Details for gene set V$IK3

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$IK3_01
Enrichment Score (ES)	-0.41358545
Normalized Enrichment Score (NES)	-1.629257
Nominal p-value	0.0
FDR q-value	0.10116416
FWER p-Value	0.467

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PPP1CB	1426205_at 1431328_at 1433540_x_at 1456462_x_at	287	4.199	0.0099	No
2	MAP1LC3A	1447883_x_at 1451290_at	360	3.857	0.0278	No
3	SLC6A9	1417636_at 1431812_a_at	564	3.268	0.0365	No
4	RCOR2	1417302_at	627	3.122	0.0508	No
5	PPAP2B	1429514_at 1446850_at 1448908_at	1106	2.314	0.0416	No
6	CYP17A1	1417017_at	1198	2.210	0.0496	No
7	CHST8	1428977_at	1883	1.791	0.0280	No
8	USH3A	1438347_at	2105	1.668	0.0271	No
9	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2241	1.602	0.0297	No
10	HOXB4	1451761_at 1460379_at	2455	1.499	0.0281	No
11	STARD8	1427072_at	2561	1.449	0.0313	No
12	GNAO1	1421152_a_at 1448031_at 1460383_at	2782	1.378	0.0288	No
13	CCDC3	1428549_at	3060	1.293	0.0232	No
14	TNFRSF21	1422740_at 1450731_s_at	3218	1.251	0.0228	No
15	JAG1	1421105_at 1421106_at 1434070_at	3277	1.238	0.0270	No
16	CYR61	1416039_x_at 1417848_at 1417849_at 1438133_a_at 1442340_x_at 1457823_at 1459462_at	3931	1.109	0.0031	No
17	ASCL3	1420780_at	4095	1.078	0.0016	No
18	MYT1	1422773_at 1439365_at	4382	1.035	-0.0059	No
19	RHBDF1	1424138_at	4742	0.997	-0.0169	No
20	SNX16	1424276_at 1438803_s_at 1456041_at	4807	0.989	-0.0144	No
21	CNTN4	1438782_at 1460321_at	4837	0.985	-0.0103	No
22	MECP2	1438930_s_at 1449266_at 1460246_at	5194	0.938	-0.0215	No
23	FLNC	1424063_at 1447812_x_at 1449073_at	5248	0.931	-0.0188	No
24	C2	1416051_at 1441912_x_at 1457664_x_at	5321	0.921	-0.0170	No
25	NSD1	1420881_at 1435088_at 1440972_at 1456916_at	5394	0.909	-0.0153	No
26	KCNA4	1422255_at 1438613_at	5496	0.896	-0.0150	No
27	PTGES	1439747_at 1449449_at 1449450_at	5582	0.885	-0.0141	No
28	LMX1A	1421554_at	5713	0.867	-0.0153	No
29	FGF20	1421677_at	5858	0.848	-0.0172	No
30	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	5880	0.845	-0.0135	No
31	DHRS4	1419382_a_at 1451559_a_at	5895	0.844	-0.0095	No
32	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6090	0.821	-0.0139	No
33	CDK9	1417269_at 1457240_at	6358	0.786	-0.0219	No
34	TYRO3	1425248_a_at 1425249_a_at	6450	0.774	-0.0218	No
35	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	6547	0.762	-0.0220	No
36	SH3BGRL2	1434109_at 1434211_at	6689	0.745	-0.0244	No
37	GABBR1	1422051_a_at 1425595_at 1437188_at 1455021_at	6698	0.744	-0.0207	No
38	SYNPR	1423640_at 1444331_at	7011	0.709	-0.0311	No
39	SLITRK1	1428089_at	7143	0.695	-0.0333	No
40	TMC4	1427178_at	7336	0.671	-0.0384	No
41	PRRX1	1425526_a_at 1425527_at 1425528_at 1432129_a_at 1439774_at 1458004_at	7611	0.640	-0.0475	No
42	NHLH2	1436888_at	7617	0.639	-0.0442	No
43	RBX1	1416577_a_at 1416578_at 1438623_x_at 1440061_at 1447793_x_at 1448387_at	7995	0.601	-0.0582	No
44	APBA1	1437940_at 1455369_at 1459605_at	8262	0.574	-0.0672	No
45	TRAPPC3	1416771_at	8388	0.561	-0.0699	No
46	AMBN	1449417_at	8596	0.540	-0.0764	No
47	SPINLW1	1420588_at	8923	0.509	-0.0886	No
48	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	9006	0.499	-0.0896	No
49	MAP3K13	1430137_at 1440749_at 1447699_at	9174	0.482	-0.0946	No
50	SP6	1427786_at 1427787_at 1437788_at 1442342_at	9286	0.473	-0.0971	No
51	KIFC3	1416199_at	9331	0.468	-0.0966	No
52	SLC30A3	1460654_at	9348	0.466	-0.0947	No
53	HMGA2	1422851_at 1443394_at 1446196_at 1450780_s_at 1450781_at 1458241_at	9358	0.465	-0.0926	No
54	WNT3	1450763_x_at	9366	0.464	-0.0904	No
55	NEDD1	1423196_at 1450899_at	9389	0.463	-0.0888	No
56	SLC26A6	1416275_at	9451	0.456	-0.0891	No
57	T	1419304_at	9520	0.449	-0.0898	No
58	ADAM15	1416080_at 1425170_a_at 1438760_x_at 1454206_a_at	9586	0.442	-0.0903	No
59	CD3E	1422105_at 1445748_at	9711	0.429	-0.0937	No
60	MKNK2	1418300_a_at 1449029_at	9830	0.419	-0.0968	No
61	UPP2	1460059_at	10049	0.396	-0.1046	No
62	SMPX	1418095_at	10121	0.390	-0.1057	No
63	RGS5	1420940_x_at 1420941_at	10579	0.347	-0.1248	No
64	SEMA3A	1420416_at 1420417_at 1449865_at	10699	0.336	-0.1284	No
65	FGF10	1420690_at	10875	0.318	-0.1347	No
66	C1S	1424041_s_at	10977	0.310	-0.1376	No
67	RAMP2	1418187_at	11041	0.305	-0.1388	No
68	PPP2R2B	1426621_a_at	11190	0.293	-0.1440	No
69	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	11235	0.288	-0.1445	No
70	SIX5	1427560_at	11297	0.281	-0.1457	No
71	SLC26A7	1425841_at	11426	0.268	-0.1501	No
72	HOXB9	1452317_at	11753	0.233	-0.1638	No
73	VSNL1	1420955_at 1450055_at	11806	0.228	-0.1649	No
74	BAI3	1446358_at 1454782_at	11916	0.216	-0.1688	No
75	SLIT3	1427086_at 1452296_at	11920	0.216	-0.1677	No
76	TAL1	1449389_at	12092	0.200	-0.1745	No
77	SERPINI1	1416702_at 1443756_at 1448443_at	12323	0.180	-0.1840	No
78	MAP4K4	1422615_at 1440609_at 1448050_s_at 1459912_at	12344	0.179	-0.1840	No
79	NNMT	1432517_a_at	12446	0.169	-0.1877	No
80	MAG	1460219_at	12566	0.158	-0.1923	No
81	IGFALS	1422826_at	12598	0.155	-0.1928	No
82	NAPG	1424069_at 1424070_at 1443366_at	12677	0.148	-0.1956	No
83	LIFR	1425107_a_at 1450207_at	12686	0.147	-0.1952	No
84	OTX1	1437601_at	12687	0.147	-0.1944	No
85	CHAD	1420569_at	12698	0.146	-0.1940	No
86	DNAH9	1442412_at 1457401_at	12721	0.144	-0.1942	No
87	DIO2	1418937_at 1418938_at 1426081_a_at	12980	0.118	-0.2054	No
88	LHX9	1419324_at 1431598_a_at 1441313_x_at	12981	0.118	-0.2048	No
89	HCST	1419119_at	13083	0.107	-0.2088	No
90	BNC2	1438861_at 1440593_at 1459132_at	13306	0.081	-0.2186	No
91	LMO6	1439296_at	13339	0.077	-0.2196	No
92	DNAJB8	1449223_at	13354	0.076	-0.2198	No
93	PSD	1435780_at	13404	0.071	-0.2217	No
94	CCL20	1422029_at	13409	0.070	-0.2215	No
95	PCDH10	1421311_at 1425563_s_at 1430667_at 1438134_at 1442565_at 1444301_at	13755	0.033	-0.2372	No
96	CXCL5	1419728_at	13857	0.022	-0.2417	No
97	SCML4	1427417_at 1427545_at 1440157_at	14310	-0.029	-0.2623	No
98	ACCN2	1455328_at	14347	-0.033	-0.2637	No
99	PROK2	1419681_a_at 1426176_a_at 1451952_at	14369	-0.036	-0.2645	No
100	SALL1	1450489_at	14738	-0.085	-0.2809	No
101	GRIN2B	1422223_at 1431700_at	14788	-0.090	-0.2827	No
102	HECTD1	1424141_at 1438039_at	14976	-0.112	-0.2907	No
103	DCX	1418139_at 1418140_at 1418141_at 1448974_at	15205	-0.145	-0.3003	No
104	ACE2	1425102_a_at 1425103_at 1452138_a_at	15214	-0.145	-0.2999	No
105	SLC38A5	1454622_at	15416	-0.178	-0.3082	No
106	RTN1	1429761_at	15587	-0.202	-0.3148	No
107	AMMECR1	1430697_at 1450546_at	15611	-0.206	-0.3148	No
108	SFRS16	1428961_a_at	15728	-0.221	-0.3189	No
109	RBBP9	1416174_at	15761	-0.228	-0.3191	No
110	STARD3	1417405_at	15896	-0.253	-0.3239	No
111	PUNC	1423496_a_at 1439498_at 1444981_at	15981	-0.269	-0.3262	No
112	CEPT1	1416471_at 1443090_at 1446410_at 1459406_at	15992	-0.270	-0.3252	No
113	AP1G2	1419113_at	16047	-0.281	-0.3261	No
114	FGF17	1421523_at 1456239_at	16350	-0.338	-0.3381	No
115	USP34	1434392_at 1434393_at 1444437_at 1446112_at 1460126_at	16370	-0.343	-0.3371	No
116	XPO1	1418442_at 1418443_at 1448070_at	16374	-0.344	-0.3354	No
117	E2F4	1451480_at	16422	-0.353	-0.3356	No
118	CBX8	1419198_at 1419199_at	17086	-0.518	-0.3632	No
119	MSX1	1417127_at 1448601_s_at	17320	-0.585	-0.3707	No
120	PKP4	1438677_at 1452209_at	17374	-0.601	-0.3698	No
121	TRPM3	1439026_at 1441966_at 1443723_at 1445555_at 1456633_at 1456923_at 1457927_at	17898	-0.770	-0.3896	No
122	HCN3	1451023_at	18115	-0.847	-0.3948	No
123	POU4F2	1437588_at	18173	-0.869	-0.3927	No
124	CHRNB2	1420744_at 1436428_at 1441837_at	18177	-0.872	-0.3880	No
125	BAZ2B	1435240_at 1440984_at 1441556_at 1442704_at 1442971_at 1445048_at 1448007_at 1458077_at	18390	-0.942	-0.3926	No
126	SIRT6	1429631_at	18418	-0.951	-0.3886	No
127	TGIF2	1431115_at 1434400_at	18425	-0.955	-0.3836	No
128	USP25	1442104_at 1442826_at 1445116_at 1445861_at 1448939_at	18539	-0.992	-0.3833	No
129	EHF	1419474_a_at 1419475_a_at 1447760_x_at 1451375_at	18594	-1.004	-0.3803	No
130	MKL1	1434900_at	18597	-1.005	-0.3748	No
131	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18671	-1.030	-0.3725	No
132	RHOQ	1427918_a_at 1440925_at	18807	-1.081	-0.3728	No
133	POLR2B	1433552_a_at	18979	-1.164	-0.3742	No
134	TNNI2	1416889_at 1438608_at 1438609_x_at	18981	-1.164	-0.3679	No
135	USP52	1426700_a_at	19020	-1.177	-0.3631	No
136	TCF8	1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at	19055	-1.192	-0.3581	No
137	MBNL2	1433754_at 1436858_at 1446475_at 1455827_at 1457237_at 1457477_at	19582	-1.491	-0.3741	No
138	C7ORF10	1424597_at 1451404_at	19641	-1.532	-0.3683	No
139	ACTN1	1427385_s_at 1428585_at 1452415_at	20628	-2.369	-0.4006	Yes
140	MTSS1	1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at	20660	-2.399	-0.3888	Yes
141	OSBPL7	1428893_at 1459966_at	20664	-2.402	-0.3757	Yes
142	MADD	1425735_at 1455502_at	21006	-2.926	-0.3753	Yes
143	STAG2	1421849_at 1450396_at	21067	-3.048	-0.3612	Yes
144	RAB11B	1423448_at	21163	-3.275	-0.3476	Yes
145	KCNH2	1449544_a_at	21191	-3.341	-0.3305	Yes
146	ARPC2	1437148_at 1442295_at	21214	-3.402	-0.3127	Yes
147	FOS	1423100_at	21307	-3.658	-0.2968	Yes
148	GATA3	1448886_at	21331	-3.739	-0.2773	Yes
149	SPIB	1460407_at	21336	-3.766	-0.2568	Yes
150	EIF4A2	1450934_at	21350	-3.811	-0.2364	Yes
151	HIVEP1	1422742_at	21365	-3.861	-0.2158	Yes
152	UBXD2	1426484_at 1426485_at 1426486_at	21393	-3.955	-0.1953	Yes
153	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	21442	-4.147	-0.1747	Yes
154	EDEM1	1424065_at 1451218_at	21594	-5.067	-0.1538	Yes
155	WSB2	1421846_at 1421847_at 1438129_at	21747	-6.370	-0.1257	Yes
156	PDCD10	1437530_at 1448527_at 1448528_at	21867	-7.732	-0.0886	Yes
157	EGR3	1421486_at 1436329_at	21923	-8.252	-0.0457	Yes
158	EGR1	1417065_at	21931	-8.413	0.0002	Yes