Details for gene set INFLAMMATORY

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	INFLAMMATORY_RESPONSE
Enrichment Score (ES)	-0.4610204
Normalized Enrichment Score (NES)	-1.7189342
Nominal p-value	0.0
FDR q-value	0.2021344
FWER p-Value	0.971

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CEBPB	1418901_at 1427844_a_at	270	4.311	0.0182	No
2	SCYE1	1416486_at	965	2.494	0.0041	No
3	TPST1	1421733_a_at	1325	2.112	0.0026	No
4	PTX3	1418666_at 1456903_at	1423	2.040	0.0126	No
5	IL5	1425546_a_at 1442049_at 1450550_at	1813	1.839	0.0079	No
6	AHSG	1455093_a_at	1979	1.741	0.0127	No
7	ADORA2A	1427519_at 1460710_at	2026	1.709	0.0227	No
8	TACR1	1422282_at	2549	1.453	0.0091	No
9	CCL3	1419561_at	2591	1.439	0.0174	No
10	AGER	1420428_at 1441958_s_at	2624	1.428	0.0260	No
11	C3AR1	1419482_at 1419483_at 1442082_at	2787	1.376	0.0284	No
12	PTAFR	1427871_at 1427872_at	2975	1.319	0.0292	No
13	CXCL1	1419209_at 1441855_x_at 1457644_s_at	3009	1.309	0.0369	No
14	PLA2G2E	1420674_at	3170	1.261	0.0386	No
15	PLA2G7	1430700_a_at	3424	1.207	0.0355	No
16	HDAC9	1421306_a_at 1434572_at	4559	1.014	-0.0092	No
17	IL9	1450565_at	4771	0.992	-0.0119	No
18	C2	1416051_at 1441912_x_at 1457664_x_at	5321	0.921	-0.0305	No
19	IL18RAP	1421291_at 1456545_at	5542	0.890	-0.0343	No
20	IL1RAP	1421843_at 1439697_at 1442614_at 1449585_at	5971	0.835	-0.0480	No
21	CCR5	1422259_a_at 1422260_x_at 1424727_at	6179	0.807	-0.0517	No
22	SCG2	1450708_at	6330	0.789	-0.0530	No
23	GHSR	1446756_at	6469	0.771	-0.0538	No
24	CXCL2	1449984_at	6533	0.764	-0.0513	No
25	GHRL	1448980_at	6974	0.714	-0.0664	No
26	ABCF1	1420157_s_at 1420158_s_at 1426921_at 1427444_at 1452236_at 1452429_s_at	7177	0.691	-0.0708	No
27	CCL24	1450488_at	7417	0.661	-0.0770	No
28	ELF3	1416916_at	7458	0.656	-0.0742	No
29	LBP	1448550_at	7751	0.625	-0.0832	No
30	KNG1	1416676_at 1426045_at	7968	0.603	-0.0888	No
31	APCS	1419059_at	8037	0.596	-0.0877	No
32	RIPK2	1421236_at 1450173_at	9165	0.482	-0.1359	No
33	PLA2G2D	1418987_at 1454157_a_at	9262	0.475	-0.1369	No
34	CX3CL1	1415803_at 1415804_at 1421610_at 1441884_x_at	9497	0.451	-0.1444	No
35	IFNA2	1423028_at	9546	0.446	-0.1435	No
36	CCL11	1417789_at	9810	0.420	-0.1525	No
37	AOX1	1419435_at	10031	0.398	-0.1598	No
38	IL13	1420802_at	10032	0.398	-0.1570	No
39	FPRL1	1421661_at 1450583_s_at	10203	0.383	-0.1620	No
40	ORM2	1420438_at	10394	0.366	-0.1682	No
41	IL20	1421608_at	10525	0.354	-0.1716	No
42	NFATC4	1423380_s_at 1432821_at 1454369_a_at	10798	0.325	-0.1818	No
43	ORM1	1451054_at	10884	0.317	-0.1834	No
44	CHRNA7	1440681_at 1450299_at	10906	0.316	-0.1821	No
45	ADORA1	1427331_at 1435495_at	11175	0.294	-0.1923	No
46	CFHR1	1419436_at	11577	0.251	-0.2089	No
47	IL8RB	1421734_at	11705	0.238	-0.2130	No
48	BLNK	1451780_at	11797	0.229	-0.2156	No
49	F11R	1424595_at 1436374_x_at	11896	0.218	-0.2185	No
50	CCR2	1421186_at 1421187_at 1421188_at 1460067_at	11984	0.210	-0.2210	No
51	SELE	1421712_at	12540	0.161	-0.2453	No
52	CRP	1421946_at	12604	0.155	-0.2471	No
53	EDG3	1437173_at 1438658_a_at 1460661_at	12616	0.154	-0.2465	No
54	AOAH	1450764_at 1460156_at	12651	0.150	-0.2470	No
55	CCL4	1421578_at	12786	0.139	-0.2522	No
56	TNFAIP6	1418424_at	12877	0.128	-0.2554	No
57	ALOX5AP	1452016_at 1459234_at	12889	0.128	-0.2550	No
58	IL1A	1421473_at	12916	0.125	-0.2553	No
59	AOC3	1449396_at	12999	0.116	-0.2582	No
60	MEFV	1460283_at	13113	0.104	-0.2627	No
61	NOX4	1419161_a_at 1451827_a_at	13309	0.080	-0.2710	No
62	CCR1	1419609_at 1419610_at	13355	0.076	-0.2725	No
63	CCL20	1422029_at	13409	0.070	-0.2745	No
64	CXCL11	1419697_at 1419698_at	13752	0.033	-0.2899	No
65	CCL5	1418126_at	14078	-0.001	-0.3048	No
66	MBL2	1418787_at	14249	-0.022	-0.3124	No
67	CHST2	1422758_at 1460070_at	14688	-0.077	-0.3319	No
68	XCR1	1422294_at	14891	-0.102	-0.3405	No
69	IL10RB	1419455_at	15132	-0.134	-0.3505	No
70	HRH1	1419210_at 1438494_at	15548	-0.196	-0.3681	No
71	LTB4R	1420407_at	15637	-0.209	-0.3707	No
72	KLRG1	1420788_at	15996	-0.271	-0.3852	No
73	MGLL	1426785_s_at 1431331_at 1450391_a_at 1453836_a_at	16281	-0.325	-0.3959	No
74	NFKB1	1427705_a_at 1442949_at	16839	-0.453	-0.4182	No
75	CD40	1439221_s_at 1449473_s_at 1460415_a_at	16848	-0.457	-0.4153	No
76	SIGIRR	1449163_at	16868	-0.462	-0.4129	No
77	CDO1	1448842_at	16927	-0.476	-0.4122	No
78	CCR3	1422957_at	17019	-0.499	-0.4128	No
79	CD40LG	1422283_at	17262	-0.570	-0.4198	No
80	CXCL10	1418930_at	17296	-0.580	-0.4172	No
81	CXCL9	1418652_at 1456907_at	17549	-0.659	-0.4241	No
82	AIF1	1418204_s_at	17668	-0.693	-0.4246	No
83	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	18298	-0.913	-0.4470	No
84	PRDX5	1416381_a_at	18318	-0.918	-0.4413	No
85	CYBB	1422978_at 1436778_at 1436779_at	18699	-1.038	-0.4514	No
86	CCR4	1421655_a_at	18874	-1.109	-0.4515	Yes
87	IRAK2	1436507_at	18879	-1.112	-0.4438	Yes
88	RAC1	1423734_at 1437674_at 1451086_s_at	19167	-1.249	-0.4481	Yes
89	GPR68	1455000_at	19331	-1.339	-0.4460	Yes
90	ANXA1	1448213_at	19616	-1.511	-0.4483	Yes
91	NFE2L1	1416331_a_at	19894	-1.715	-0.4489	Yes
92	CXCR4	1448710_at	19996	-1.803	-0.4407	Yes
93	HDAC4	1436758_at 1447566_at 1454693_at	20114	-1.896	-0.4326	Yes
94	RELA	1419536_a_at	20278	-2.013	-0.4258	Yes
95	LY75	1449328_at	20468	-2.172	-0.4191	Yes
96	ALOX15	1420338_at	20542	-2.258	-0.4064	Yes
97	CD97	1418394_a_at	20547	-2.260	-0.3906	Yes
98	NMI	1425719_a_at	20625	-2.363	-0.3773	Yes
99	CCL22	1417925_at	20749	-2.506	-0.3652	Yes
100	NFRKB	1434753_at 1445551_at	20817	-2.610	-0.3498	Yes
101	PARP4	1441026_at	21041	-2.979	-0.3388	Yes
102	TNFRSF1A	1417291_at	21202	-3.374	-0.3222	Yes
103	FOS	1423100_at	21307	-3.658	-0.3011	Yes
104	HDAC5	1415743_at	21541	-4.626	-0.2789	Yes
105	HDAC7A	1420812_at 1420813_at	21637	-5.344	-0.2454	Yes
106	NFATC3	1419976_s_at 1452497_a_at	21694	-5.798	-0.2069	Yes
107	TGFB1	1420653_at 1445360_at	21716	-6.029	-0.1651	Yes
108	S100A9	1448756_at	21916	-8.114	-0.1166	Yes
109	CCR7	1423466_at	21917	-8.151	-0.0588	Yes
110	S100A8	1419394_s_at	21930	-8.411	0.0003	Yes