Details for gene set V$NFKB_Q6

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$NFKB_Q6_01
Enrichment Score (ES)	-0.48276538
Normalized Enrichment Score (NES)	-1.8874469
Nominal p-value	0.0
FDR q-value	0.0132618295
FWER p-Value	0.019

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL27A1	1429549_at 1453191_at	890	2.611	-0.0289	No
2	NR2F2	1416158_at 1416159_at 1416160_at 1431237_at 1444229_at	1441	2.030	-0.0448	No
3	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	1528	1.990	-0.0396	No
4	GRIN2D	1421393_at	1635	1.935	-0.0355	No
5	NFKBIB	1421266_s_at 1446718_at	1654	1.924	-0.0275	No
6	UACA	1452985_at	1710	1.894	-0.0213	No
7	ARHGAP8	1451463_at	1789	1.851	-0.0164	No
8	TCEA2	1418107_at 1440791_x_at	1796	1.848	-0.0082	No
9	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2241	1.602	-0.0212	No
10	SOCS2	1418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at	2336	1.549	-0.0184	No
11	TRIM47	1426784_at	2449	1.500	-0.0166	No
12	SMPD3	1422779_at 1438665_at 1445759_at 1450748_at	2457	1.497	-0.0100	No
13	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	2544	1.455	-0.0073	No
14	CSF3	1419427_at	2696	1.403	-0.0078	No
15	HSD3B7	1416968_a_at 1442912_at	2912	1.335	-0.0115	No
16	FUT7	1420756_at	3127	1.274	-0.0155	No
17	WNT10A	1460657_at	3238	1.245	-0.0148	No
18	IL12A	1425454_a_at	3348	1.222	-0.0142	No
19	TP53	1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at	3417	1.208	-0.0117	No
20	SLC6A12	1449382_at	3751	1.140	-0.0218	No
21	GATA4	1418863_at 1418864_at 1441364_at	3811	1.128	-0.0193	No
22	POU2F3	1450507_at	3853	1.119	-0.0160	No
23	ASCL3	1420780_at	4095	1.078	-0.0222	No
24	ALG6	1439007_at 1459337_at	4269	1.051	-0.0253	No
25	JAK3	1425750_a_at 1446515_at	4514	1.019	-0.0318	No
26	CLCN1	1427591_at 1448082_at	4703	1.000	-0.0358	No
27	TRIB2	1426640_s_at 1426641_at 1459852_x_at	4714	0.999	-0.0317	No
28	TNFRSF1B	1418099_at 1448951_at	4962	0.971	-0.0386	No
29	BCL6B	1418421_at	5065	0.956	-0.0388	No
30	DDR1	1415797_at 1415798_at 1435820_x_at 1437619_x_at 1438367_x_at 1439382_x_at 1456226_x_at 1459990_at	5072	0.955	-0.0347	No
31	MMP9	1416298_at 1448291_at	5171	0.941	-0.0349	No
32	BAI2	1435558_at	5492	0.896	-0.0455	No
33	UBE2D3	1423112_at 1423113_a_at 1423114_at 1450858_a_at 1450859_s_at 1455479_a_at 1455480_s_at	5559	0.888	-0.0444	No
34	PTGES	1439747_at 1449449_at 1449450_at	5582	0.885	-0.0413	No
35	RALGDS	1460634_at	5603	0.882	-0.0382	No
36	TBX20	1422219_a_at 1425158_at 1453351_at	5927	0.840	-0.0492	No
37	VCAM1	1415989_at 1436003_at 1448162_at 1451314_a_at	5935	0.839	-0.0456	No
38	CENTB5	1439021_at	6584	0.758	-0.0719	No
39	SEC61A1	1416189_a_at 1416190_a_at 1416191_at 1434986_a_at 1448242_at 1455987_at	6613	0.755	-0.0697	No
40	CNTNAP1	1421580_at	6646	0.751	-0.0677	No
41	HTR3B	1421652_at	7148	0.694	-0.0876	No
42	RND1	1455197_at	7184	0.690	-0.0860	No
43	KLK9	1431681_at	7667	0.634	-0.1052	No
44	EGF	1418093_a_at	8159	0.584	-0.1251	No
45	SHOX2	1420559_a_at 1438042_at	8226	0.578	-0.1255	No
46	GREM1	1425357_a_at	8336	0.567	-0.1278	No
47	BLR1	1422003_at	8396	0.560	-0.1280	No
48	DGKI	1439986_at 1442813_at	8709	0.529	-0.1399	No
49	NTN1	1422987_at 1454974_at	8752	0.524	-0.1394	No
50	C1QL1	1422777_at	8780	0.522	-0.1382	No
51	GNG4	1417943_at 1417944_at 1447669_s_at	9082	0.491	-0.1498	No
52	IL23A	1419529_at	9109	0.489	-0.1487	No
53	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	9217	0.478	-0.1515	No
54	EDN2	1449161_at	9280	0.473	-0.1521	No
55	SP6	1427786_at 1427787_at 1437788_at 1442342_at	9286	0.473	-0.1502	No
56	ETV1	1422607_at 1445314_at 1450684_at	9512	0.450	-0.1585	No
57	AMOTL1	1428785_at 1431121_at 1446909_at 1455247_at	10023	0.399	-0.1800	No
58	IL13	1420802_at	10032	0.398	-0.1786	No
59	ERN1	1421240_at 1431886_at 1437119_at 1438583_at 1438997_at 1450176_at	10149	0.388	-0.1821	No
60	IL7	1422080_at 1436861_at	10155	0.388	-0.1806	No
61	DCAMKL1	1423125_at 1424270_at 1424271_at 1436659_at 1446190_at 1450863_a_at 1451289_at 1451917_a_at	10270	0.377	-0.1841	No
62	GPHN	1426462_at 1426463_at 1430038_at 1444869_at 1445188_at 1458242_at	10290	0.375	-0.1832	No
63	DUSP22	1441723_at 1448985_at	10451	0.360	-0.1889	No
64	TSLP	1450004_at	10778	0.327	-0.2024	No
65	TCF1	1421234_at	10910	0.315	-0.2070	No
66	ZIC4	1421539_at 1456417_at	11070	0.302	-0.2129	No
67	IL2RA	1420691_at 1420692_at	11271	0.284	-0.2207	No
68	PAPPA	1427633_a_at 1432591_at 1432592_at 1459375_at	11291	0.282	-0.2203	No
69	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	11358	0.274	-0.2221	No
70	MAML2	1446570_at 1447546_s_at	11528	0.257	-0.2287	No
71	NR3C1	1421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at	11557	0.254	-0.2288	No
72	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	11670	0.242	-0.2328	No
73	ICAM1	1424067_at	12150	0.196	-0.2539	No
74	RASGRP4	1425380_at	12250	0.187	-0.2576	No
75	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	12518	0.163	-0.2691	No
76	MAG	1460219_at	12566	0.158	-0.2706	No
77	IER5	1417612_at 1417613_at	12648	0.150	-0.2736	No
78	KRTAP13-1	1428007_at	12995	0.116	-0.2890	No
79	MSC	1418417_at	13374	0.073	-0.3060	No
80	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	13400	0.071	-0.3068	No
81	PCSK2	1428305_at 1444147_at 1447991_at 1447992_s_at 1448312_at	13840	0.023	-0.3269	No
82	REV3L	1424632_a_at 1426194_x_at 1451960_a_at	13927	0.015	-0.3307	No
83	TNFSF7	1449926_at	13994	0.008	-0.3337	No
84	CCL5	1418126_at	14078	-0.001	-0.3376	No
85	NFKB2	1425902_a_at 1429128_x_at	14195	-0.015	-0.3428	No
86	MOBKL2C	1440919_at 1459919_a_at	14335	-0.031	-0.3491	No
87	BDNF	1422168_a_at 1422169_a_at	14499	-0.053	-0.3563	No
88	IFNB1	1422305_at	14651	-0.072	-0.3629	No
89	PTHLH	1422324_a_at 1427527_a_at	14715	-0.081	-0.3654	No
90	SNAP25	1416828_at 1443398_at	14921	-0.106	-0.3744	No
91	RIN2	1426368_at 1441209_at 1442829_at	15050	-0.124	-0.3797	No
92	GRK5	1446361_at 1446998_at 1449514_at	15166	-0.138	-0.3843	No
93	FGF1	1423136_at 1441042_at 1450869_at	15345	-0.166	-0.3917	No
94	RBPSUH	1418114_at 1438848_at 1446436_at 1448957_at 1454896_at	15371	-0.169	-0.3921	No
95	GADD45B	1420197_at 1449773_s_at 1450971_at	15729	-0.221	-0.4075	No
96	BATF	1419410_at	16060	-0.283	-0.4213	No
97	ENO3	1417951_at 1449631_at	16259	-0.322	-0.4290	No
98	FGF17	1421523_at 1456239_at	16350	-0.338	-0.4315	No
99	CYLD	1429617_at 1429618_at 1445213_at	16421	-0.352	-0.4331	No
100	PPP1R13B	1434895_s_at 1442956_at 1459224_at	16622	-0.396	-0.4405	No
101	MADCAM1	1425253_a_at	16704	-0.422	-0.4423	No
102	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	16806	-0.445	-0.4449	No
103	MRPS6	1424440_at 1447585_s_at	16896	-0.469	-0.4468	No
104	IL1RN	1423017_a_at 1425663_at 1451798_at	16987	-0.493	-0.4487	No
105	ZNRF1	1420949_at 1420950_at 1424384_a_at	17084	-0.518	-0.4507	No
106	EDG5	1428176_at 1447880_x_at	17150	-0.532	-0.4512	No
107	NEK8	1450337_a_at 1458157_at	17235	-0.560	-0.4525	No
108	MSX1	1417127_at 1448601_s_at	17320	-0.585	-0.4537	No
109	ILK	1449942_a_at	17410	-0.609	-0.4550	No
110	PHOX2B	1422232_at 1455907_x_at	17579	-0.667	-0.4596	No
111	RAP2C	1428119_a_at 1437016_x_at 1460430_at	17704	-0.701	-0.4621	No
112	PRKCD	1422847_a_at 1442256_at	17719	-0.705	-0.4595	No
113	ASH1L	1420985_at 1441117_at 1450071_at 1450072_at	18108	-0.846	-0.4734	No
114	IL27RA	1449508_at	18313	-0.917	-0.4785	Yes
115	XPO6	1422759_a_at 1440492_at 1443737_at	18360	-0.931	-0.4764	Yes
116	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	18390	-0.942	-0.4734	Yes
117	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	18594	-1.004	-0.4781	Yes
118	ATP1B1	1418453_a_at 1423890_x_at 1439036_a_at 1451152_a_at 1455949_at	18628	-1.017	-0.4749	Yes
119	DAP3	1450848_at	18642	-1.022	-0.4708	Yes
120	ELMO1	1424523_at 1446610_at 1450208_a_at	18664	-1.028	-0.4670	Yes
121	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18671	-1.030	-0.4626	Yes
122	SLAMF8	1425294_at	18692	-1.035	-0.4587	Yes
123	BMF	1422995_at 1454880_s_at 1458325_x_at	18712	-1.042	-0.4548	Yes
124	PFN1	1449018_at	18777	-1.069	-0.4528	Yes
125	CHD4	1436343_at 1438476_a_at 1451295_a_at	18887	-1.114	-0.4527	Yes
126	TGIF	1422286_a_at	18917	-1.127	-0.4488	Yes
127	EBI3	1449222_at	18973	-1.159	-0.4460	Yes
128	USP52	1426700_a_at	19020	-1.177	-0.4427	Yes
129	RHOG	1422572_at	19084	-1.203	-0.4401	Yes
130	RASSF2	1428392_at 1444889_at	19124	-1.229	-0.4362	Yes
131	UNC84B	1433832_at 1439238_at	19257	-1.296	-0.4363	Yes
132	UPF2	1435030_at 1445777_at	19318	-1.332	-0.4329	Yes
133	MITF	1422025_at 1455214_at	19431	-1.397	-0.4317	Yes
134	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	19454	-1.411	-0.4262	Yes
135	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	19463	-1.418	-0.4200	Yes
136	PTPRJ	1425587_a_at 1425588_at 1427602_at 1427629_at 1443683_at 1455030_at	19678	-1.558	-0.4227	Yes
137	TRAF4	1416571_at 1460642_at	19698	-1.571	-0.4163	Yes
138	UBD	1419762_at	19758	-1.616	-0.4116	Yes
139	MAP3K11	1450669_at	19775	-1.630	-0.4048	Yes
140	SIRT2	1423507_a_at	19790	-1.641	-0.3979	Yes
141	EIF5A	1437859_x_at 1451470_s_at	19803	-1.648	-0.3909	Yes
142	STAT6	1421708_a_at 1426353_at	19854	-1.685	-0.3854	Yes
143	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19917	-1.734	-0.3803	Yes
144	DUSP6	1415834_at	20035	-1.829	-0.3772	Yes
145	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	20139	-1.923	-0.3731	Yes
146	CHD6	1427384_at 1431047_at	20259	-2.004	-0.3694	Yes
147	GNB1	1417432_a_at 1425908_at 1454696_at 1459442_at	20284	-2.017	-0.3612	Yes
148	IL4I1	1419192_at	20344	-2.050	-0.3544	Yes
149	ACTN1	1427385_s_at 1428585_at 1452415_at	20628	-2.369	-0.3565	Yes
150	LTB	1419135_at	20678	-2.419	-0.3477	Yes
151	ZBTB9	1429125_at	20682	-2.423	-0.3366	Yes
152	NDRG2	1448154_at	20751	-2.507	-0.3282	Yes
153	RFX5	1423103_at	20991	-2.890	-0.3259	Yes
154	LTA	1420353_at	21087	-3.107	-0.3160	Yes
155	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	21165	-3.289	-0.3044	Yes
156	BMP2K	1421103_at 1437419_at 1458370_at	21259	-3.523	-0.2924	Yes
157	ZBTB11	1454826_at	21318	-3.690	-0.2781	Yes
158	HIVEP1	1422742_at	21365	-3.861	-0.2624	Yes
159	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21403	-3.996	-0.2457	Yes
160	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	21443	-4.151	-0.2284	Yes
161	EP300	1434765_at	21465	-4.220	-0.2100	Yes
162	MAP4K2	1428297_at 1434833_at 1450244_a_at	21516	-4.429	-0.1919	Yes
163	BCL3	1418133_at	21555	-4.716	-0.1719	Yes
164	TNIP1	1427689_a_at	21563	-4.786	-0.1502	Yes
165	CD69	1428735_at	21570	-4.845	-0.1282	Yes
166	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	21575	-4.900	-0.1058	Yes
167	RELB	1417856_at	21596	-5.083	-0.0833	Yes
168	FBXL12	1448420_a_at	21758	-6.452	-0.0610	Yes
169	SMOC1	1448321_at	21802	-7.073	-0.0304	Yes
170	BIRC3	1421392_a_at 1425223_at	21905	-7.942	0.0014	Yes