DatasetSet_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls
#SCID_versus_ATM_plus_repos
Phenotypephenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in classSCID
GeneSetV$MYC_Q2
Enrichment Score (ES)0.35199848
Normalized Enrichment Score (NES)1.398347
Nominal p-value0.023419203
FDR q-value0.14404917
FWER p-Value0.991
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$MYC_Q2   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1EBNA1BP21428315_at 1437512_x_at 1439898_at 1457668_x_at148.0470.0462Yes
2HNRPA11423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at267.8870.0917Yes
3ADK1416319_at 1421767_at 1438292_x_at 1442615_at 1445402_at 1446068_at 1446675_at 1456960_at 1459645_at1355.5010.1188Yes
4TIMM101417499_at3233.9740.1333Yes
5NUDC1419471_a_at4333.6130.1494Yes
6EIF4B1426378_at 1426379_at 1426380_at5233.3660.1649Yes
7ATAD3A1422461_at 1437343_x_at 1438178_x_at 1456541_x_at5473.3040.1831Yes
8POLR2L1428296_at5623.2690.2015Yes
9LDHA1419737_a_at5843.2150.2193Yes
10RCOR21417302_at6273.1220.2356Yes
11LTBR1416435_at8012.7550.2437Yes
12TAGLN21426529_a_at9042.5850.2541Yes
13WEE11416773_at 1416774_at9732.4810.2654Yes
14NRIP31418104_at 1431597_a_at 1448954_at12232.1920.2667Yes
15TAF6L1452600_at12422.1730.2786Yes
16ATP5F11426742_at 1433562_s_at15241.9920.2773Yes
17COPS7A1423245_at 1429078_a_at15681.9710.2868Yes
18ARL31450706_a_at16031.9500.2966Yes
19USP151436891_at 1446186_at 1454036_a_at 1455842_x_at16931.9050.3036Yes
20KRTCAP21417058_a_at 1417059_at17581.8700.3116Yes
21PPRC11426381_at18291.8240.3190Yes
22CTSF1449794_x_at 1451019_at19141.7760.3255Yes
23TIAL11421148_a_at 1426352_s_at 1446713_at 1452821_at 1455675_a_at 1455676_x_at19281.7690.3352Yes
24NKX2-31425827_at 1427741_x_at 1452528_a_at21991.6190.3323Yes
25AK21448450_at 1448451_at22541.5920.3390Yes
26POU3F11422068_at 1460038_at22741.5820.3474Yes
27SLC16A11415802_at 1446274_at25111.4700.3451Yes
28FOXD31422210_at25471.4540.3520Yes
29FOSL11417487_at 1417488_at28721.3480.3450No
30COL2A11450567_a_at32441.2440.3352No
31FKBP111417267_s_at 1425839_at 1425938_a_at35861.1690.3264No
32ATP6V0B1416769_s_at 1425448_x_at 1437013_x_at36111.1630.3321No
33SFXN21439966_x_at 1440786_x_at36141.1630.3388No
34PTPRF1420841_at 1420842_at 1420843_at38351.1240.3352No
35STMN11415849_s_at40371.0880.3323No
36PSEN21425869_a_at 1431542_at41411.0720.3339No
37RAB3IL11419991_at 1419992_x_at 1419993_at 1425133_s_at 1428391_at 1456442_at42201.0590.3364No
38RUSC11431137_at 1434743_x_at 1436014_a_at 1437991_x_at 1438017_at44521.0260.3318No
39SYT61420188_at 1426106_a_at 1449766_at 1449767_x_at44671.0240.3371No
40TGFB21423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at46091.0090.3366No
41CNNM11420354_at 1441312_at 1445979_at47280.9980.3370No
42ALX41421737_at47310.9970.3427No
43FGF61427582_at49490.9730.3384No
44PITX31449917_at49510.9720.3440No
45PFDN21421950_at52000.9370.3381No
46HMGN21433507_a_at53450.9170.3368No
47CTBP21422887_a_at 1439823_at54760.8980.3361No
48FADS31418773_at 1435910_at 1449219_at56890.8720.3315No
49LMX1A1421554_at57130.8670.3355No
50IPO131433464_at57440.8620.3391No
51FABP31416023_at 1444844_at60090.8310.3318No
52CENTB51439021_at65840.7580.3099No
53RTN4RL21439573_at66610.7500.3108No
54UBXD31426007_a_at 1451906_at 1456385_x_at 1457581_at66710.7480.3148No
55RHEBL11447818_x_at 1451516_at69300.7180.3071No
56CFL11448346_at 1455138_x_at75770.6440.2812No
57SIRT11418640_at 1458538_at77720.6230.2760No
58HPCA1425833_a_at 1450930_at83430.5660.2531No
59APOA51417610_at83710.5630.2552No
60AGMAT1427214_at84260.5570.2559No
61SLC1A71456971_at85340.5460.2542No
62FCHSD21434260_at 1456949_at86900.5310.2502No
63TESK21426546_at88930.5120.2439No
64TFB2M1423441_at91550.4840.2348No
65BHLHB31421099_at93370.4670.2292No
66LRP81421459_a_at 1440882_at 1442347_at96410.4350.2178No
67PA2G41420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at96760.4320.2188No
68GPD11416204_at 1439396_x_at 1448249_at 1456732_at97510.4260.2179No
69SLC6A151426712_at97730.4240.2194No
70HPCAL41433987_at99040.4120.2158No
71CGN1430329_at 1435155_at100060.4000.2135No
72OPRD11422121_at101030.3920.2114No
73COMMD31433539_at 1454642_a_at103210.3720.2036No
74B3GALT21423084_at 1437433_at 1437644_at104810.3570.1984No
75TDRD11421513_at108630.3190.1828No
76LIN281437752_at111910.2920.1695No
77SCYL11430354_x_at 1436804_s_at 1451051_a_at114050.2700.1613No
78PAX61419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at122240.1890.1249No
79PFKFB31416432_at 1419882_at 1456676_a_at123300.1800.1211No
80MICAL21438726_at 1455685_at127390.1430.1032No
81NR0B21449854_at127610.1410.1031No
82PLA2G4A1448558_a_at128130.1370.1015No
83CHRM11439611_at 1450833_at129650.1200.0953No
84LHX91419324_at 1431598_a_at 1441313_x_at129810.1180.0953No
85HOXC131425874_at134490.0650.0743No
86IPO71442511_at 1454955_at 1458165_at136570.0440.0650No
87AK31423717_at 1423718_at 1432436_a_at 1458812_at137660.0310.0603No
88B4GALT21418080_at 1448941_at137990.0280.0590No
89USP21417168_a_at 1417169_at139380.0140.0527No
90ZZZ31434332_at 1438487_s_at 1441748_at14101-0.0040.0453No
91GTF2H11453169_a_at14164-0.0120.0425No
92TRIM461460568_at14623-0.0690.0219No
93BCL9L1419180_at 1438806_at 1443700_at 1444855_at15693-0.218-0.0258No
94ESRRA1442864_at 1460652_at16134-0.297-0.0443No
95RLF1427171_at 1439555_at 1440020_at 1446057_at 1447164_at16268-0.323-0.0485No
96B3GALT61421155_at 1435252_at 1440340_at16311-0.331-0.0485No
97HNRPF1450963_at16388-0.346-0.0500No
98ALDH3B11452301_at16477-0.364-0.0519No
99CCDC61428311_at 1459159_a_at16680-0.414-0.0587No
100FXYD21419378_a_at 1419379_x_at 1449883_at 1456601_x_at16710-0.424-0.0576No
101CBX51421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at16714-0.426-0.0552No
102IL15RA1422397_a_at 1448681_at16780-0.440-0.0556No
103ILK1449942_a_at17410-0.609-0.0809No
104IVNS1ABP1420961_a_at 1425718_a_at 1450084_s_at17445-0.621-0.0789No
105ADSS1460726_at17849-0.754-0.0930No
106SC5DL1424709_at 1434520_at 1451457_at17859-0.758-0.0890No
107CDC14A1436913_at 1443184_at 1446493_at 1459517_at18047-0.827-0.0927No
108ATF7IP1446323_at 1449192_at 1454973_at 1459096_at18107-0.846-0.0905No
109NRAS1422688_a_at 1454060_a_at18126-0.853-0.0864No
110AP3M11416375_at 1448308_at 1448309_at 1458092_at18141-0.858-0.0820No
111ARHGAP201427522_at 1429918_at18146-0.861-0.0772No
112MYCL11422087_at 1422088_at 1434777_at18223-0.888-0.0755No
113HPS51434677_at18399-0.944-0.0780No
114CHD41436343_at 1438476_a_at 1451295_a_at18887-1.114-0.0939No
115ERCC61441595_at 1442604_at19037-1.184-0.0938No
116POGK1447864_s_at 1459896_at19099-1.213-0.0895No
117FOXJ31435362_at 1438220_at 1459055_at19123-1.229-0.0834No
118FXYD61417343_at19322-1.334-0.0847No
119RPL221448398_s_at 1453118_s_at19346-1.346-0.0779No
120H3F3A1423263_at 1442087_at19390-1.370-0.0719No
121AMPD21426757_at 1438941_x_at19726-1.588-0.0781No
122NIT11417468_at 1417469_at20303-2.026-0.0927No
123RRAGC1415749_a_at20321-2.041-0.0816No
124SHMT21426423_at 1434204_x_at 1455084_x_at 1455985_x_at20408-2.106-0.0732No
125EIF3S101416659_at 1416660_at 1416661_at 1448425_at20531-2.241-0.0658No
126ZFP911426326_at 1429615_at 1429616_at 1459444_at20668-2.409-0.0580No
127TMEM241428095_a_at 1457585_at20723-2.481-0.0460No
128CSDA1435800_a_at 1451012_a_at20792-2.563-0.0342No
129UVRAG1454706_at20844-2.645-0.0211No
130RFX51423103_at20991-2.890-0.0110No
131SLC43A11440007_at 1453255_at21326-3.716-0.0047No
132RORC1425792_a_at 1425793_a_at21670-5.5930.0122No
Table: GSEA details [plain text format]



Fig 2: V$MYC_Q2   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$MYC_Q2: Random ES distribution   
Gene set null distribution of ES for V$MYC_Q2