DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classSCID
GeneSetMITOCHONDRION
Enrichment Score (ES)0.49176797
Normalized Enrichment Score (NES)2.1543705
Nominal p-value0.0
FDR q-value2.7977212E-4
FWER p-Value0.0020
Table: GSEA Results Summary



Fig 1: Enrichment plot: MITOCHONDRION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MRPS221416595_at 1443032_at187.9860.0150Yes
2TIMM501441819_x_at 1455456_a_at197.9850.0309Yes
3NFS11416373_at 1431431_a_at 1442017_at287.8140.0461Yes
4GOT21417715_a_at 1417716_at1425.4050.0516Yes
5MRPS101428153_at 1458999_at1455.3270.0621Yes
6HSPE11450668_s_at1525.2760.0723Yes
7FXN1427282_a_at1745.0530.0814Yes
8NDUFS71424313_a_at 1451312_at2194.6330.0886Yes
9DUT1419269_at 1419270_a_at2614.3780.0954Yes
10ATP5G11416020_a_at 1444874_at2724.3040.1035Yes
11BID1417045_at 1447873_x_at 1448560_at2944.1410.1107Yes
12TIMM101417499_at3233.9740.1173Yes
13SDHD1428235_at 1437489_x_at3243.9730.1252Yes
14ATP5G21415980_at 1456128_at3253.9670.1331Yes
15MIPEP1428290_at 1459294_at3613.8540.1392Yes
16ABCB61422524_at3783.7930.1460Yes
17CS1422577_at 1422578_at 1450667_a_at3903.7450.1529Yes
18CYC11416604_at3923.7420.1603Yes
19ATP5E1416567_s_at4463.5930.1650Yes
20FDXR1416806_at4493.5860.1720Yes
21MTCH11460718_s_at4523.5770.1790Yes
22HSPA1B1427126_at 1427127_x_at 1452318_a_at4613.5530.1857Yes
23COQ71416665_at4733.5200.1922Yes
24PTGES21417591_at4823.4860.1988Yes
25COQ61426902_at4873.4650.2055Yes
26SDHB1418005_at5023.4170.2116Yes
27HADH1436756_x_at 1455972_x_at 1460184_at5263.3580.2172Yes
28MRPL551429453_a_at5283.3510.2239Yes
29MRPS151430100_at 1449294_at 1456109_a_at5383.3290.2301Yes
30MRPL231416948_at5493.2900.2361Yes
31VDAC31416175_a_at5513.2840.2426Yes
32ECHS11452341_at5943.1910.2470Yes
33ETFB1428181_at6153.1530.2524Yes
34MRPL121452048_at6423.0750.2573Yes
35MRPS361423242_at6563.0440.2627Yes
36NDUFA91416663_at6832.9720.2674Yes
37NDUFV11415966_a_at 1415967_at 1456015_x_at7232.8910.2714Yes
38MRPS351452111_at7312.8750.2768Yes
39MRPS281452585_at7342.8710.2824Yes
40SUCLG11415891_at7542.8310.2871Yes
41FOXRED11451354_at7562.8270.2927Yes
42BCS1L1451541_at7592.8210.2982Yes
43NDUFA41424085_at8602.6650.2989Yes
44MTHFD11415916_a_at 1415917_at 1436704_x_at9082.5770.3018Yes
45GPX41451695_a_at9582.5030.3046Yes
46MRPS161448869_a_at9692.4870.3090Yes
47COX7A11418709_at9832.4720.3134Yes
48UQCRC11428782_a_at9882.4640.3181Yes
49PTS1450660_at 1458402_at9902.4600.3229Yes
50AMACR1417208_at10102.4300.3269Yes
51BAX1416837_at10462.3960.3300Yes
52NDUFB61434056_a_at 1434057_at10472.3940.3348Yes
53TIMM131455211_a_at10502.3910.3394Yes
54TSFM1432170_at 1452698_at10592.3760.3438Yes
55IDH21450048_a_at 1458383_at10732.3560.3479Yes
56ACO21436934_s_at 1442102_at 1451002_at10962.3210.3515Yes
57MRPS18C1427901_at11712.2330.3525Yes
58NDUFA81423692_at11822.2250.3564Yes
59ATP5O1416278_a_at11862.2210.3607Yes
60ETFA1423972_at11912.2160.3649Yes
61SUPV3L11432623_at 1460557_at12182.1940.3681Yes
62PITRM11426453_at 1456577_x_at12532.1670.3708Yes
63TRMU1430828_at 1452786_at13082.1250.3726Yes
64ABCB81422015_a_at 1423713_at 1460022_at13572.0880.3745Yes
65OAT1416452_at13602.0850.3785Yes
66CYCS1422484_at 1445484_at13612.0840.3827Yes
67ACN91456614_at13642.0810.3867Yes
68ACADS1460216_at13722.0770.3905Yes
69NDUFS81423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at13842.0700.3941Yes
70MRPL401448849_at13862.0680.3982Yes
71ALDH4A11452375_at14312.0350.4002Yes
72TRNT11425561_at 1425562_s_at14362.0340.4041Yes
73IDH3B1418885_a_at 1418886_s_at 1441271_at14392.0320.4080Yes
74TRIAP11460702_at14592.0180.4112Yes
75HAX11426187_a_at14722.0120.4146Yes
76SLC25A11428190_at15012.0010.4173Yes
77ATP5F11426742_at 1433562_s_at15241.9920.4202Yes
78GHITM1415881_at 1415882_at 1447504_at15311.9880.4239Yes
79PCCB1450969_at15671.9730.4262Yes
80DNAJC191423625_a_at 1425372_at15961.9580.4288Yes
81PET112L1424282_at 1444502_at16051.9490.4323Yes
82ECSIT1417080_a_at16061.9490.4362Yes
83TIMM231416485_at16271.9370.4391Yes
84GRPEL11417320_at16381.9330.4425Yes
85VDAC11415998_at 1436992_x_at 1437192_x_at 1437452_x_at 1437947_x_at17191.8910.4426Yes
86SARS21448522_at17321.8830.4457Yes
87COX6B21435275_at17401.8780.4492Yes
88MTHFD21419253_at 1419254_at17481.8740.4526Yes
89MRPS121448799_s_at17801.8540.4548Yes
90ACAT11421558_at 1424182_at 1424183_at 1451271_a_at17881.8510.4582Yes
91NME41416798_a_at18321.8220.4598Yes
92SOD21417193_at 1417194_at 1442994_at 1444531_at 1448610_a_at 1454976_at18421.8150.4630Yes
93FPGS1460673_at18551.8080.4660Yes
94NDUFA61448427_at18791.7950.4685Yes
95NT5M1453767_a_at19451.7610.4690Yes
96TOMM221429103_at 1434420_x_at19671.7470.4715Yes
97PHB1435144_at 1442233_at 1448563_at20791.6820.4698Yes
98SLC25A31416300_a_at 1440302_at20881.6750.4727Yes
99LETM11420825_at 1420826_at 1460284_at21331.6530.4740Yes
100PDHA11418560_at 1446954_at 1449137_at21341.6530.4773Yes
101ATP5J1416143_at21551.6420.4796Yes
102SDHC1435986_x_at 1448630_a_at21681.6360.4823Yes
103NDUFS21451096_at22231.6100.4830Yes
104MRPS211422451_at22651.5870.4843Yes
105AFG3L21427206_at 1427207_s_at 1454003_at22851.5760.4865Yes
106SLC25A151420966_at 1420967_at23431.5470.4870Yes
107ATP5B1416829_at23611.5390.4892Yes
108DGUOK1425228_a_at23731.5350.4918Yes
109POLG21450816_at24891.4800.4894No
110NDUFA21417368_s_at27041.4020.4823No
111TMEM126A1451000_at27091.4010.4849No
112MPV171420387_at27231.3950.4871No
113BZRAP11455771_at27701.3810.4877No
114MTX21430500_s_at27721.3810.4904No
115ATP5A11420037_at 1423111_at 1449710_s_at28861.3460.4878No
116NDUFS31423737_at29351.3300.4883No
117NDUFA11422241_a_at29551.3240.4900No
118TIMM91428010_at 1449886_a_at29881.3150.4912No
119ABCF21423863_at32401.2450.4820No
120OXCT11436750_a_at 1449059_a_at 1455804_x_at34091.2100.4767No
121TP531426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at34171.2080.4788No
122TIMM17A1426256_at36571.1540.4700No
123TIMM8B1431665_a_at36941.1480.4706No
124VDAC21415990_at37051.1470.4724No
125PDK31426410_at38541.1190.4678No
126LDHD1428613_at 1428614_at38891.1150.4685No
127HSD3B21425127_at39091.1120.4698No
128MAOB1434354_at40081.0910.4674No
129MSTO11424577_at40171.0900.4692No
130COX111429188_at 1457846_at40911.0780.4680No
131CPT1A1434866_x_at 1438156_x_at 1460409_at41211.0730.4688No
132TXNRD21429971_at 1429972_s_at 1449097_at 1451936_a_at42301.0560.4659No
133ATP5D1423716_s_at 1456580_s_at42611.0520.4666No
134BDH21453011_at42851.0480.4676No
135COX4NB1434952_at 1448677_at42991.0460.4691No
136TUFM1433952_at 1449673_s_at43871.0340.4672No
137ATP5C11416058_s_at 1438809_at47750.9920.4512No
138PHB21416202_at 1438938_x_at 1455713_x_at 1460035_at50950.9520.4384No
139GCDH1448717_at51070.9510.4398No
140SLC25A121428440_at 1444489_at53250.9200.4316No
141CASP81424552_at53680.9120.4315No
142UCP31420657_at 1420658_at54420.9030.4299No
143MRPS241438563_s_at 1450865_s_at54480.9020.4314No
144MRPL101418112_at54670.9000.4324No
145NDUFS11425143_a_at 1453354_at55240.8920.4316No
146MFN21441424_at 1448131_at 1451900_at56080.8820.4295No
147NDUFS41418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at57250.8650.4259No
148DHRS41419382_a_at 1451559_a_at58950.8440.4197No
149DMGDH1444259_at 1452311_at59000.8430.4212No
150BCKDK1443813_x_at 1460644_at59370.8380.4212No
151OXSM1419973_at 1429699_at 1441514_at 1449684_at 1449685_s_at 1455395_at60810.8220.4162No
152CPT1B1418328_at64090.7800.4027No
153TIMM441417670_at 1439371_x_at 1448801_a_at65230.7650.3990No
154HSD3B11448453_at65650.7600.3986No
155FIBP1422516_a_at 1430171_at 1438923_at 1438924_x_at65930.7570.3989No
156FDX11449108_at68870.7230.3868No
157HSPD11426351_at73410.6690.3672No
158PECI1431012_a_at73770.6650.3669No
159CLN31417551_at 1457789_at74940.6510.3628No
160COX8C1443789_x_at 1455167_at76890.6310.3551No
161ATP5G31454661_at77320.6270.3544No
162FIS11416764_at 1443819_x_at78660.6140.3495No
163PCK21425615_a_at 1452620_at79190.6080.3483No
164DNAJA31420629_a_at 1432066_at 1449935_a_at81610.5840.3383No
165SLC25A131449481_at82420.5760.3357No
166TFAM1448224_at 1456215_at83270.5670.3330No
167NDUFA111429708_at 1444154_at83740.5630.3320No
168SMCP1418358_at83800.5620.3329No
169SPG71441585_at84140.5580.3324No
170TIMM17B1438656_x_at 1460685_at84650.5530.3312No
171PTRF1421431_at 1424130_a_at 1453891_at86600.5340.3233No
172CENTA21425638_at88570.5150.3153No
173L2HGDH1424858_at89720.5030.3110No
174NDUFA131430713_s_at90070.4990.3105No
175ACADSB1455446_x_at91320.4860.3057No
176TFB2M1423441_at91550.4840.3056No
177ARG21418847_at 1438841_s_at95090.4500.2902No
178ALDH5A11453065_at95530.4460.2891No
179GLS21435245_at95890.4420.2884No
180CKMT21428722_at97010.4300.2841No
181MUT1416838_at 1416839_at 1448486_at98110.4200.2799No
182SURF11450561_a_at98430.4170.2793No
183CPS11455540_at98760.4150.2786No
184ABAT1433855_at99140.4110.2778No
185PSEN11420261_at 1421853_at 1425549_at 1450399_at99590.4050.2765No
186GLYAT1424867_a_at 1424868_at 1451515_s_at99790.4030.2764No
187POLRMT1437377_a_at 1452835_a_at103810.3670.2586No
188ACP61444410_at 1448445_at104080.3640.2582No
189GLUD11416209_at 1448253_at104390.3610.2575No
190MSRB31439151_at 1454997_at105350.3530.2538No
191MRPS311417737_at 1443165_at106240.3430.2504No
192SOD11435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at106880.3360.2482No
193BNIP31422470_at110320.3060.2329No
194ASAH21425994_a_at 1450726_at 1458849_at110470.3040.2329No
195SARDH1416662_at 1445591_at 1448426_at111290.2980.2297No
196BCL2L101416434_at113010.2810.2224No
197OXA1L1423738_at 1451088_a_at 1456845_at113020.2810.2230No
198MRPL521415761_at 1415762_x_at 1455366_at 1460701_a_at114680.2640.2159No
199NR3C11421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at115570.2540.2123No
200ME31429071_at116110.2490.2103No
201BCKDHB1427153_at116170.2480.2106No
202MRPS111455233_at 1460195_at117020.2390.2072No
203PDK41417273_at117360.2350.2061No
204MRPL321424372_at118890.2180.1996No
205SLC25A271431201_at 1440090_at 1454230_a_at 1458119_at122970.1820.1811No
206UQCRH1452133_at 1453229_s_at123850.1750.1774No
207CKMT1A1417089_a_at 1432418_a_at124350.1700.1755No
208PMPCA1424661_at 1424662_at124990.1650.1729No
209NAPG1424069_at 1424070_at 1443366_at126770.1480.1650No
210SDHA1426688_at 1426689_s_at 1445317_at127090.1450.1639No
211CCDC391429780_at 1429781_s_at 1436581_at 1440504_at 1456430_at127820.1390.1608No
212ACOT21422996_at 1439478_at134450.0660.1304No
213SCO11430300_at134860.0610.1287No
214GLRX51428553_at137510.0330.1165No
215AK31423717_at 1423718_at 1432436_a_at 1458812_at137660.0310.1159No
216CASQ11422598_at138530.0230.1120No
217ESR21426103_a_at14170-0.0130.0974No
218BPHL1420235_at 1424242_at 1430531_at14232-0.0200.0947No
219AGPAT51434287_at 1453257_at14296-0.0270.0918No
220LRPPRC1424353_at14309-0.0290.0913No
221AASS1423523_at 1445042_at14407-0.0410.0869No
222ACADVL1424184_at14479-0.0510.0837No
223MRPL411428588_a_at 1428589_at 1428590_at14561-0.0600.0801No
224POLG1423272_at 1423273_at 1437564_at14658-0.0730.0758No
225HINT21425196_a_at14664-0.0740.0757No
226GBAS1419484_a_at 1444503_at 1446137_at14679-0.0760.0752No
227SLC25A221452653_at14904-0.1040.0651No
228SLC22A41417639_at14999-0.1160.0610No
229ABCE11416014_at 1416015_s_at 1442071_at15254-0.1520.0495No
230BCL2L11420887_a_at 1420888_at 1426050_at 1426191_a_at15347-0.1660.0456No
231TMEM1431442690_at 1451304_at15524-0.1930.0379No
232RAF11416078_s_at 1425419_a_at15969-0.2680.0179No
233IMMT1429533_at 1429534_a_at 1433470_a_at 1437126_at15970-0.2680.0184No
234GATM1423569_at16274-0.3250.0051No
235NDUFS51416494_at 1416495_s_at16403-0.349-0.0002No
236MTERF1429698_at16440-0.356-0.0011No
237ATPIF11434198_at 1448770_a_at 1453681_at16594-0.391-0.0074No
238BCKDHA1416647_at16697-0.419-0.0113No
239TRAK11428327_at 1446015_at 1452742_at 1456755_at 1459666_at16785-0.440-0.0144No
240SLC25A41424562_a_at 1424563_at 1434897_a_at 1455069_x_at16947-0.483-0.0209No
241GLRX21422998_a_at 1437679_a_at 1437680_x_at17010-0.497-0.0228No
242HTRA21436269_s_at 1460495_s_at17121-0.526-0.0268No
243SLC25A141417154_at17352-0.593-0.0363No
244COX151426693_x_at 1437982_x_at 1452146_a_at 1460376_a_at17448-0.622-0.0394No
245SLC9A61435008_at 1435009_at17560-0.663-0.0432No
246HADHB1437172_x_at17671-0.693-0.0469No
247GSTZ11427552_a_at 1458134_at17686-0.697-0.0462No
248RAB11FIP51427405_s_at 1434314_s_at17753-0.717-0.0478No
249SUCLA21430402_at 1452206_at17817-0.742-0.0493No
250DIABLO1417683_at 1425768_at17822-0.743-0.0480No
251PPOX1416618_at 1441862_at 1448065_at17894-0.769-0.0497No
252CPOX1422492_at 1422493_at 1440747_at17896-0.769-0.0482No
253COQ41435231_at17949-0.786-0.0491No
254ABCB71419931_at 1427490_at 1435006_s_at18058-0.832-0.0524No
255PMAIP11418203_at18072-0.835-0.0514No
256OGDH1445632_at 1451274_at18163-0.867-0.0538No
257UQCRB1416337_at 1455997_a_at18297-0.912-0.0581No
258PRDX51416381_a_at18318-0.918-0.0572No
259BAK11418991_at 1425716_s_at18346-0.929-0.0566No
260TBRG41417658_at 1442793_s_at 1448795_a_at 1448796_s_at18484-0.974-0.0610No
261RHOT11423533_a_at 1440853_at18559-0.996-0.0625No
262MRPL511416877_a_at 1416878_at 1416879_at18605-1.008-0.0625No
263MRPS18A1416984_at 1457813_at19155-1.245-0.0854No
264NDUFAB11428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at19271-1.302-0.0882No
265NNT1416105_at 1432608_at 1456573_x_at19316-1.330-0.0876No
266DLD1423159_at19379-1.366-0.0877No
267BBC31423315_at19425-1.393-0.0870No
268MYLC2PL1420805_at19462-1.417-0.0859No
269MTIF21415685_at19488-1.436-0.0842No
270HCCS1420889_at 1420890_at19568-1.484-0.0849No
271CLPX1423447_at 1439342_at19682-1.560-0.0870No
272MCL11416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at19804-1.648-0.0893No
273TOMM341448345_at19916-1.733-0.0910No
274MECR1417097_at 1417098_s_at 1440553_at19983-1.793-0.0905No
275OPA11418768_at 1434890_at 1449214_a_at20236-1.993-0.0981No
276HMGCS21423858_a_at 1431833_a_at20242-1.995-0.0944No
277SHMT21426423_at 1434204_x_at 1455084_x_at 1455985_x_at20408-2.106-0.0979No
278MOSC21416766_at20491-2.193-0.0973No
279PINK11441937_s_at 1451148_at20674-2.415-0.1009No
280ACOT91418073_at20698-2.441-0.0971No
281NIPSNAP11448465_at 1456748_a_at20737-2.497-0.0939No
282MSRB21424433_at20811-2.598-0.0921No
283RHOT21426822_at20972-2.853-0.0938No
284DBT1440016_at 1449118_at21157-3.247-0.0959No
285SLC25A111426586_at21160-3.255-0.0895No
286CASP71426062_a_at 1448659_at21233-3.447-0.0860No
287ALAS21451675_a_at21415-4.037-0.0863No
288BCL21422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at21497-4.358-0.0814No
289ACADM1415984_at21553-4.696-0.0746No
290CHCHD31431241_at 1437599_at 1451504_at 1459143_at21668-5.587-0.0688No
291DECR11419367_at 1449443_at21703-5.923-0.0586No
292CRY11433733_a_at21708-5.979-0.0469No
293BCAT21425764_a_at21745-6.347-0.0359No
294BNIP3L1416922_a_at 1416923_a_at 1448525_a_at21783-6.883-0.0239No
295PDK11423747_a_at 1423748_at 1434974_at 1435836_at21874-7.752-0.0127No
296PGS11430429_at 1440367_at 1454045_a_at 1454046_x_at 1455229_x_at21881-7.7930.0025No
Table: GSEA details [plain text format]



Fig 2: MITOCHONDRION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MITOCHONDRION: Random ES distribution   
Gene set null distribution of ES for MITOCHONDRION