Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
| Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | GOLGI_MEMBRANE |
| Enrichment Score (ES) | -0.5659248 |
| Normalized Enrichment Score (NES) | -1.7579361 |
| Nominal p-value | 0.0019569471 |
| FDR q-value | 0.20026112 |
| FWER p-Value | 0.888 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | AP1S1 | 1416087_at | 1178 | 2.228 | -0.0092 | No | ||
| 2 | GOLGB1 | 1433135_at 1435032_at 1460535_at | 2501 | 1.473 | -0.0401 | No | ||
| 3 | LDLRAP1 | 1424378_at 1457162_at | 2991 | 1.315 | -0.0361 | No | ||
| 4 | CSPG5 | 1450713_at | 3836 | 1.123 | -0.0522 | No | ||
| 5 | MAN1C1 | 1436193_at | 4041 | 1.088 | -0.0397 | No | ||
| 6 | ATP2C1 | 1431196_at 1434386_at 1437738_at 1439215_at 1442742_at | 4819 | 0.987 | -0.0555 | No | ||
| 7 | BET1 | 1416866_at 1416867_at | 6266 | 0.797 | -0.1056 | No | ||
| 8 | DOPEY1 | 1435295_at 1442855_at | 6846 | 0.728 | -0.1174 | No | ||
| 9 | CLN3 | 1417551_at 1457789_at | 7494 | 0.651 | -0.1339 | No | ||
| 10 | FIS1 | 1416764_at 1443819_x_at | 7866 | 0.614 | -0.1386 | No | ||
| 11 | BNIP3 | 1422470_at | 11032 | 0.306 | -0.2770 | No | ||
| 12 | PAMCI | 1427942_at | 11728 | 0.236 | -0.3040 | No | ||
| 13 | GNAS | 1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at | 11745 | 0.234 | -0.3001 | No | ||
| 14 | TAPBP | 1421812_at 1450378_at | 12460 | 0.167 | -0.3293 | No | ||
| 15 | COG2 | 1416932_at | 13240 | 0.089 | -0.3631 | No | ||
| 16 | CAV1 | 1449145_a_at | 13411 | 0.070 | -0.3695 | No | ||
| 17 | MALL | 1425359_at 1435693_at | 13642 | 0.045 | -0.3791 | No | ||
| 18 | PCSK7 | 1417180_at | 14789 | -0.090 | -0.4296 | No | ||
| 19 | RER1 | 1460660_x_at 1460706_s_at | 15748 | -0.226 | -0.4688 | No | ||
| 20 | AP1GBP1 | 1435215_at 1442344_at 1457695_at | 15891 | -0.252 | -0.4703 | No | ||
| 21 | AP1G2 | 1419113_at | 16047 | -0.281 | -0.4717 | No | ||
| 22 | GOLGA3 | 1419159_at 1419160_at 1449616_s_at | 16495 | -0.368 | -0.4848 | No | ||
| 23 | LARGE | 1417435_at 1417436_at 1441642_at 1442420_at 1443212_at 1458663_at | 16540 | -0.379 | -0.4792 | No | ||
| 24 | TRIM23 | 1426969_at 1429998_at 1456089_at | 16651 | -0.406 | -0.4761 | No | ||
| 25 | DOPEY2 | 1428330_at 1449904_at | 17978 | -0.795 | -0.5208 | No | ||
| 26 | ENTPD4 | 1431761_at 1438177_x_at 1447900_x_at 1449190_a_at | 18325 | -0.920 | -0.5181 | No | ||
| 27 | RHOT1 | 1423533_a_at 1440853_at | 18559 | -0.996 | -0.5088 | No | ||
| 28 | LMAN1 | 1428129_at 1428130_at 1444037_at 1452671_s_at | 18660 | -1.027 | -0.4929 | No | ||
| 29 | STEAP2 | 1428636_at 1438773_at 1442359_at 1444290_at 1446071_at | 20261 | -2.005 | -0.5258 | Yes | ||
| 30 | RHOT2 | 1426822_at | 20972 | -2.853 | -0.5011 | Yes | ||
| 31 | VAMP4 | 1422895_at 1422896_at 1434796_at | 21079 | -3.077 | -0.4444 | Yes | ||
| 32 | COPB1 | 1423301_at | 21116 | -3.152 | -0.3830 | Yes | ||
| 33 | ARFIP1 | 1454916_s_at | 21151 | -3.228 | -0.3199 | Yes | ||
| 34 | GLG1 | 1417087_at 1448579_at 1448580_at 1460554_s_at | 21232 | -3.443 | -0.2547 | Yes | ||
| 35 | ATP7A | 1418774_a_at 1436921_at | 21244 | -3.480 | -0.1855 | Yes | ||
| 36 | MAP4K2 | 1428297_at 1434833_at 1450244_a_at | 21516 | -4.429 | -0.1093 | Yes | ||
| 37 | ICA1 | 1417901_a_at 1431644_a_at | 21751 | -6.417 | 0.0084 | Yes |
