Details for gene set V$HFH8

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$HFH8_01
Enrichment Score (ES)	-0.4234424
Normalized Enrichment Score (NES)	-1.6258427
Nominal p-value	0.0017953322
FDR q-value	0.093403675
FWER p-Value	0.481

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PPP1CB	1426205_at 1431328_at 1433540_x_at 1456462_x_at	287	4.199	0.0075	No
2	EMX2	1456258_at	293	4.147	0.0276	No
3	IMPDH2	1415851_a_at 1415852_at	425	3.642	0.0395	No
4	CCND1	1417419_at 1417420_at 1448698_at	741	2.850	0.0391	No
5	RUNX1	1422864_at 1422865_at 1427650_a_at 1427847_at 1440878_at 1444527_at 1446930_at 1452530_a_at 1452531_at 1452578_at 1459470_at	957	2.503	0.0415	No
6	HESX1	1420604_at	1324	2.113	0.0351	No
7	BCL11B	1440137_at 1441762_at 1450339_a_at	1772	1.860	0.0237	No
8	KCTD15	1435339_at	1802	1.845	0.0315	No
9	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	1986	1.735	0.0316	No
10	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2241	1.602	0.0278	No
11	ANKRD28	1434630_at 1454801_at	2458	1.497	0.0252	No
12	FOXD3	1422210_at	2547	1.454	0.0283	No
13	ASPA	1418472_at	2722	1.396	0.0272	No
14	BRIP1	1458427_at	2828	1.360	0.0291	No
15	KCNQ5	1427426_at 1441071_at	3034	1.302	0.0261	No
16	CREB5	1440089_at 1442576_at 1457222_at	3136	1.272	0.0277	No
17	GRM3	1430136_at	3201	1.254	0.0309	No
18	SLC39A8	1416832_at 1448482_at	3268	1.240	0.0340	No
19	PRKCBP1	1426614_at 1429415_at 1445827_at 1456143_at 1458617_at	4006	1.092	0.0055	No
20	LMO4	1420981_a_at 1439651_at	4400	1.032	-0.0075	No
21	SYT6	1420188_at 1426106_a_at 1449766_at 1449767_x_at	4467	1.024	-0.0055	No
22	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	4532	1.018	-0.0034	No
23	BUB3	1416815_s_at 1448058_s_at 1448473_at 1459104_at 1459918_at	4606	1.010	-0.0018	No
24	FLRT3	1429310_at 1453102_at	4695	1.001	-0.0009	No
25	MAPK10	1437195_x_at 1448342_at 1458002_at 1458062_at 1458513_at	4773	0.992	0.0004	No
26	HOXC4	1422870_at	4907	0.978	-0.0009	No
27	CYP26B1	1460011_at	5070	0.956	-0.0036	No
28	GFRA1	1421973_at 1439015_at 1450440_at	5359	0.914	-0.0123	No
29	KCNA4	1422255_at 1438613_at	5496	0.896	-0.0142	No
30	SIM1	1420736_at 1449967_at	5590	0.884	-0.0141	No
31	TOB1	1423176_at 1440844_at	5630	0.879	-0.0116	No
32	NR2F1	1418157_at 1422412_x_at	5641	0.877	-0.0077	No
33	OPA3	1455131_at	5654	0.876	-0.0040	No
34	SCG3	1448628_at	5664	0.875	-0.0001	No
35	RPS6KB1	1428849_at 1446376_at 1454956_at 1457562_at 1459951_at 1460705_at	5736	0.863	0.0009	No
36	ZFP95	1424892_at 1430562_at	5936	0.839	-0.0041	No
37	RASD1	1423619_at	5939	0.838	-0.0001	No
38	NOSTRIN	1441075_at	5983	0.834	0.0021	No
39	FHL2	1419184_a_at	6035	0.828	0.0038	No
40	HOXA11	1420414_at	6070	0.824	0.0063	No
41	ITPKB	1435272_at 1441058_at	6385	0.782	-0.0043	No
42	CXCL2	1449984_at	6533	0.764	-0.0073	No
43	CXXC5	1431469_a_at 1448960_at	6785	0.736	-0.0152	No
44	HR	1422110_at 1435950_at	6863	0.726	-0.0152	No
45	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	6975	0.714	-0.0167	No
46	SNCB	1418053_at	7357	0.667	-0.0310	No
47	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	7614	0.640	-0.0396	No
48	BRUNOL4	1426929_at 1426930_at 1452240_at 1458475_at	7858	0.615	-0.0477	No
49	ESRRG	1421747_at 1455267_at 1457896_at	8157	0.584	-0.0585	No
50	COL13A1	1422866_at	8526	0.547	-0.0727	No
51	ATP1B4	1422908_at	8533	0.546	-0.0703	No
52	MESP1	1426557_at	8741	0.525	-0.0772	No
53	INMT	1418697_at	8947	0.505	-0.0842	No
54	CRH	1457984_at	9179	0.481	-0.0924	No
55	TNF	1419607_at	9219	0.478	-0.0919	No
56	LASP1	1438633_x_at 1438634_x_at 1439264_x_at 1444947_at 1448207_at 1455470_x_at 1456309_x_at 1456469_x_at 1456578_x_at 1460173_at	9267	0.475	-0.0917	No
57	KIAA1715	1429120_at 1453035_at 1456859_at	9376	0.464	-0.0944	No
58	PRIMA1	1425304_s_at	9401	0.461	-0.0932	No
59	HOXA10	1431475_a_at 1446408_at	9499	0.451	-0.0954	No
60	ETV1	1422607_at 1445314_at 1450684_at	9512	0.450	-0.0938	No
61	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	9733	0.427	-0.1018	No
62	POU3F2	1450831_at 1453478_at 1457734_at	10016	0.399	-0.1128	No
63	WNT2	1449425_at	10054	0.396	-0.1125	No
64	ACP6	1444410_at 1448445_at	10408	0.364	-0.1269	No
65	CHD1	1420990_at 1444787_at 1444788_x_at 1450077_at 1457473_at	10504	0.355	-0.1295	No
66	RORA	1420583_a_at 1424034_at 1424035_at 1436325_at 1436326_at 1441085_at 1443511_at 1443647_at 1446360_at 1455165_at 1457177_at 1458129_at	10565	0.349	-0.1306	No
67	PDLIM3	1443299_at 1449178_at	10580	0.347	-0.1295	No
68	ABCA1	1421839_at 1421840_at 1450392_at	10652	0.341	-0.1311	No
69	PPP2R2B	1426621_a_at	11190	0.293	-0.1543	No
70	DTNA	1419223_a_at 1425292_at 1426066_a_at 1427588_a_at 1429768_at 1447280_at 1456069_at 1458908_at	11539	0.256	-0.1691	No
71	GTF2A1	1421357_at	11616	0.248	-0.1713	No
72	HOXB9	1452317_at	11753	0.233	-0.1764	No
73	BAI3	1446358_at 1454782_at	11916	0.216	-0.1828	No
74	SLIT3	1427086_at 1452296_at	11920	0.216	-0.1819	No
75	C1QTNF3	1422606_at	12113	0.199	-0.1897	No
76	SOX2	1416967_at	12142	0.197	-0.1900	No
77	HAND2	1422221_at 1436041_at 1443854_at 1446812_at	12269	0.185	-0.1949	No
78	POU2F1	1419716_a_at 1427695_a_at 1427835_at	12497	0.165	-0.2045	No
79	SCNN1G	1419079_at	12611	0.154	-0.2090	No
80	ID2	1422537_a_at 1435176_a_at 1453596_at	12717	0.145	-0.2131	No
81	USP3	1425022_at 1425023_at 1435531_at 1441056_at 1446886_at	12853	0.131	-0.2186	No
82	ORC4L	1423336_at 1423337_at 1431172_at 1453804_a_at	12855	0.131	-0.2180	No
83	OTX2	1425926_a_at	12906	0.126	-0.2197	No
84	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	13153	0.100	-0.2305	No
85	STARD13	1452604_at	13173	0.097	-0.2309	No
86	A2BP1	1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at	13219	0.092	-0.2325	No
87	SNCAIP	1423499_at 1430463_a_at 1441037_at	13329	0.078	-0.2371	No
88	IBSP	1417484_at 1417485_at	13399	0.071	-0.2400	No
89	IL1RL1	1422317_a_at 1425145_at	13406	0.071	-0.2399	No
90	NEUROD2	1444362_at	13788	0.029	-0.2572	No
91	KLF12	1439846_at 1439847_s_at 1441040_at 1455521_at	13967	0.010	-0.2654	No
92	ARTN	1432032_a_at	13982	0.009	-0.2660	No
93	PMCH	1429361_at	13989	0.008	-0.2662	No
94	INHBA	1422053_at 1458291_at	13990	0.008	-0.2662	No
95	CACNG2	1420596_at 1440210_at 1453363_at	14243	-0.021	-0.2776	No
96	NFIB	1416293_at 1427680_a_at 1434101_at 1434102_at 1438072_at 1438244_at 1442214_at 1444800_at 1448288_at 1454834_at	14282	-0.026	-0.2793	No
97	CLDN8	1449091_at	14423	-0.043	-0.2855	No
98	MASP1	1419677_at 1425985_s_at 1438602_s_at 1438603_x_at 1455346_at	14543	-0.058	-0.2907	No
99	GPR109A	1419721_at	14554	-0.060	-0.2908	No
100	CLN5	1426886_at	14761	-0.087	-0.2999	No
101	ACCN1	1417994_a_at	14767	-0.088	-0.2996	No
102	ASXL1	1434561_at 1435077_at 1458380_at	15139	-0.135	-0.3160	No
103	DPP10	1436087_at 1436661_at 1441853_at 1442491_at 1446514_at 1458091_at	15153	-0.137	-0.3159	No
104	XPO7	1415682_at 1435814_at 1439411_a_at 1442836_at 1446826_at	15224	-0.147	-0.3184	No
105	NTF3	1434802_s_at 1450803_at	15301	-0.159	-0.3211	No
106	IRS4	1441429_at	15441	-0.181	-0.3266	No
107	ENPEP	1448649_at	15711	-0.220	-0.3379	No
108	YES1	1418470_at 1449090_a_at 1456843_at 1458878_at	15836	-0.240	-0.3424	No
109	AP1G2	1419113_at	16047	-0.281	-0.3507	No
110	APBA2BP	1431946_a_at 1447907_x_at	16097	-0.290	-0.3515	No
111	NTRK3	1422329_a_at 1425070_at 1425071_s_at 1426003_at 1433825_at 1443970_at 1455917_at	16264	-0.322	-0.3575	No
112	MGLL	1426785_s_at 1431331_at 1450391_a_at 1453836_a_at	16281	-0.325	-0.3567	No
113	FSTL1	1416221_at 1448259_at	16346	-0.338	-0.3580	No
114	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16639	-0.402	-0.3694	No
115	KIF21A	1447236_at 1450738_at 1455029_at	16687	-0.417	-0.3695	No
116	LCP2	1418641_at 1418642_at	16988	-0.493	-0.3809	No
117	ATOH8	1426418_at	17054	-0.508	-0.3813	No
118	LBX1	1422323_a_at 1427400_at	17591	-0.672	-0.4026	No
119	SSH3	1447929_at	17643	-0.685	-0.4016	No
120	GOLGA1	1431120_a_at 1432054_at 1435027_at 1446087_at	17773	-0.723	-0.4040	No
121	NIN	1419078_at 1444155_at	17900	-0.771	-0.4060	No
122	SLC16A6	1417884_at	18076	-0.835	-0.4099	No
123	CDAN1	1428166_at	18263	-0.900	-0.4140	No
124	ETV5	1420998_at 1428142_at 1450082_s_at	18320	-0.919	-0.4121	No
125	SCAMP1	1426775_s_at 1453054_at	18375	-0.936	-0.4100	No
126	HMGN3	1431777_a_at 1434875_a_at 1459040_at	18508	-0.982	-0.4112	No
127	SLC35C2	1420054_s_at 1420055_at 1460731_at	18509	-0.983	-0.4064	No
128	TCF7L2	1425229_a_at 1426639_a_at 1429427_s_at 1429428_at 1441756_at 1446452_at 1447071_at	18640	-1.022	-0.4073	No
129	IHPK2	1428373_at 1435319_at	18675	-1.030	-0.4038	No
130	BAMBI	1423753_at	18760	-1.063	-0.4024	No
131	TGIF	1422286_a_at	18917	-1.127	-0.4040	No
132	MARCKS	1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at	19290	-1.314	-0.4147	No
133	RAD21	1416161_at 1416162_at 1455938_x_at	19482	-1.433	-0.4164	Yes
134	TBCC	1424644_at 1451423_at	19504	-1.448	-0.4102	Yes
135	ZFYVE1	1435071_at 1435072_at	19572	-1.487	-0.4060	Yes
136	CBX6	1424407_s_at 1429290_at	19821	-1.663	-0.4092	Yes
137	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	19865	-1.693	-0.4029	Yes
138	BEX2	1417388_at	20034	-1.828	-0.4016	Yes
139	MCTS1	1425018_at	20224	-1.982	-0.4005	Yes
140	PRKAG1	1417690_at 1433533_x_at 1457803_at	20271	-2.010	-0.3928	Yes
141	PELI2	1419006_s_at 1436966_at 1437181_at	20442	-2.144	-0.3900	Yes
142	SH3BGRL3	1416528_at	20554	-2.267	-0.3840	Yes
143	FLI1	1422024_at 1433512_at 1441584_at	20634	-2.375	-0.3759	Yes
144	CPEB4	1420617_at 1420618_at 1449931_at	20663	-2.401	-0.3654	Yes
145	KLF3	1421604_a_at 1429360_at 1431630_a_at 1441200_at 1442920_at 1454666_at	20733	-2.491	-0.3563	Yes
146	ELF1	1417540_at 1439319_at	20812	-2.600	-0.3471	Yes
147	POGZ	1434650_at 1454827_at 1455046_a_at 1457748_at	21003	-2.910	-0.3415	Yes
148	LTA	1420353_at	21087	-3.107	-0.3301	Yes
149	UBE2H	1418631_at 1418632_at 1428791_at 1438971_x_at 1447374_at 1459930_at	21165	-3.289	-0.3174	Yes
150	PAIP2	1448493_at	21197	-3.353	-0.3024	Yes
151	KCTD12	1434881_s_at	21374	-3.890	-0.2913	Yes
152	GPR18	1439141_at	21422	-4.063	-0.2735	Yes
153	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	21442	-4.147	-0.2540	Yes
154	NEDD4	1421955_a_at 1444044_at 1450431_a_at 1451109_a_at	21487	-4.321	-0.2347	Yes
155	FBXO11	1434108_at	21601	-5.118	-0.2148	Yes
156	DUSP1	1448830_at	21619	-5.241	-0.1898	Yes
157	SMAD1	1416081_at 1448208_at 1459843_s_at	21702	-5.922	-0.1644	Yes
158	TSPYL4	1424029_at	21710	-5.990	-0.1353	Yes
159	SLC35D1	1433595_at 1445629_at	21761	-6.534	-0.1054	Yes
160	NR4A1	1416505_at	21809	-7.139	-0.0725	Yes
161	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	21861	-7.700	-0.0370	Yes
162	EGR2	1427682_a_at 1427683_at	21921	-8.208	0.0007	Yes