Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | SCID |
GeneSet | V$E2F_Q4 |
Enrichment Score (ES) | 0.3746461 |
Normalized Enrichment Score (NES) | 1.5334771 |
Nominal p-value | 0.0 |
FDR q-value | 0.10777147 |
FWER p-Value | 0.731 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | HNRPA1 | 1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at | 26 | 7.887 | 0.0274 | Yes | ||
2 | CDT1 | 1424143_a_at 1424144_at 1455791_at | 87 | 6.599 | 0.0487 | Yes | ||
3 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 154 | 5.273 | 0.0648 | Yes | ||
4 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 157 | 5.258 | 0.0838 | Yes | ||
5 | CDC6 | 1417019_a_at | 179 | 5.023 | 0.1011 | Yes | ||
6 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 182 | 5.000 | 0.1191 | Yes | ||
7 | GMNN | 1417506_at | 184 | 4.969 | 0.1371 | Yes | ||
8 | RAD51 | 1418281_at | 198 | 4.831 | 0.1541 | Yes | ||
9 | SNRPD1 | 1416336_s_at | 243 | 4.511 | 0.1684 | Yes | ||
10 | CLSPN | 1441984_at 1456280_at | 305 | 4.093 | 0.1805 | Yes | ||
11 | UNG | 1425753_a_at | 393 | 3.740 | 0.1901 | Yes | ||
12 | POLD1 | 1448187_at 1456055_x_at | 413 | 3.679 | 0.2026 | Yes | ||
13 | RANBP1 | 1422547_at | 490 | 3.453 | 0.2116 | Yes | ||
14 | RQCD1 | 1450887_at | 578 | 3.231 | 0.2193 | Yes | ||
15 | PHF5A | 1424170_at | 640 | 3.083 | 0.2277 | Yes | ||
16 | TOPBP1 | 1452241_at 1458480_at | 680 | 2.980 | 0.2368 | Yes | ||
17 | DNAJC9 | 1426473_at | 744 | 2.841 | 0.2442 | Yes | ||
18 | UXT | 1418986_a_at | 817 | 2.729 | 0.2508 | Yes | ||
19 | MCM2 | 1434079_s_at 1448777_at | 864 | 2.652 | 0.2583 | Yes | ||
20 | MXD3 | 1422970_at 1438847_at 1448878_at | 880 | 2.625 | 0.2672 | Yes | ||
21 | YBX2 | 1420762_a_at | 914 | 2.565 | 0.2750 | Yes | ||
22 | ATF5 | 1425927_a_at | 927 | 2.543 | 0.2836 | Yes | ||
23 | WEE1 | 1416773_at 1416774_at | 973 | 2.481 | 0.2906 | Yes | ||
24 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 1096 | 2.321 | 0.2934 | Yes | ||
25 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 1113 | 2.307 | 0.3011 | Yes | ||
26 | POLA2 | 1425794_at 1448369_at 1456713_at | 1163 | 2.239 | 0.3069 | Yes | ||
27 | SLC9A5 | 1420070_a_at 1455760_at | 1189 | 2.218 | 0.3138 | Yes | ||
28 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 1200 | 2.206 | 0.3214 | Yes | ||
29 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1211 | 2.198 | 0.3289 | Yes | ||
30 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 1340 | 2.099 | 0.3307 | Yes | ||
31 | MRPL40 | 1448849_at | 1386 | 2.068 | 0.3361 | Yes | ||
32 | SEMA5A | 1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at | 1639 | 1.933 | 0.3315 | Yes | ||
33 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 1775 | 1.859 | 0.3321 | Yes | ||
34 | PCSK1 | 1421396_at | 1892 | 1.786 | 0.3332 | Yes | ||
35 | PVRL1 | 1438111_at 1438421_at 1440131_at 1446488_at 1450819_at | 1919 | 1.772 | 0.3385 | Yes | ||
36 | NELL2 | 1423560_at 1423561_at | 1955 | 1.755 | 0.3433 | Yes | ||
37 | EPC1 | 1418850_at 1429914_at 1440198_at 1440742_at 1442279_at 1443675_at 1458315_at | 2019 | 1.711 | 0.3466 | Yes | ||
38 | SYNGR4 | 1418875_at | 2023 | 1.710 | 0.3527 | Yes | ||
39 | CDCA7 | 1428069_at 1445681_at | 2034 | 1.706 | 0.3584 | Yes | ||
40 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 2078 | 1.682 | 0.3625 | Yes | ||
41 | PRPS1 | 1416052_at | 2163 | 1.639 | 0.3646 | Yes | ||
42 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 2179 | 1.627 | 0.3698 | Yes | ||
43 | AK2 | 1448450_at 1448451_at | 2254 | 1.592 | 0.3722 | Yes | ||
44 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 2434 | 1.506 | 0.3695 | Yes | ||
45 | DNAJC11 | 1433880_at 1433881_at 1439763_at 1446686_at 1447055_at | 2441 | 1.502 | 0.3746 | Yes | ||
46 | MCM8 | 1429557_at | 2690 | 1.405 | 0.3684 | No | ||
47 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 3174 | 1.261 | 0.3508 | No | ||
48 | EPHB1 | 1455188_at | 3253 | 1.242 | 0.3517 | No | ||
49 | JPH1 | 1421520_at 1438428_at | 3292 | 1.235 | 0.3544 | No | ||
50 | E2F7 | 1437187_at | 3452 | 1.200 | 0.3515 | No | ||
51 | ZBTB4 | 1429722_at 1460488_at | 3591 | 1.168 | 0.3494 | No | ||
52 | PAQR4 | 1423101_at | 3598 | 1.166 | 0.3533 | No | ||
53 | PKMYT1 | 1418481_at 1438601_at | 3669 | 1.152 | 0.3543 | No | ||
54 | STMN1 | 1415849_s_at | 4037 | 1.088 | 0.3414 | No | ||
55 | INSM1 | 1421399_at 1455865_at | 4319 | 1.043 | 0.3323 | No | ||
56 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 4532 | 1.018 | 0.3262 | No | ||
57 | POLE2 | 1427094_at 1431440_at | 4567 | 1.013 | 0.3284 | No | ||
58 | HNRPD | 1425142_a_at 1446083_at | 4634 | 1.006 | 0.3290 | No | ||
59 | ERBB2IP | 1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at | 4719 | 0.999 | 0.3287 | No | ||
60 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 4848 | 0.983 | 0.3264 | No | ||
61 | DNAJC5G | 1437814_at | 5119 | 0.949 | 0.3175 | No | ||
62 | RASAL2 | 1436910_at 1444671_at | 5125 | 0.949 | 0.3207 | No | ||
63 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 5146 | 0.945 | 0.3232 | No | ||
64 | STK35 | 1431107_at 1439802_at | 5291 | 0.925 | 0.3200 | No | ||
65 | HMGN2 | 1433507_a_at | 5345 | 0.917 | 0.3209 | No | ||
66 | MCM4 | 1416214_at 1436708_x_at | 5554 | 0.888 | 0.3145 | No | ||
67 | TREX2 | 1449367_at | 5642 | 0.877 | 0.3137 | No | ||
68 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 5753 | 0.861 | 0.3118 | No | ||
69 | FHOD1 | 1435557_at | 5854 | 0.848 | 0.3103 | No | ||
70 | ATAD2 | 1436174_at 1443146_at 1443229_at | 5878 | 0.845 | 0.3123 | No | ||
71 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 6042 | 0.827 | 0.3078 | No | ||
72 | HS6ST3 | 1421599_at | 6063 | 0.824 | 0.3099 | No | ||
73 | TYRO3 | 1425248_a_at 1425249_a_at | 6450 | 0.774 | 0.2950 | No | ||
74 | CORT | 1449820_at | 6608 | 0.756 | 0.2905 | No | ||
75 | PCNA | 1417947_at | 6659 | 0.750 | 0.2909 | No | ||
76 | H2AFZ | 1441370_at | 6710 | 0.743 | 0.2913 | No | ||
77 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 6792 | 0.736 | 0.2903 | No | ||
78 | AP4M1 | 1418846_at | 6908 | 0.721 | 0.2876 | No | ||
79 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 6975 | 0.714 | 0.2872 | No | ||
80 | CDC45L | 1416575_at 1457838_at | 7163 | 0.692 | 0.2811 | No | ||
81 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 7270 | 0.679 | 0.2787 | No | ||
82 | KCNA6 | 1421568_at 1441049_at 1456954_at | 7455 | 0.656 | 0.2726 | No | ||
83 | ILF3 | 1422546_at 1436802_at 1460669_at | 8047 | 0.595 | 0.2476 | No | ||
84 | E2F3 | 1427462_at 1434564_at | 8495 | 0.550 | 0.2291 | No | ||
85 | MYH10 | 1441057_at 1452740_at | 8520 | 0.547 | 0.2300 | No | ||
86 | RHD | 1417049_at | 9119 | 0.487 | 0.2043 | No | ||
87 | WNT3 | 1450763_x_at | 9366 | 0.464 | 0.1947 | No | ||
88 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 9538 | 0.447 | 0.1884 | No | ||
89 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 9868 | 0.416 | 0.1748 | No | ||
90 | SLC6A4 | 1417150_at | 10178 | 0.385 | 0.1620 | No | ||
91 | GABRB3 | 1421189_at 1421190_at 1435021_at | 10710 | 0.335 | 0.1389 | No | ||
92 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 11491 | 0.262 | 0.1040 | No | ||
93 | MAZ | 1427099_at | 11722 | 0.237 | 0.0943 | No | ||
94 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 11955 | 0.213 | 0.0844 | No | ||
95 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 12145 | 0.196 | 0.0764 | No | ||
96 | HOXC10 | 1439798_at | 12216 | 0.190 | 0.0739 | No | ||
97 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 12224 | 0.189 | 0.0743 | No | ||
98 | ARHGAP11A | 1438434_at | 12675 | 0.148 | 0.0542 | No | ||
99 | UFD1L | 1418087_at 1432367_a_at | 12816 | 0.136 | 0.0482 | No | ||
100 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 12893 | 0.127 | 0.0452 | No | ||
101 | CTNND2 | 1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at | 13298 | 0.082 | 0.0269 | No | ||
102 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 13424 | 0.068 | 0.0214 | No | ||
103 | PHF15 | 1430081_at 1455345_at | 13491 | 0.061 | 0.0186 | No | ||
104 | ACBD6 | 1452601_a_at 1453199_at | 13586 | 0.050 | 0.0145 | No | ||
105 | IPO7 | 1442511_at 1454955_at 1458165_at | 13657 | 0.044 | 0.0114 | No | ||
106 | CHD2 | 1444246_at 1445843_at | 14053 | 0.001 | -0.0067 | No | ||
107 | DDX17 | 1437773_x_at 1439037_at 1452155_a_at | 14190 | -0.015 | -0.0129 | No | ||
108 | PODN | 1435180_at | 14274 | -0.025 | -0.0166 | No | ||
109 | MSH2 | 1416988_at 1447888_x_at | 15547 | -0.196 | -0.0743 | No | ||
110 | KCND2 | 1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at | 15580 | -0.201 | -0.0751 | No | ||
111 | FMO4 | 1425799_at 1444852_at | 15598 | -0.204 | -0.0751 | No | ||
112 | CRK | 1416201_at 1425855_a_at 1436835_at 1448248_at 1460176_at | 15815 | -0.236 | -0.0842 | No | ||
113 | SLC38A1 | 1415903_at 1454764_s_at | 15849 | -0.242 | -0.0848 | No | ||
114 | CASP8AP2 | 1449217_at | 16514 | -0.373 | -0.1140 | No | ||
115 | PHF13 | 1455175_at | 16607 | -0.393 | -0.1168 | No | ||
116 | WHSC1L1 | 1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at | 16639 | -0.402 | -0.1167 | No | ||
117 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 16648 | -0.405 | -0.1156 | No | ||
118 | CBX5 | 1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at | 16714 | -0.426 | -0.1171 | No | ||
119 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 16974 | -0.491 | -0.1272 | No | ||
120 | CDC25A | 1417131_at 1417132_at 1445995_at | 17039 | -0.504 | -0.1283 | No | ||
121 | KPNB1 | 1416925_at 1434357_a_at 1448526_at 1451967_x_at | 17098 | -0.521 | -0.1290 | No | ||
122 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 17099 | -0.522 | -0.1272 | No | ||
123 | NRP2 | 1425433_a_at 1426528_at 1435349_at 1452552_at 1456778_at 1459256_at | 17189 | -0.545 | -0.1293 | No | ||
124 | NUP153 | 1441689_at 1441733_s_at 1452176_at | 17190 | -0.545 | -0.1273 | No | ||
125 | GPRC5B | 1424613_at 1451411_at | 17285 | -0.575 | -0.1295 | No | ||
126 | PRKDC | 1451576_at | 17670 | -0.693 | -0.1446 | No | ||
127 | SFRS2 | 1415807_s_at 1427504_s_at 1427816_at 1452439_s_at | 17738 | -0.710 | -0.1451 | No | ||
128 | CCNT1 | 1419313_at 1456477_at | 17749 | -0.716 | -0.1430 | No | ||
129 | EED | 1448653_at | 17850 | -0.755 | -0.1448 | No | ||
130 | PPM1D | 1434142_at 1449092_at 1459069_at | 17915 | -0.774 | -0.1450 | No | ||
131 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 18037 | -0.823 | -0.1475 | No | ||
132 | HCN3 | 1451023_at | 18115 | -0.847 | -0.1480 | No | ||
133 | FBXO5 | 1429499_at | 18355 | -0.930 | -0.1556 | No | ||
134 | EZH2 | 1416544_at 1444263_at | 18393 | -0.943 | -0.1539 | No | ||
135 | USP37 | 1434242_at 1438212_at | 18578 | -1.001 | -0.1587 | No | ||
136 | SFRS12 | 1427134_at 1427135_at 1427136_s_at 1458056_at | 18766 | -1.066 | -0.1634 | No | ||
137 | USP52 | 1426700_a_at | 19020 | -1.177 | -0.1707 | No | ||
138 | BRMS1L | 1452850_s_at 1460443_at | 19085 | -1.203 | -0.1693 | No | ||
139 | PHC1 | 1423212_at | 19196 | -1.261 | -0.1698 | No | ||
140 | TBX6 | 1449868_at | 19330 | -1.339 | -0.1710 | No | ||
141 | ALDH6A1 | 1448104_at | 19447 | -1.406 | -0.1713 | No | ||
142 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 19448 | -1.408 | -0.1661 | No | ||
143 | HNRPUL1 | 1451984_at | 19530 | -1.468 | -0.1645 | No | ||
144 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 19865 | -1.693 | -0.1737 | No | ||
145 | DDB2 | 1425706_a_at 1436680_s_at | 20152 | -1.933 | -0.1798 | No | ||
146 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 20178 | -1.953 | -0.1739 | No | ||
147 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 20185 | -1.957 | -0.1671 | No | ||
148 | IL4I1 | 1419192_at | 20344 | -2.050 | -0.1669 | No | ||
149 | ZCCHC8 | 1423755_at 1441639_at | 20345 | -2.051 | -0.1594 | No | ||
150 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 20495 | -2.198 | -0.1583 | No | ||
151 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 20497 | -2.200 | -0.1503 | No | ||
152 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 20506 | -2.207 | -0.1427 | No | ||
153 | CTCF | 1418330_at 1449042_at | 20645 | -2.384 | -0.1404 | No | ||
154 | PPP1CC | 1440594_at | 20736 | -2.496 | -0.1354 | No | ||
155 | PIM1 | 1423006_at 1435458_at | 20778 | -2.545 | -0.1281 | No | ||
156 | ABI2 | 1433985_at 1436984_at 1444783_at 1458053_at 1460153_at | 20908 | -2.737 | -0.1241 | No | ||
157 | SP3 | 1431804_a_at 1459360_at | 21004 | -2.910 | -0.1179 | No | ||
158 | STAG2 | 1421849_at 1450396_at | 21067 | -3.048 | -0.1096 | No | ||
159 | RAB11B | 1423448_at | 21163 | -3.275 | -0.1021 | No | ||
160 | PPP1R8 | 1424554_at 1435821_s_at | 21545 | -4.639 | -0.1028 | No | ||
161 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21590 | -5.042 | -0.0865 | No | ||
162 | MCM3 | 1420029_at 1426653_at | 21738 | -6.271 | -0.0705 | No | ||
163 | ARID4A | 1436191_at 1438464_at 1456420_at | 21755 | -6.438 | -0.0478 | No | ||
164 | ID3 | 1416630_at | 21832 | -7.406 | -0.0244 | No | ||
165 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 21911 | -8.023 | 0.0011 | No |