Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | SCID |
GeneSet | V$E2F_02 |
Enrichment Score (ES) | 0.3568007 |
Normalized Enrichment Score (NES) | 1.4534045 |
Nominal p-value | 0.007518797 |
FDR q-value | 0.11314086 |
FWER p-Value | 0.951 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 154 | 5.273 | 0.0135 | Yes | ||
2 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 157 | 5.258 | 0.0339 | Yes | ||
3 | CDC6 | 1417019_a_at | 179 | 5.023 | 0.0525 | Yes | ||
4 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 182 | 5.000 | 0.0719 | Yes | ||
5 | GMNN | 1417506_at | 184 | 4.969 | 0.0912 | Yes | ||
6 | SNRPD1 | 1416336_s_at | 243 | 4.511 | 0.1062 | Yes | ||
7 | TLE3 | 1419654_at 1419655_at 1449554_at 1458512_at | 292 | 4.160 | 0.1202 | Yes | ||
8 | CLSPN | 1441984_at 1456280_at | 305 | 4.093 | 0.1356 | Yes | ||
9 | UNG | 1425753_a_at | 393 | 3.740 | 0.1462 | Yes | ||
10 | POLD1 | 1448187_at 1456055_x_at | 413 | 3.679 | 0.1596 | Yes | ||
11 | RANBP1 | 1422547_at | 490 | 3.453 | 0.1696 | Yes | ||
12 | RQCD1 | 1450887_at | 578 | 3.231 | 0.1782 | Yes | ||
13 | PHF5A | 1424170_at | 640 | 3.083 | 0.1874 | Yes | ||
14 | TOPBP1 | 1452241_at 1458480_at | 680 | 2.980 | 0.1973 | Yes | ||
15 | DNAJC9 | 1426473_at | 744 | 2.841 | 0.2054 | Yes | ||
16 | HMGA1 | 1416184_s_at | 769 | 2.805 | 0.2153 | Yes | ||
17 | MCM2 | 1434079_s_at 1448777_at | 864 | 2.652 | 0.2213 | Yes | ||
18 | MXD3 | 1422970_at 1438847_at 1448878_at | 880 | 2.625 | 0.2308 | Yes | ||
19 | YBX2 | 1420762_a_at | 914 | 2.565 | 0.2393 | Yes | ||
20 | ATF5 | 1425927_a_at | 927 | 2.543 | 0.2487 | Yes | ||
21 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 1096 | 2.321 | 0.2500 | Yes | ||
22 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 1113 | 2.307 | 0.2583 | Yes | ||
23 | SUV39H1 | 1427382_a_at 1432227_at 1432236_a_at | 1174 | 2.230 | 0.2642 | Yes | ||
24 | AP1S1 | 1416087_at | 1178 | 2.228 | 0.2728 | Yes | ||
25 | SLC9A5 | 1420070_a_at 1455760_at | 1189 | 2.218 | 0.2810 | Yes | ||
26 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 1200 | 2.206 | 0.2891 | Yes | ||
27 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1211 | 2.198 | 0.2972 | Yes | ||
28 | FKBP5 | 1416125_at 1447736_at 1448231_at 1458089_at | 1281 | 2.143 | 0.3024 | Yes | ||
29 | EIF4A1 | 1427058_at 1430980_a_at 1434985_a_at | 1288 | 2.138 | 0.3104 | Yes | ||
30 | MYC | 1424942_a_at | 1314 | 2.118 | 0.3176 | Yes | ||
31 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 1340 | 2.099 | 0.3246 | Yes | ||
32 | MRPL40 | 1448849_at | 1386 | 2.068 | 0.3306 | Yes | ||
33 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 1775 | 1.859 | 0.3200 | Yes | ||
34 | PCSK1 | 1421396_at | 1892 | 1.786 | 0.3217 | Yes | ||
35 | NELL2 | 1423560_at 1423561_at | 1955 | 1.755 | 0.3256 | Yes | ||
36 | SYNGR4 | 1418875_at | 2023 | 1.710 | 0.3292 | Yes | ||
37 | CDCA7 | 1428069_at 1445681_at | 2034 | 1.706 | 0.3354 | Yes | ||
38 | FANCD2 | 1430916_at 1438339_at 1439091_at 1442092_at | 2078 | 1.682 | 0.3400 | Yes | ||
39 | PRPS1 | 1416052_at | 2163 | 1.639 | 0.3425 | Yes | ||
40 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 2179 | 1.627 | 0.3482 | Yes | ||
41 | AK2 | 1448450_at 1448451_at | 2254 | 1.592 | 0.3510 | Yes | ||
42 | MAPT | 1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at | 2380 | 1.533 | 0.3512 | Yes | ||
43 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 2434 | 1.506 | 0.3547 | Yes | ||
44 | RET | 1421359_at | 2630 | 1.426 | 0.3513 | Yes | ||
45 | MCM8 | 1429557_at | 2690 | 1.405 | 0.3541 | Yes | ||
46 | MSH5 | 1430771_a_at 1449537_at | 2749 | 1.388 | 0.3568 | Yes | ||
47 | PB1 | 1426877_a_at 1426878_at 1427266_at 1442603_at | 3174 | 1.261 | 0.3422 | No | ||
48 | EPHB1 | 1455188_at | 3253 | 1.242 | 0.3435 | No | ||
49 | ZIM2 | 1432297_at | 3448 | 1.201 | 0.3393 | No | ||
50 | E2F7 | 1437187_at | 3452 | 1.200 | 0.3438 | No | ||
51 | ZBTB4 | 1429722_at 1460488_at | 3591 | 1.168 | 0.3420 | No | ||
52 | PAQR4 | 1423101_at | 3598 | 1.166 | 0.3463 | No | ||
53 | PKMYT1 | 1418481_at 1438601_at | 3669 | 1.152 | 0.3476 | No | ||
54 | FANCC | 1442265_at 1447632_at 1450861_at | 3977 | 1.099 | 0.3378 | No | ||
55 | STMN1 | 1415849_s_at | 4037 | 1.088 | 0.3393 | No | ||
56 | RTBDN | 1451603_at 1457331_at | 4440 | 1.027 | 0.3248 | No | ||
57 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 4532 | 1.018 | 0.3246 | No | ||
58 | POLE2 | 1427094_at 1431440_at | 4567 | 1.013 | 0.3270 | No | ||
59 | HNRPD | 1425142_a_at 1446083_at | 4634 | 1.006 | 0.3279 | No | ||
60 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 4848 | 0.983 | 0.3220 | No | ||
61 | DNAJC5G | 1437814_at | 5119 | 0.949 | 0.3133 | No | ||
62 | RASAL2 | 1436910_at 1444671_at | 5125 | 0.949 | 0.3167 | No | ||
63 | RBL1 | 1424156_at 1425166_at 1432604_at 1454293_at | 5146 | 0.945 | 0.3195 | No | ||
64 | STK35 | 1431107_at 1439802_at | 5291 | 0.925 | 0.3165 | No | ||
65 | KCNS2 | 1421342_at 1441211_at 1457325_at | 5474 | 0.899 | 0.3116 | No | ||
66 | MCM4 | 1416214_at 1436708_x_at | 5554 | 0.888 | 0.3115 | No | ||
67 | TMPO | 1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at | 5753 | 0.861 | 0.3057 | No | ||
68 | FHOD1 | 1435557_at | 5854 | 0.848 | 0.3045 | No | ||
69 | ATAD2 | 1436174_at 1443146_at 1443229_at | 5878 | 0.845 | 0.3067 | No | ||
70 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 6042 | 0.827 | 0.3024 | No | ||
71 | HS6ST3 | 1421599_at | 6063 | 0.824 | 0.3047 | No | ||
72 | TYRO3 | 1425248_a_at 1425249_a_at | 6450 | 0.774 | 0.2900 | No | ||
73 | CORT | 1449820_at | 6608 | 0.756 | 0.2857 | No | ||
74 | GLRA3 | 1450239_at | 6638 | 0.752 | 0.2873 | No | ||
75 | PCNA | 1417947_at | 6659 | 0.750 | 0.2894 | No | ||
76 | H2AFZ | 1441370_at | 6710 | 0.743 | 0.2900 | No | ||
77 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 6792 | 0.736 | 0.2891 | No | ||
78 | AP4M1 | 1418846_at | 6908 | 0.721 | 0.2866 | No | ||
79 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 6975 | 0.714 | 0.2864 | No | ||
80 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 7270 | 0.679 | 0.2755 | No | ||
81 | KCNA6 | 1421568_at 1441049_at 1456954_at | 7455 | 0.656 | 0.2696 | No | ||
82 | ILF3 | 1422546_at 1436802_at 1460669_at | 8047 | 0.595 | 0.2448 | No | ||
83 | E2F3 | 1427462_at 1434564_at | 8495 | 0.550 | 0.2264 | No | ||
84 | MYH10 | 1441057_at 1452740_at | 8520 | 0.547 | 0.2275 | No | ||
85 | SEMA6A | 1421414_a_at 1425903_at 1436458_at | 8666 | 0.533 | 0.2229 | No | ||
86 | CBX3 | 1432628_at 1454305_at | 8818 | 0.519 | 0.2180 | No | ||
87 | FANCG | 1420960_at | 9432 | 0.458 | 0.1916 | No | ||
88 | GRIA4 | 1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at | 9538 | 0.447 | 0.1885 | No | ||
89 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 9868 | 0.416 | 0.1750 | No | ||
90 | RPS20 | 1456373_x_at 1456436_x_at | 10099 | 0.392 | 0.1660 | No | ||
91 | GABRB3 | 1421189_at 1421190_at 1435021_at | 10710 | 0.335 | 0.1393 | No | ||
92 | SOAT1 | 1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at | 11491 | 0.262 | 0.1045 | No | ||
93 | MAZ | 1427099_at | 11722 | 0.237 | 0.0948 | No | ||
94 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 11955 | 0.213 | 0.0850 | No | ||
95 | NRK | 1436399_s_at 1450078_at 1450079_at | 12087 | 0.201 | 0.0798 | No | ||
96 | PEG3 | 1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at | 12140 | 0.197 | 0.0782 | No | ||
97 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 12145 | 0.196 | 0.0788 | No | ||
98 | HOXC10 | 1439798_at | 12216 | 0.190 | 0.0763 | No | ||
99 | PAX6 | 1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at | 12224 | 0.189 | 0.0767 | No | ||
100 | ARHGAP11A | 1438434_at | 12675 | 0.148 | 0.0566 | No | ||
101 | PTMA | 1423455_at | 12741 | 0.143 | 0.0542 | No | ||
102 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 12893 | 0.127 | 0.0477 | No | ||
103 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 13153 | 0.100 | 0.0362 | No | ||
104 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 13424 | 0.068 | 0.0241 | No | ||
105 | PHF15 | 1430081_at 1455345_at | 13491 | 0.061 | 0.0213 | No | ||
106 | ACBD6 | 1452601_a_at 1453199_at | 13586 | 0.050 | 0.0172 | No | ||
107 | IPO7 | 1442511_at 1454955_at 1458165_at | 13657 | 0.044 | 0.0141 | No | ||
108 | POU4F1 | 1429667_at 1429668_at | 13756 | 0.033 | 0.0098 | No | ||
109 | MAP3K7 | 1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at | 14013 | 0.005 | -0.0020 | No | ||
110 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 14134 | -0.009 | -0.0075 | No | ||
111 | PODN | 1435180_at | 14274 | -0.025 | -0.0137 | No | ||
112 | PRPS2 | 1420637_at 1420638_at 1443418_at 1454843_at | 15456 | -0.184 | -0.0673 | No | ||
113 | MSH2 | 1416988_at 1447888_x_at | 15547 | -0.196 | -0.0706 | No | ||
114 | FMO4 | 1425799_at 1444852_at | 15598 | -0.204 | -0.0721 | No | ||
115 | CASP8AP2 | 1449217_at | 16514 | -0.373 | -0.1127 | No | ||
116 | GSPT1 | 1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at | 16648 | -0.405 | -0.1172 | No | ||
117 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 16974 | -0.491 | -0.1302 | No | ||
118 | CDC25A | 1417131_at 1417132_at 1445995_at | 17039 | -0.504 | -0.1312 | No | ||
119 | RPS6KA5 | 1431050_at 1437625_at 1439004_at 1440343_at | 17099 | -0.522 | -0.1319 | No | ||
120 | MAPK6 | 1419168_at 1419169_at 1429963_at 1459146_at | 17138 | -0.530 | -0.1316 | No | ||
121 | GPRC5B | 1424613_at 1451411_at | 17285 | -0.575 | -0.1360 | No | ||
122 | PLAGL1 | 1426208_x_at 1438588_at 1450533_a_at | 17451 | -0.622 | -0.1412 | No | ||
123 | GATA1 | 1449232_at | 17513 | -0.648 | -0.1415 | No | ||
124 | PRKDC | 1451576_at | 17670 | -0.693 | -0.1459 | No | ||
125 | CCNT1 | 1419313_at 1456477_at | 17749 | -0.716 | -0.1467 | No | ||
126 | EED | 1448653_at | 17850 | -0.755 | -0.1484 | No | ||
127 | PPM1D | 1434142_at 1449092_at 1459069_at | 17915 | -0.774 | -0.1483 | No | ||
128 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 18037 | -0.823 | -0.1506 | No | ||
129 | HCN3 | 1451023_at | 18115 | -0.847 | -0.1509 | No | ||
130 | PPIG | 1434475_at 1435341_at 1436505_at | 18167 | -0.869 | -0.1498 | No | ||
131 | FBXO5 | 1429499_at | 18355 | -0.930 | -0.1548 | No | ||
132 | EZH2 | 1416544_at 1444263_at | 18393 | -0.943 | -0.1528 | No | ||
133 | USP37 | 1434242_at 1438212_at | 18578 | -1.001 | -0.1573 | No | ||
134 | USP52 | 1426700_a_at | 19020 | -1.177 | -0.1730 | No | ||
135 | BRMS1L | 1452850_s_at 1460443_at | 19085 | -1.203 | -0.1713 | No | ||
136 | PHC1 | 1423212_at | 19196 | -1.261 | -0.1714 | No | ||
137 | TBX6 | 1449868_at | 19330 | -1.339 | -0.1723 | No | ||
138 | ALDH6A1 | 1448104_at | 19447 | -1.406 | -0.1721 | No | ||
139 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 19448 | -1.408 | -0.1666 | No | ||
140 | H2AFV | 1428029_a_at 1436596_at | 19457 | -1.415 | -0.1615 | No | ||
141 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 19505 | -1.448 | -0.1580 | No | ||
142 | HNRPA2B1 | 1420365_a_at 1433829_a_at 1433830_at 1434047_x_at | 19519 | -1.461 | -0.1529 | No | ||
143 | HNRPUL1 | 1451984_at | 19530 | -1.468 | -0.1476 | No | ||
144 | BRPF1 | 1460402_at | 19704 | -1.575 | -0.1494 | No | ||
145 | SUMO1 | 1438289_a_at 1444557_at 1451005_at 1456349_x_at | 19865 | -1.693 | -0.1502 | No | ||
146 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 20178 | -1.953 | -0.1569 | No | ||
147 | STAG1 | 1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at | 20185 | -1.957 | -0.1495 | No | ||
148 | IL4I1 | 1419192_at | 20344 | -2.050 | -0.1488 | No | ||
149 | ZCCHC8 | 1423755_at 1441639_at | 20345 | -2.051 | -0.1408 | No | ||
150 | SLCO3A1 | 1418030_at 1434537_at 1448918_at | 20495 | -2.198 | -0.1391 | No | ||
151 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 20497 | -2.200 | -0.1306 | No | ||
152 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 20506 | -2.207 | -0.1223 | No | ||
153 | PIM1 | 1423006_at 1435458_at | 20778 | -2.545 | -0.1248 | No | ||
154 | CDC5L | 1428092_at 1460429_at | 20816 | -2.608 | -0.1164 | No | ||
155 | SP3 | 1431804_a_at 1459360_at | 21004 | -2.910 | -0.1136 | No | ||
156 | STAG2 | 1421849_at 1450396_at | 21067 | -3.048 | -0.1046 | No | ||
157 | TRIM39 | 1418851_at | 21349 | -3.809 | -0.1026 | No | ||
158 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21590 | -5.042 | -0.0940 | No | ||
159 | MCM3 | 1420029_at 1426653_at | 21738 | -6.271 | -0.0763 | No | ||
160 | ARID4A | 1436191_at 1438464_at 1456420_at | 21755 | -6.438 | -0.0519 | No | ||
161 | ID3 | 1416630_at | 21832 | -7.406 | -0.0265 | No | ||
162 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 21911 | -8.023 | 0.0011 | No |