Details for gene set V$E2F

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	V$E2F_03
Enrichment Score (ES)	0.3851956
Normalized Enrichment Score (NES)	1.5764068
Nominal p-value	0.0023696683
FDR q-value	0.092508316
FWER p-Value	0.55

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	BMP7	1418910_at 1432410_a_at	16	8.005	0.0255	Yes
2	EIF2S1	1440272_at 1452662_a_at	25	7.902	0.0511	Yes
3	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	26	7.887	0.0770	Yes
4	LUC7L2	1423251_at 1427087_at 1436165_at 1436766_at 1436767_at 1437761_at 1458423_at	40	7.725	0.1018	Yes
5	LGALS1	1419573_a_at 1455439_a_at	146	5.321	0.1144	Yes
6	CDKN1A	1421679_a_at 1424638_at	161	5.189	0.1308	Yes
7	CDC6	1417019_a_at	179	5.023	0.1465	Yes
8	MCM6	1416251_at 1438852_x_at 1447756_x_at	182	5.000	0.1629	Yes
9	GMNN	1417506_at	184	4.969	0.1791	Yes
10	RAD51	1418281_at	198	4.831	0.1944	Yes
11	LIG1	1416641_at	239	4.526	0.2074	Yes
12	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	292	4.160	0.2187	Yes
13	UNG	1425753_a_at	393	3.740	0.2264	Yes
14	POLD1	1448187_at 1456055_x_at	413	3.679	0.2376	Yes
15	RPA2	1416433_at 1454011_a_at	424	3.645	0.2491	Yes
16	RANBP1	1422547_at	490	3.453	0.2574	Yes
17	RCOR2	1417302_at	627	3.122	0.2614	Yes
18	TIAM1	1418057_at 1444373_at 1453887_a_at	632	3.108	0.2715	Yes
19	MELK	1416558_at	663	3.019	0.2800	Yes
20	TOPBP1	1452241_at 1458480_at	680	2.980	0.2890	Yes
21	MRPL18	1448373_at	732	2.874	0.2961	Yes
22	DNAJC9	1426473_at	744	2.841	0.3050	Yes
23	UXT	1418986_a_at	817	2.729	0.3106	Yes
24	MCM2	1434079_s_at 1448777_at	864	2.652	0.3172	Yes
25	MXD3	1422970_at 1438847_at 1448878_at	880	2.625	0.3251	Yes
26	ORC1L	1422663_at 1443172_at	950	2.513	0.3302	Yes
27	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1113	2.307	0.3303	Yes
28	POLA2	1425794_at 1448369_at 1456713_at	1163	2.239	0.3354	Yes
29	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	1174	2.230	0.3423	Yes
30	NRIP3	1418104_at 1431597_a_at 1448954_at	1223	2.192	0.3473	Yes
31	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	1281	2.143	0.3517	Yes
32	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	1291	2.137	0.3583	Yes
33	MYC	1424942_a_at	1314	2.118	0.3643	Yes
34	PCSK4	1425824_a_at	1630	1.936	0.3562	Yes
35	SEMA5A	1422167_at 1434776_at 1437422_at 1446772_at 1446865_at 1446910_at 1459109_at	1639	1.933	0.3621	Yes
36	KCTD15	1435339_at	1802	1.845	0.3607	Yes
37	PPRC1	1426381_at	1829	1.824	0.3655	Yes
38	PCSK1	1421396_at	1892	1.786	0.3686	Yes
39	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	1919	1.772	0.3732	Yes
40	SLBP	1430058_at 1460168_at	2015	1.713	0.3744	Yes
41	CDCA7	1428069_at 1445681_at	2034	1.706	0.3792	Yes
42	PRPS1	1416052_at	2163	1.639	0.3787	Yes
43	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2179	1.627	0.3834	Yes
44	AK2	1448450_at 1448451_at	2254	1.592	0.3852	Yes
45	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	2441	1.502	0.3816	No
46	RET	1421359_at	2630	1.426	0.3776	No
47	EPHB1	1455188_at	3253	1.242	0.3531	No
48	JPH1	1421520_at 1438428_at	3292	1.235	0.3554	No
49	ZIM2	1432297_at	3448	1.201	0.3523	No
50	E2F7	1437187_at	3452	1.200	0.3561	No
51	ANP32E	1420592_a_at 1447680_at	3510	1.184	0.3573	No
52	PAQR4	1423101_at	3598	1.166	0.3572	No
53	PKMYT1	1418481_at 1438601_at	3669	1.152	0.3577	No
54	SEZ6	1420885_a_at 1427674_a_at 1459972_x_at	3727	1.143	0.3589	No
55	ARHGEF17	1419938_s_at 1419939_at 1433682_at 1442357_at 1447441_at	3749	1.140	0.3616	No
56	SLITRK3	1439250_at	3755	1.139	0.3651	No
57	STMN1	1415849_s_at	4037	1.088	0.3558	No
58	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	4532	1.018	0.3365	No
59	DPYSL2	1433770_at 1450502_at 1458188_at 1458632_at	4572	1.013	0.3380	No
60	HNRPD	1425142_a_at 1446083_at	4634	1.006	0.3385	No
61	KLHDC3	1415991_a_at 1448164_at 1454747_a_at 1455910_at	4967	0.971	0.3264	No
62	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	5146	0.945	0.3213	No
63	HMGN2	1433507_a_at	5345	0.917	0.3153	No
64	MCM4	1416214_at 1436708_x_at	5554	0.888	0.3086	No
65	TREX2	1449367_at	5642	0.877	0.3075	No
66	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	5831	0.851	0.3017	No
67	ATAD2	1436174_at 1443146_at 1443229_at	5878	0.845	0.3023	No
68	RPL28	1416074_a_at	5976	0.835	0.3006	No
69	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	6042	0.827	0.3003	No
70	DCLRE1A	1417904_at 1432097_a_at 1442329_at	6153	0.810	0.2979	No
71	ANP32A	1421918_at 1434555_at 1450407_a_at	6185	0.806	0.2992	No
72	GLRA3	1450239_at	6638	0.752	0.2809	No
73	H2AFZ	1441370_at	6710	0.743	0.2800	No
74	AP4M1	1418846_at	6908	0.721	0.2734	No
75	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	6975	0.714	0.2727	No
76	CDC45L	1416575_at 1457838_at	7163	0.692	0.2663	No
77	E2F1	1417878_at 1431875_a_at 1447840_x_at	7270	0.679	0.2637	No
78	KCNA6	1421568_at 1441049_at 1456954_at	7455	0.656	0.2574	No
79	PRKCSH	1416339_a_at	8273	0.573	0.2217	No
80	E2F3	1427462_at 1434564_at	8495	0.550	0.2134	No
81	CACNA1G	1423365_at	8664	0.533	0.2074	No
82	KNTC1	1435575_at	8747	0.525	0.2054	No
83	PPP1R9B	1447247_at 1447486_at	8970	0.503	0.1968	No
84	VAMP3	1421102_a_at 1433693_x_at 1433916_at 1437708_x_at 1456245_x_at 1457391_at	9006	0.499	0.1969	No
85	RHD	1417049_at	9119	0.487	0.1933	No
86	FANCG	1420960_at	9432	0.458	0.1805	No
87	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9538	0.447	0.1771	No
88	PDGFRA	1421916_at 1421917_at 1438946_at	9680	0.432	0.1721	No
89	DMC1	1420335_at 1449819_at	9981	0.402	0.1596	No
90	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	9994	0.401	0.1604	No
91	RPS20	1456373_x_at 1456436_x_at	10099	0.392	0.1569	No
92	SLC16A2	1418446_at	10958	0.312	0.1185	No
93	DLL4	1421826_at 1421827_at	11073	0.302	0.1142	No
94	MAZ	1427099_at	11722	0.237	0.0852	No
95	REPS2	1435389_at 1446652_at	11837	0.224	0.0807	No
96	PEG3	1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at	12140	0.197	0.0675	No
97	PTMA	1423455_at	12741	0.143	0.0404	No
98	UFD1L	1418087_at 1432367_a_at	12816	0.136	0.0375	No
99	EVI1	1423011_at 1438325_at	12843	0.132	0.0367	No
100	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12893	0.127	0.0349	No
101	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	13153	0.100	0.0233	No
102	A2BP1	1418314_a_at 1438217_at 1447735_x_at 1455358_at 1456921_at	13219	0.092	0.0206	No
103	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	13322	0.079	0.0162	No
104	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	13400	0.071	0.0129	No
105	PHF15	1430081_at 1455345_at	13491	0.061	0.0089	No
106	IPO7	1442511_at 1454955_at 1458165_at	13657	0.044	0.0015	No
107	DDX17	1437773_x_at 1439037_at 1452155_a_at	14190	-0.015	-0.0229	No
108	PODN	1435180_at	14274	-0.025	-0.0266	No
109	RNF121	1426503_a_at 1426504_a_at	14460	-0.048	-0.0350	No
110	RFC1	1418342_at 1449050_at 1451920_a_at	14675	-0.076	-0.0445	No
111	SALL1	1450489_at	14738	-0.085	-0.0471	No
112	KLF5	1430255_at 1451021_a_at 1451739_at	15413	-0.177	-0.0775	No
113	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	15520	-0.193	-0.0817	No
114	KCND2	1422834_at 1422835_at 1446065_at 1447764_at 1450773_at 1459288_at	15580	-0.201	-0.0838	No
115	FMO4	1425799_at 1444852_at	15598	-0.204	-0.0839	No
116	PRIM1	1418369_at 1444544_at 1449061_a_at	15774	-0.230	-0.0912	No
117	FBXL20	1442464_at 1445575_at 1452826_s_at 1456378_s_at	15956	-0.265	-0.0986	No
118	PLK4	1419838_s_at 1426580_at 1452115_a_at	16050	-0.281	-0.1020	No
119	ZIC3	1423424_at 1438737_at	16355	-0.340	-0.1148	No
120	CASP8AP2	1449217_at	16514	-0.373	-0.1209	No
121	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16639	-0.402	-0.1252	No
122	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	16714	-0.426	-0.1272	No
123	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16974	-0.491	-0.1375	No
124	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	16977	-0.491	-0.1360	No
125	CDC25A	1417131_at 1417132_at 1445995_at	17039	-0.504	-0.1372	No
126	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	17099	-0.522	-0.1382	No
127	NUP153	1441689_at 1441733_s_at 1452176_at	17190	-0.545	-0.1405	No
128	APRIN	1435242_at 1436161_at 1441553_at	17326	-0.586	-0.1448	No
129	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	17408	-0.609	-0.1465	No
130	PLAGL1	1426208_x_at 1438588_at 1450533_a_at	17451	-0.622	-0.1464	No
131	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	17631	-0.682	-0.1524	No
132	PRKDC	1451576_at	17670	-0.693	-0.1518	No
133	EGLN2	1416533_at	17714	-0.704	-0.1515	No
134	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	17738	-0.710	-0.1502	No
135	DAXX	1419026_at	17806	-0.738	-0.1509	No
136	PPM1D	1434142_at 1449092_at 1459069_at	17915	-0.774	-0.1533	No
137	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	17999	-0.805	-0.1545	No
138	ADAMTS2	1435990_at 1455720_at 1457058_at	18037	-0.823	-0.1535	No
139	FBXO5	1429499_at	18355	-0.930	-0.1650	No
140	EZH2	1416544_at 1444263_at	18393	-0.943	-0.1636	No
141	CTDSP1	1452055_at	18685	-1.034	-0.1736	No
142	USP52	1426700_a_at	19020	-1.177	-0.1850	No
143	BRMS1L	1452850_s_at 1460443_at	19085	-1.203	-0.1840	No
144	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	19448	-1.408	-0.1960	No
145	HNRPA0	1428407_at	19725	-1.587	-0.2035	No
146	EIF5A	1437859_x_at 1451470_s_at	19803	-1.648	-0.2016	No
147	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19917	-1.734	-0.2011	No
148	CENPB	1426051_a_at 1435944_s_at	20098	-1.885	-0.2032	No
149	DDB2	1425706_a_at 1436680_s_at	20152	-1.933	-0.1993	No
150	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20185	-1.957	-0.1944	No
151	NR3C2	1435991_at 1440306_at 1442533_at	20226	-1.984	-0.1897	No
152	ZCCHC8	1423755_at 1441639_at	20345	-2.051	-0.1884	No
153	DLST	1423710_at 1430161_at 1431011_at 1437775_at	20381	-2.080	-0.1831	No
154	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	20497	-2.200	-0.1812	No
155	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20506	-2.207	-0.1743	No
156	CTCF	1418330_at 1449042_at	20645	-2.384	-0.1728	No
157	OSBPL7	1428893_at 1459966_at	20664	-2.402	-0.1658	No
158	PIM1	1423006_at 1435458_at	20778	-2.545	-0.1626	No
159	EIF4G2	1415863_at 1452758_s_at	20796	-2.567	-0.1550	No
160	SF4	1424381_at 1444699_at	20862	-2.683	-0.1491	No
161	NUTF2	1434367_s_at 1447440_at 1449017_at	21061	-3.032	-0.1483	No
162	STAG2	1421849_at 1450396_at	21067	-3.048	-0.1385	No
163	SLC25A11	1426586_at	21160	-3.255	-0.1321	No
164	RAB11B	1423448_at	21163	-3.275	-0.1214	No
165	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	21457	-4.191	-0.1211	No
166	HRBL	1425362_at 1437642_at 1441347_at	21460	-4.198	-0.1074	No
167	AXUD1	1434350_at	21608	-5.152	-0.0972	No
168	MCM3	1420029_at 1426653_at	21738	-6.271	-0.0826	No
169	TCP1	1442317_at 1448122_at	21742	-6.319	-0.0620	No
170	ARID4A	1436191_at 1438464_at 1456420_at	21755	-6.438	-0.0414	No
171	ID3	1416630_at	21832	-7.406	-0.0205	No
172	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	21861	-7.700	0.0034	No