Details for gene set V$RORA2

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$RORA2_01
Enrichment Score (ES)	-0.41802633
Normalized Enrichment Score (NES)	-1.5384014
Nominal p-value	0.01058201
FDR q-value	0.120168746
FWER p-Value	0.849

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	APEX2	1424322_at 1425954_a_at	384	3.763	0.0116	No
2	CTH	1426243_at	737	2.869	0.0176	No
3	LRRC20	1438422_at	1231	2.187	0.0120	No
4	KCTD15	1435339_at	1802	1.845	0.0002	No
5	HOXB2	1444204_at 1449397_at	1854	1.808	0.0118	No
6	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	1919	1.772	0.0226	No
7	COX4I2	1421373_at	2130	1.654	0.0258	No
8	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	2336	1.549	0.0284	No
9	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	2544	1.455	0.0302	No
10	RYR1	1427306_at 1457347_at	2826	1.360	0.0279	No
11	CITED1	1449031_at	3704	1.147	-0.0034	No
12	MMP14	1416572_at 1448383_at	3795	1.132	0.0012	No
13	CSMD3	1438272_at 1438572_at 1454245_at	3884	1.115	0.0058	No
14	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	4532	1.018	-0.0159	No
15	HDAC9	1421306_a_at 1434572_at	4559	1.014	-0.0093	No
16	CACNA1A	1430408_at 1444455_at 1450510_a_at 1458312_at 1459996_at	4618	1.009	-0.0041	No
17	GRIA1	1435239_at 1448972_at 1458285_at	5021	0.963	-0.0151	No
18	TREX2	1449367_at	5642	0.877	-0.0367	No
19	SLC4A7	1455876_at 1457528_at	5743	0.862	-0.0346	No
20	MPP2	1449173_at	6209	0.803	-0.0497	No
21	TMEFF2	1419073_at 1441598_at	6349	0.787	-0.0500	No
22	SHH	1427571_at 1436869_at	6447	0.774	-0.0484	No
23	PPP1R3A	1422108_at	7047	0.705	-0.0704	No
24	ARF5	1422807_at	7328	0.671	-0.0780	No
25	ASPH	1420959_at 1425274_at 1425275_at 1426015_s_at 1436455_at 1450058_at	8073	0.591	-0.1075	No
26	UBE2L3	1417907_at 1417908_s_at 1448879_at 1448880_at	8198	0.580	-0.1087	No
27	OPN1SW	1418552_at 1449132_at	8230	0.577	-0.1057	No
28	CHRDL1	1421295_at 1424945_at 1434201_at 1456722_at	8233	0.577	-0.1013	No
29	HPCA	1425833_a_at 1450930_at	8343	0.566	-0.1019	No
30	LMO1	1418478_at	8347	0.566	-0.0977	No
31	MYLK	1425504_at 1425505_at 1425506_at	8626	0.537	-0.1062	No
32	CLOCK	1418659_at 1435775_at 1439314_at	8817	0.519	-0.1109	No
33	SSX2IP	1417514_at 1420185_at 1448743_at 1449764_x_at	8829	0.518	-0.1074	No
34	NRL	1450946_at	9121	0.487	-0.1170	No
35	SP6	1427786_at 1427787_at 1437788_at 1442342_at	9286	0.473	-0.1208	No
36	NUBP2	1416512_at 1459842_x_at	9902	0.412	-0.1458	No
37	PITX2	1424797_a_at 1450482_a_at	9912	0.411	-0.1430	No
38	ABAT	1433855_at	9914	0.411	-0.1399	No
39	B3GALT2	1423084_at 1437433_at 1437644_at	10481	0.357	-0.1631	No
40	EPHA3	1425574_at 1425575_at 1426057_a_at 1443273_at	10589	0.346	-0.1653	No
41	ESRRB	1422986_at 1436926_at 1441921_x_at	10646	0.341	-0.1652	No
42	ABCA1	1421839_at 1421840_at 1450392_at	10652	0.341	-0.1628	No
43	SEMA3A	1420416_at 1420417_at 1449865_at	10699	0.336	-0.1623	No
44	TMPRSS3	1421714_at	10955	0.312	-0.1716	No
45	DTNA	1419223_a_at 1425292_at 1426066_a_at 1427588_a_at 1429768_at 1447280_at 1456069_at 1458908_at	11539	0.256	-0.1963	No
46	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	11670	0.242	-0.2004	No
47	ZDHHC21	1429488_at	11717	0.238	-0.2007	No
48	TTYH1	1422694_at 1422696_at 1426617_a_at	11757	0.232	-0.2006	No
49	C1QTNF3	1422606_at	12113	0.199	-0.2154	No
50	RALGPS2	1417230_at 1428789_at 1431704_a_at	12143	0.196	-0.2152	No
51	ZADH2	1451277_at	12229	0.189	-0.2176	No
52	CNTN6	1422649_at	12549	0.159	-0.2310	No
53	C1QTNF4	1417050_at 1441648_at	13084	0.107	-0.2546	No
54	NPAS2	1421036_at 1421037_at	13130	0.102	-0.2559	No
55	ATP5H	1423676_at 1435112_a_at	13568	0.052	-0.2755	No
56	ADCYAP1	1423427_at 1441778_at	13995	0.008	-0.2950	No
57	KCNAB3	1421790_a_at 1423950_at	14016	0.005	-0.2958	No
58	DAB2	1420498_a_at 1423805_at 1429693_at 1430604_a_at	14520	-0.056	-0.3185	No
59	LRRN5	1433469_at	14698	-0.079	-0.3260	No
60	HNT	1426282_at 1426283_at 1458492_x_at	14702	-0.079	-0.3255	No
61	SLA	1420818_at 1420819_at 1441761_at 1447813_x_at	14873	-0.100	-0.3325	No
62	TAF5L	1448195_at	15087	-0.129	-0.3413	No
63	CDYL	1418070_at 1418071_s_at 1448935_at	15448	-0.183	-0.3563	No
64	GABRB2	1450319_at	15670	-0.214	-0.3648	No
65	PYGM	1448602_at	15834	-0.240	-0.3704	No
66	IBRDC2	1425282_at 1439153_at 1443252_at 1456834_at	16015	-0.274	-0.3765	No
67	AP1G2	1419113_at	16047	-0.281	-0.3758	No
68	AP3D1	1417964_at 1445280_at	16453	-0.359	-0.3915	No
69	EPHA7	1427528_a_at 1443485_at 1445635_at 1451991_at 1452380_at	16772	-0.438	-0.4027	No
70	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	16806	-0.445	-0.4008	No
71	CAMKK2	1424474_a_at 1424475_at 1424476_at 1455401_at	17025	-0.500	-0.4069	No
72	NMT2	1423581_at 1440433_at 1444387_at 1457107_at	17269	-0.572	-0.4136	Yes
73	GAS2	1429147_at 1435834_at 1438564_at 1450112_a_at	17276	-0.573	-0.4094	Yes
74	LNX2	1460249_at	17284	-0.575	-0.4053	Yes
75	KLF4	1417394_at 1417395_at	17293	-0.578	-0.4012	Yes
76	IVNS1ABP	1420961_a_at 1425718_a_at 1450084_s_at	17445	-0.621	-0.4033	Yes
77	RG9MTD2	1427375_at 1435035_at 1447781_s_at	17478	-0.632	-0.3999	Yes
78	SH3GL2	1418791_at 1418792_at 1449228_at	17528	-0.654	-0.3971	Yes
79	KHDRBS2	1422117_s_at 1445110_at	17976	-0.795	-0.4114	Yes
80	ATP1B2	1422009_at 1435148_at	18018	-0.812	-0.4070	Yes
81	TLE4	1425650_at 1430384_at 1450853_at	18056	-0.832	-0.4022	Yes
82	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	18083	-0.838	-0.3969	Yes
83	KIAA1443	1434636_at	18256	-0.899	-0.3979	Yes
84	SYNE1	1421545_a_at 1455225_at 1455493_at	18443	-0.963	-0.3989	Yes
85	TRIM29	1424162_at	18463	-0.968	-0.3923	Yes
86	ANGPT1	1421441_at 1438936_s_at 1438937_x_at 1439066_at 1446656_at 1450717_at 1457381_at	18530	-0.991	-0.3876	Yes
87	INPP5A	1433605_at 1446114_at	18646	-1.023	-0.3850	Yes
88	ACSL3	1428386_at 1428387_at 1452771_s_at	18745	-1.055	-0.3813	Yes
89	CIRBP	1416332_at	18829	-1.090	-0.3767	Yes
90	HTATIP	1433980_at 1433981_s_at	19053	-1.191	-0.3777	Yes
91	PBXIP1	1451132_at	19275	-1.304	-0.3777	Yes
92	MARCKS	1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at	19290	-1.314	-0.3682	Yes
93	SLC18A2	1437079_at	19475	-1.425	-0.3656	Yes
94	EIF5A	1437859_x_at 1451470_s_at	19803	-1.648	-0.3678	Yes
95	GALT	1450187_a_at	20432	-2.136	-0.3800	Yes
96	MYB	1421317_x_at 1422734_a_at 1450194_a_at	20588	-2.317	-0.3692	Yes
97	PIM1	1423006_at 1435458_at	20778	-2.545	-0.3581	Yes
98	RCOR1	1434336_s_at 1437545_at 1454932_at	20828	-2.619	-0.3401	Yes
99	MGEA5	1422900_at 1422901_at 1422902_s_at 1433654_at 1439081_at	21049	-2.990	-0.3270	Yes
100	ZFP36L1	1422528_a_at 1450644_at	21283	-3.593	-0.3099	Yes
101	UBE2R2	1415768_a_at 1443742_x_at 1444460_at	21292	-3.617	-0.2822	Yes
102	DBP	1418174_at 1438211_s_at	21322	-3.702	-0.2549	Yes
103	JMJD1B	1428320_at 1438508_at 1458417_at	21480	-4.281	-0.2289	Yes
104	PPP2CA	1417367_at 1444875_at 1456390_at	21548	-4.655	-0.1959	Yes
105	ARNTL	1425099_a_at 1446544_at 1457740_at	21561	-4.763	-0.1596	Yes
106	REST	1425564_at 1425565_at 1428227_at	21784	-6.888	-0.1164	Yes
107	MLL3	1427150_at 1434178_at 1434179_at 1457193_at	21897	-7.909	-0.0603	Yes
108	ATP8B2	1434026_at 1441699_at 1452450_at	21910	-8.016	0.0012	Yes