a_at 1435509_x_at 1456314_x_at6373.0960.0431No
7GSG21450886_at6493.0580.0502No
8CCND11417419_at 1417420_at 1448698_at7412.8500.0531No
9DYRK31424229_at7792.7950.0584No
10RIPK41418487_at 1418488_s_at7922.7800.0648No
11UQCRC11428782_a_at9882.4640.0619No
12DAPK21451453_at10062.4380.0672No
13IKBKAP1424142_at 1451254_at10132.4260.0730No
14MCM71416030_a_at 1416031_s_at 1438320_s_at11132.3070.0742No
15WNK21453355_at 1455424_at11232.2970.0796No
16AKT11416657_at 1425711_a_at 1440950_at 1442759_at14422.0300.0699No
17TTN1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at15351.9850.0707No
18MAST21417324_at 1440321_at 1441847_at 1444813_at 1456927_at 1459558_at17241.8900.0667No
19IL51425546_a_at 1442049_at 1450550_at18131.8390.0672No
20CSK1423518_at 1439744_at19841.7360.0637No
21EPHA81419341_at22581.5880.0551No
22SNF1LK21444472_at 1457276_at23521.5420.0546No
23PRDX41416166_a_at 1416167_at 1431269_at23591.5410.0582No
24RAGE1441128_at 1449476_at24801.4850.0564No
25LTK1460300_a_at24961.4770.0594No
26RET1421359_at26301.4260.0568No
27BCR1427265_at 1452368_at 1455564_at26861.4060.0578No
28MAP3K61449901_a_at28351.3570.0543No
29STK31418512_at 1418513_at 1446289_at 1446627_at 1449114_at30791.2890.0463No
30MAP2K61426850_a_at 1459292_at31971.2540.0441No
31VRK11425006_a_at 1458951_at32731.2380.0437No
32MATK1421739_a_at 1432329_a_at33061.2310.0453No
33IL12A1425454_a_at33481.2220.0465No
34STK161426160_a_at33641.2190.0488No
35MAPK81420931_at 1420932_at 1437045_at 1440856_at 1457936_at34371.2030.0485No
36GRK11421361_at35051.1850.0484No
37TSSK31418557_s_at 1432397_at35621.1740.0487No
38FASTK1460635_at35651.1740.0516No
39PRKCZ1418085_at 1449692_at 1454902_at36541.1550.0504No
40F21418897_at38081.1280.0461No
41CDKN2A1450140_a_at38731.1170.0460No
42IL41449864_at40731.0820.0395No
43VRK21451929_a_at 1453343_s_at41381.0720.0392No
44LIMK11417627_a_at 1425836_a_at 1456234_at 1458989_at43691.0370.0312No
45JAK31425750_a_at 1446515_at45141.0190.0271No
46AURKC1449364_at45471.0160.0282No
47FES1427368_x_at 1452410_a_at45781.0120.0293No
48EPHB21425015_at 1425016_at 1442471_at 1445417_at 1454022_at46161.0090.0301No
49BARD11420594_at46971.0010.0289No
50TRIB21426640_s_at 1426641_at 1459852_x_at47140.9990.0307No
51PMVK1427893_a_at47590.9950.0311No
52IL31RA1445095_at 1451535_at49480.9730.0249No
53ACVR11416786_at 1416787_at 1448460_at 1457551_at49600.9720.0268No
54NUAK21429049_at49680.9710.0289No
55EIF2AK41421389_a_at 1443235_at50220.9620.0289No
56ROCK21423592_at 1451041_at50680.9560.0292No
57CCL21420380_at50800.9540.0311No
58MAST11432255_at 1449423_at51520.9440.0301No
59PGK21416784_at51680.9420.0318No
60MERTK1422869_at51770.9410.0338No
61HCLS11418842_at52440.9320.0331No
62BRSK21431826_a_at 1439329_a_at 1459639_at53140.9220.0322No
63ERBB21424919_at53810.9110.0314No
64MAPKAPK21426648_at56800.8720.0198No
65NDUFS41418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at57250.8650.0200No
66GMFB1417069_a_at 1431686_a_at 1431687_at 1448570_at 1448571_a_at58320.8510.0172No
67BCKDK1443813_x_at 1460644_at59370.8380.0145No
68JAK21421065_at 1421066_at60830.8220.0098No
69TSSK41432045_at 1432101_a_at 1438486_at 1443810_at61810.8070.0074No
70IL31450566_at62050.8040.0083No
71CDK91417269_at 1457240_at63580.7860.0033No
72STK111418644_a_at64750.771-0.0002No
73EREG1419431_at65210.765-0.0003No
74ALS2CR21433544_at 1442452_at66070.756-0.0024No
75BMP41422912_at66090.756-0.0005No
76ADAM101450104_at 1460083_at66310.7530.0004No
77MKNK11417630_at 1417631_at 1454119_at67390.741-0.0027No
78ERN21450139_at68440.729-0.0057No
79CD811416330_at68600.727-0.0046No
80SRPK11454042_a_at 1455107_at70100.709-0.0097No
81TNK11422721_at 1425634_a_at 1425635_at70180.708-0.0082No
82WNK41427196_at 1444133_at72170.686-0.0156No
83MAP3K31426686_s_at 1426687_at 1436522_at72440.683-0.0151No
84ACVRL11435825_at 1451604_a_at72530.682-0.0138No
85BRSK11439892_at73120.673-0.0148No
86BMPR1A1425491_at 1425492_at 1425493_at 1425494_s_at 1445413_at 1451729_at75100.650-0.0223No
87BTK1422755_at76100.640-0.0252No
88MAP3K91432981_at 1442218_at 1455684_at 1458922_at76510.636-0.0255No
89STK191417334_at76640.635-0.0245No
90MAP3K21422250_at77100.629-0.0250No
91PCTK21435143_at 1446130_at 1446272_at79430.606-0.0342No
92WNK31443924_at80570.593-0.0379No
93INSR1421380_at 1450225_at80980.589-0.0383No
94EGF1418093_a_at81590.584-0.0396No
95TYK21417306_at83840.561-0.0485No
96UHMK11446120_at 1454260_at84560.555-0.0504No
97MYLK1425504_at 1425505_at 1425506_at86260.537-0.0569No
98TESK21426546_at88930.512-0.0679No
99MAPK41435367_at89200.510-0.0678No
100NEK41427639_a_at 1449861_at89210.509-0.0665No
101CARD141450142_a_at89450.506-0.0663No
102PAK11420979_at 1420980_at 1450070_s_at 1459029_at90020.500-0.0677No
103KALRN1429796_at 1436066_at 1442341_at 1442554_s_at 1445900_at 1448023_at 1457690_at 1457899_at 1459065_at90740.492-0.0697No
104BMX1422084_at91540.484-0.0722No
105MAP3K131430137_at 1440749_at 1447699_at91740.482-0.0718No
106EPHA51420557_at 1437920_at 1444690_at93180.469-0.0773No
107IRAK31430704_at 1435040_at93530.465-0.0777No
108MAPK121447823_x_at 1449283_a_at95060.450-0.0836No
109ABL11423999_at 1441291_at 1444134_at 1445153_at96400.436-0.0886No
110IHPK11422968_at 1422969_s_at 1438845_at 1438846_x_at 1452694_at97360.427-0.0919No
111CCL111417789_at98100.420-0.0943No
112MKNK21418300_a_at 1449029_at98300.419-0.0941No
113NF21421820_a_at 1427708_a_at 1450382_at 1451829_a_at98710.415-0.0949No
114TSSK21449489_at98940.413-0.0949No
115PSEN11420261_at 1421853_at 1425549_at 1450399_at99590.405-0.0968No
116INHA1422728_at99850.402-0.0970No
117ICK1448310_at 1454243_at 1455687_at101410.389-0.1032No
118ERN11421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at101490.388-0.1025No
119IPPK1438019_at102010.383-0.1039No
120EIF2AK31430371_x_at 1449278_at 1453505_a_at102510.378-0.1052No
121TSSK61418956_at103190.372-0.1074No
122UQCRC21428631_a_at 1435757_a_at103950.366-0.1100No
123MARK41439051_a_at 1456618_at104370.361-0.1109No
124SNF1LK1419766_at 1459601_at104790.357-0.1119No
125ABL21445483_at 1447127_at104900.357-0.1115No
126IL201421608_at105250.354-0.1122No
127MYOD11418420_at 1447675_x_at106320.343-0.1162No
128PRKG21421354_at 1435162_at 1435460_at109350.313-0.1294No
129PRKD11422673_at110810.302-0.1353No
130STK101417751_at 1459736_at111550.296-0.1380No
131CAMK11417604_at112030.291-0.1394No
132TAF11447417_at 1455513_at 1458744_at113660.273-0.1462No
133SRPK21417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at114070.269-0.1474No
134ERG1425370_a_at 1440244_at115230.258-0.1521No
135PTK61442923_at 1450271_at115800.251-0.1540No
136BMPR1B1422872_at 1437312_at 1443720_s_at116350.246-0.1559No
137IGFBP31423062_at 1458268_s_at116740.241-0.1570No
138DMPK1422989_a_at 1434944_at118380.224-0.1640No
139CD801427717_at 1432826_a_at 1440592_at 1451950_a_at 1454372_at 1457952_at119810.210-0.1700No
140PRKCI1417410_s_at 1448695_at121040.200-0.1752No
141PRKCE1437860_at 1437861_s_at 1442609_at 1444649_at 1449956_at 1452878_at122280.189-0.1804No
142MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at123310.180-0.1846No
143MAP4K41422615_at 1440609_at 1448050_s_at 1459912_at123440.179-0.1847No
144UQCRH1452133_at 1453229_s_at123850.175-0.1862No
145TRIB11424880_at 1424881_at124430.169-0.1884No
146MAP3K101436373_at 1440500_at 1457456_at 1458651_at125760.157-0.1941No
147MAPK151441755_at127190.144-0.2003No
148STK38L1435877_at 1435878_at 1455183_at129010.126-0.2083No
149ROCK11423444_at 1423445_at 1441162_at 1446518_at 1450994_at 1460729_at129330.123-0.2094No
150EGFR1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at131050.105-0.2171No
151ACVR1B1422098_at 1433725_at135140.058-0.2358No
152MOBKL1A1430564_at 1455184_at135310.056-0.2364No
153PRKG11443663_at 1443811_at 1443812_x_at 1444232_at 1445807_at 1445998_at 1449876_at135460.055-0.2369No
154MAP4K31444406_at136560.044-0.2418No
155SGK31420918_at 1420919_at 1450036_at138320.024-0.2498No
156IHPK31443503_at138730.020-0.2516No
157STK361434733_at 1453584_at139390.014-0.2546No
158INHBA1422053_at 1458291_at139900.008-0.2569No
159ERC11421501_a_at 1424247_at 1441493_at 1444356_at 1451279_at140320.003-0.2588No
160FRK1421362_a_at 1426569_a_at 1426570_a_at 1436413_at 1440948_at14267-0.024-0.2695No
161CSNK1G21423370_a_at14353-0.033-0.2733No
162TDGF11450989_at14482-0.051-0.2791No
163TOLLIP1423047_at 1423048_a_at14502-0.054-0.2799No
164MARK11419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at14785-0.089-0.2927No
165MAPK31427060_at14832-0.095-0.2946No
166LIPE1422820_at14864-0.099-0.2957No
167PKN31434525_at14955-0.110-0.2996No
168PXK1451253_at15349-0.167-0.3174No
169CDKN2B1449152_at15380-0.170-0.3183No
170CDKL11429664_at 1453231_at15419-0.178-0.3196No
171LATS21419678_at 1419679_at 1425420_s_at 1426156_at 1437101_at 1439441_x_at15502-0.189-0.3229No
172DYRK1B1422254_a_at15566-0.199-0.3254No
173MYO3A1431983_at15603-0.205-0.3265No
174CBLC1422666_at 1431692_a_at15714-0.220-0.3310No
175LATS11427679_at 1460264_at15793-0.232-0.3341No
176EIF2AK11421900_at 1421901_at 1430696_at 1436006_at 1453902_at15924-0.258-0.3394No
177RAF11416078_s_at 1425419_a_at15969-0.268-0.3408No
178CCND31415907_at 1437584_at 1444323_at 1446567_at 1447434_at 1457549_at15986-0.270-0.3408No
179MARK21415952_at 1415953_s_at 1435889_at 1444303_at16002-0.272-0.3409No
180PLK41419838_s_at 1426580_at 1452115_a_at16050-0.281-0.3423No
181TGFBR11420893_a_at 1420894_at 1420895_at 1446946_at16199-0.309-0.3484No
182NEK61451043_at16201-0.309-0.3477No
183ERBB31434606_at 1452482_at16241-0.318-0.3487No
184NEK111441525_at 1445012_at16460-0.360-0.3578No
185CAMK2A1437125_at 1441734_at 1442707_at 1443876_at 1452453_a_at 1457311_at16667-0.410-0.3663No
186BRAF1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at16748-0.432-0.3689No
187CDC2L11418841_s_at16810-0.445-0.3706No
188CDC42BPB1434652_at 1459167_at16979-0.492-0.3772No
189CD241416034_at 1437502_x_at 1448182_a_at16992-0.494-0.3765No
190AKT31422078_at 1435260_at 1435879_at 1443222_at 1460307_at17013-0.498-0.3762No
191CAMKK21424474_a_at 1424475_at 1424476_at 1455401_at17025-0.500-0.3754No
192TAOK31435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at17057-0.508-0.3756No
193DAPK11426915_at 1427358_a_at 1445032_at17095-0.521-0.3760No
194RPS6KA51431050_at 1437625_at 1439004_at 1440343_at17099-0.522-0.3748No
195MAPK61419168_at 1419169_at 1429963_at 1459146_at17138-0.530-0.3753No
196PKN21437295_at 1437296_at17149-0.532-0.3744No
197CTBP11415702_a_at17157-0.535-0.3734No
198PRKX1424286_at 1424287_at 1451299_at17212-0.552-0.3745No
199CAMK2B1448676_at 1455869_at17215-0.553-0.3732No
200ILK1449942_a_at17410-0.609-0.3806No
201PRKCD1422847_a_at 1442256_at17719-0.705-0.3931No
202DAPK31423446_at 1456496_at17746-0.714-0.3925No
203CCNT11419313_at 1456477_at17749-0.716-0.3908No
204STK41421107_at 1434159_at 1436015_s_at17836-0.748-0.3929No
205BCL101418970_a_at 1418971_x_at 1418972_at 1443524_x_at17917-0.775-0.3947No
206PLK31434496_at18029-0.819-0.3977No
207PRKAA11437539_at18123-0.851-0.3999No
208MINK11449362_a_at18240-0.893-0.4030No
209UQCRB1416337_at 1455997_a_at18297-0.912-0.4033No
210PRKCH1422079_at 1434248_at18329-0.922-0.4025No
211CAMK41421941_at 1426167_a_at 1439843_at 1442822_at 1452572_at18485-0.974-0.4072Yes
212ABI31446191_at 1452928_at18488-0.975-0.4048Yes
213PRKD31420567_at 1428229_at 1428230_at 1444691_at18552-0.994-0.4053Yes
214TLK11439158_at 1444730_at 1455024_at 1456407_a_at 1460002_at18572-1.000-0.4036Yes
215CLCF11437270_a_at 1437271_at 1450262_at18629-1.017-0.4037Yes
216PRKCB11423478_at 1438981_at 1443144_at 1459674_at 1460419_a_at18634-1.019-0.4013Yes
217IHPK21428373_at 1435319_at18675-1.030-0.4006Yes
218CSNK1A11424827_a_at 1428537_at 1430529_at 1451497_at 1456216_at18762-1.064-0.4019Yes
219LCK1425396_a_at 1439145_at 1439146_s_at 1457917_at18832-1.093-0.4024Yes
220IRAK21436507_at18879-1.112-0.4017Yes
221MAP3K121417115_at 1438908_at 1456565_s_at18898-1.119-0.3997Yes
222MAP3K81419208_at18980-1.164-0.4006Yes
223PKN11458674_at 1459231_at18991-1.167-0.3981Yes
224GLMN1418839_at19143-1.237-0.4020Yes
225HCK1446553_at 1449455_at19184-1.256-0.4007Yes
226TLK21416944_a_at 1431827_a_at 1454018_at 1457357_at19291-1.314-0.4023Yes
227CSNK1D1415825_s_at 1418889_a_at 1437690_x_at 1444378_at 1449932_at 1456727_a_at19364-1.355-0.4023Yes
228TNKS1432630_at 1433778_at 1445358_at 1459910_at19414-1.386-0.4011Yes
229PRPF4B1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at19505-1.448-0.4016Yes
230FRAP11417592_at 1436267_a_at 1446185_at 1459625_at19511-1.453-0.3982Yes
231LMTK21439871_at 1455018_at 1459531_at19670-1.555-0.4016Yes
232PICK11419384_at19674-1.555-0.3979Yes
233MAP3K111450669_at19775-1.630-0.3984Yes
234CSNK2A11419034_at 1419035_s_at 1419036_at 1419037_at 1419038_a_at 1453427_at19827-1.666-0.3966Yes
235OXSR11426933_at19829-1.667-0.3925Yes
236PCTK11415956_a_at 1438314_at 1443296_at 1460169_a_at19853-1.685-0.3893Yes
237SRP721428876_at 1428877_at19909-1.728-0.3875Yes
238CDC42BPG1436197_at19988-1.796-0.3867Yes
239TNK21448298_at20121-1.898-0.3880Yes
240CSNK1E1417175_at 1417176_at 1435373_at20181-1.956-0.3858Yes
241CDC42BPA1435847_at 1436380_at 1438449_at 1442260_at 1446945_at20225-1.983-0.3829Yes
242PRKAG11417690_at 1433533_x_at 1457803_at20271-2.010-0.3799Yes
243CRKRS1425555_at 1425556_at 1438831_at 1440858_at 1443294_at 1455567_at 1455964_at20289-2.019-0.3757Yes
244ULK11416504_at 1448370_at20332-2.045-0.3725Yes
245PIK3R11425514_at 1425515_at 1438682_at 1444591_at 1451737_at20549-2.262-0.3768Yes
246PTK2B1434653_at 1442437_at 1442927_at20564-2.279-0.3718Yes
247CHUK1417091_at 1428210_s_at 1451383_a_at20599-2.328-0.3675Yes
248PINK11441937_s_at 1451148_at20674-2.415-0.3649Yes
249PIM11423006_at 1435458_at20778-2.545-0.3633Yes
250DYRK1A1426226_at 1428299_at 1451977_at20822-2.614-0.3587Yes
251DYRK21428637_at 1436918_at 1456502_at 1457667_x_at20840-2.640-0.3529Yes
252PRKACB1420610_at 1420611_at 1457197_at20875-2.702-0.3477Yes
253ABI21433985_at 1436984_at 1444783_at 1458053_at 1460153_at20908-2.737-0.3424Yes
254PNKP1416378_at20999-2.902-0.3393Yes
255STK381416252_at 1431303_at 1439938_at21000-2.905-0.3320Yes
256PDPK11415729_at 1416501_at 1459775_at 1459776_x_at21016-2.941-0.3254Yes
257RAD171448762_at21141-3.207-0.3231Yes
258CDKN2D1416253_at21200-3.369-0.3173Yes
259SNRK1425678_a_at 1448864_at21281-3.578-0.3121Yes
260CDKN1B1419497_at 1434045_at21335-3.754-0.3051Yes
261FYB1452117_a_at21343-3.791-0.2960Yes
262SOCS11440047_at 1450446_a_at21397-3.962-0.2885Yes
263ITGB21450678_at21451-4.165-0.2806Yes
264PIM21417216_at21501-4.380-0.2719Yes
265MAP4K21428297_at 1434833_at 1450244_a_at21516-4.429-0.2614Yes
266F2R1437308_s_at 1450852_s_at21525-4.493-0.2506Yes
267IKBKE1417813_at21549-4.656-0.2400Yes
268PAK21434250_at 1454887_at21587-4.997-0.2292Yes
269ABI11423177_a_at 1423178_at 1450890_a_at21623-5.269-0.2177Yes
270HIPK31419191_at 1426819_at21625-5.287-0.2045Yes
271TXK1425785_a_at21639-5.371-0.1917Yes
272TGFB11420653_at 1445360_at21716-6.029-0.1801Yes
273STK17B1423452_at 1430165_at 1450997_at21734-6.237-0.1653Yes
274STAT11420915_at 1440481_at 1450033_a_at 1450034_at21776-6.782-0.1502Yes
275GMFG1419193_a_at 1419194_s_at21822-7.322-0.1340Yes
276GSK3B1434439_at 1437001_at 1439931_at 1439949_at 1451020_at 1454958_at21863-7.710-0.1166Yes
277CCND21416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at21869-7.737-0.0975Yes
278IGF1R1426565_at 1437219_at 1443566_at 1445600_at 1445664_at 1446303_at21884-7.807-0.0786Yes
279CDKN2C1416868_at 1439164_at21886-7.816-0.0591Yes
280WNK11433676_at 1436746_at 1437888_at 1439970_at21900-7.915-0.0399Yes
281TEC1441524_at 1460204_at21920-8.186-0.0204Yes
282AURKA1424511_at 1440129_at21932-8.4210.0002Yes
Table: GSEA details [plain text format]



Fig 2: PHOSPHORYLATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PHOSPHORYLATION: Random ES distribution   
Gene set null distribution of ES for PHOSPHORYLATION