Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
| Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | GOLGI_VESICLE_TRANSPORT |
| Enrichment Score (ES) | -0.5845913 |
| Normalized Enrichment Score (NES) | -1.8291161 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.22885557 |
| FWER p-Value | 0.599 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | COPZ1 | 1447834_at 1451825_a_at | 1377 | 2.072 | -0.0294 | No | ||
| 2 | ERGIC2 | 1424462_at 1443180_at 1447011_at 1451360_at 1453796_a_at | 1907 | 1.779 | -0.0247 | No | ||
| 3 | STX18 | 1425011_x_at 1429288_x_at 1431295_a_at 1435102_a_at 1453819_x_at | 2070 | 1.686 | -0.0049 | No | ||
| 4 | COG7 | 1443486_at | 3621 | 1.161 | -0.0569 | No | ||
| 5 | SNAP23 | 1420896_at 1420897_at 1420898_at | 6225 | 0.801 | -0.1628 | No | ||
| 6 | BET1 | 1416866_at 1416867_at | 6266 | 0.797 | -0.1518 | No | ||
| 7 | DOPEY1 | 1435295_at 1442855_at | 6846 | 0.728 | -0.1664 | No | ||
| 8 | TMED10 | 1424707_at 1424708_at | 7202 | 0.688 | -0.1715 | No | ||
| 9 | ZW10 | 1424891_a_at 1431747_at 1445206_at | 7763 | 0.624 | -0.1870 | No | ||
| 10 | COPG2 | 1448761_a_at | 10304 | 0.374 | -0.2970 | No | ||
| 11 | AP3B2 | 1426927_at 1445224_at 1451837_at | 10801 | 0.325 | -0.3144 | No | ||
| 12 | LMAN2L | 1435475_at 1441295_at | 11217 | 0.290 | -0.3286 | No | ||
| 13 | NAPG | 1424069_at 1424070_at 1443366_at | 12677 | 0.148 | -0.3929 | No | ||
| 14 | SCAMP3 | 1416294_at | 12961 | 0.120 | -0.4039 | No | ||
| 15 | COPE | 1416384_a_at | 13141 | 0.101 | -0.4104 | No | ||
| 16 | COG2 | 1416932_at | 13240 | 0.089 | -0.4134 | No | ||
| 17 | RAB14 | 1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at | 13597 | 0.049 | -0.4289 | No | ||
| 18 | ERGIC3 | 1423548_s_at 1451017_at 1456745_x_at 1456867_x_at | 13754 | 0.033 | -0.4355 | No | ||
| 19 | RER1 | 1460660_x_at 1460706_s_at | 15748 | -0.226 | -0.5229 | No | ||
| 20 | KIF1C | 1424747_at 1426325_at | 16296 | -0.328 | -0.5426 | No | ||
| 21 | YKT6 | 1448464_at 1460191_at | 16574 | -0.386 | -0.5490 | No | ||
| 22 | SEC22C | 1436102_at 1456091_at | 16597 | -0.391 | -0.5436 | No | ||
| 23 | GBF1 | 1415709_s_at 1415757_at 1432677_at 1438207_at | 16626 | -0.398 | -0.5385 | No | ||
| 24 | SEC22A | 1416320_at 1441696_at 1444802_at 1459408_at | 16928 | -0.477 | -0.5445 | No | ||
| 25 | OPTN | 1429778_at 1435679_at | 16943 | -0.481 | -0.5374 | No | ||
| 26 | DOPEY2 | 1428330_at 1449904_at | 17978 | -0.795 | -0.5717 | Yes | ||
| 27 | COPB2 | 1452102_at 1456175_a_at | 18158 | -0.866 | -0.5659 | Yes | ||
| 28 | SCAMP1 | 1426775_s_at 1453054_at | 18375 | -0.936 | -0.5606 | Yes | ||
| 29 | GOSR1 | 1416215_at 1448256_at | 18441 | -0.963 | -0.5480 | Yes | ||
| 30 | NAPA | 1416192_at 1448243_at | 18521 | -0.987 | -0.5356 | Yes | ||
| 31 | LMAN1 | 1428129_at 1428130_at 1444037_at 1452671_s_at | 18660 | -1.027 | -0.5253 | Yes | ||
| 32 | NRBP1 | 1423864_at 1444600_at | 18750 | -1.058 | -0.5123 | Yes | ||
| 33 | SCAMP2 | 1416611_at 1448404_at | 19016 | -1.176 | -0.5053 | Yes | ||
| 34 | GOSR2 | 1419371_s_at 1419372_at | 19042 | -1.187 | -0.4873 | Yes | ||
| 35 | STEAP2 | 1428636_at 1438773_at 1442359_at 1444290_at 1446071_at | 20261 | -2.005 | -0.5105 | Yes | ||
| 36 | STX16 | 1429237_at | 20686 | -2.424 | -0.4906 | Yes | ||
| 37 | MON2 | 1428817_at 1428818_at | 20727 | -2.483 | -0.4523 | Yes | ||
| 38 | GOLGA5 | 1418447_at | 21062 | -3.034 | -0.4184 | Yes | ||
| 39 | TXNDC1 | 1437143_a_at 1451195_a_at | 21076 | -3.074 | -0.3693 | Yes | ||
| 40 | COPB1 | 1423301_at | 21116 | -3.152 | -0.3201 | Yes | ||
| 41 | EXOC5 | 1436817_at 1438126_at | 21409 | -4.020 | -0.2684 | Yes | ||
| 42 | STX7 | 1418436_at | 21642 | -5.411 | -0.1914 | Yes | ||
| 43 | COG3 | 1434654_at 1456286_at | 21647 | -5.435 | -0.1037 | Yes | ||
| 44 | SEC22B | 1415766_at 1449063_at | 21816 | -7.221 | 0.0055 | Yes |
