Details for gene set V$E2F1_Q6

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	V$E2F1_Q6_01
Enrichment Score (ES)	0.39290863
Normalized Enrichment Score (NES)	1.625036
Nominal p-value	0.0
FDR q-value	0.09151127
FWER p-Value	0.369

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HNRPA1	1423531_a_at 1430020_x_at 1436549_a_at 1442758_at 1446038_at 1455305_x_at 1455740_at	26	7.887	0.0295	Yes
2	NOLC1	1428869_at 1428870_at 1450087_a_at	157	5.258	0.0440	Yes
3	ESPL1	1433862_at	169	5.101	0.0633	Yes
4	MCM6	1416251_at 1438852_x_at 1447756_x_at	182	5.000	0.0822	Yes
5	GMNN	1417506_at	184	4.969	0.1015	Yes
6	RAD51	1418281_at	198	4.831	0.1197	Yes
7	CLSPN	1441984_at 1456280_at	305	4.093	0.1308	Yes
8	ATP5G2	1415980_at 1456128_at	325	3.967	0.1453	Yes
9	UNG	1425753_a_at	393	3.740	0.1568	Yes
10	RANBP1	1422547_at	490	3.453	0.1658	Yes
11	RQCD1	1450887_at	578	3.231	0.1744	Yes
12	PHF5A	1424170_at	640	3.083	0.1836	Yes
13	TOPBP1	1452241_at 1458480_at	680	2.980	0.1934	Yes
14	AMD1	1448484_at	727	2.884	0.2025	Yes
15	DNAJC9	1426473_at	744	2.841	0.2128	Yes
16	UXT	1418986_a_at	817	2.729	0.2202	Yes
17	MCM2	1434079_s_at 1448777_at	864	2.652	0.2284	Yes
18	MXD3	1422970_at 1438847_at 1448878_at	880	2.625	0.2379	Yes
19	YBX2	1420762_a_at	914	2.565	0.2464	Yes
20	ORC1L	1422663_at 1443172_at	950	2.513	0.2545	Yes
21	WEE1	1416773_at 1416774_at	973	2.481	0.2632	Yes
22	FAF1	1418242_at 1434370_s_at	1044	2.397	0.2693	Yes
23	ACO2	1436934_s_at 1442102_at 1451002_at	1096	2.321	0.2760	Yes
24	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1113	2.307	0.2842	Yes
25	POLA2	1425794_at 1448369_at 1456713_at	1163	2.239	0.2907	Yes
26	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	1174	2.230	0.2989	Yes
27	AP1S1	1416087_at	1178	2.228	0.3074	Yes
28	SLC9A5	1420070_a_at 1455760_at	1189	2.218	0.3156	Yes
29	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	1200	2.206	0.3237	Yes
30	RPS19	1449243_a_at 1460442_at	1241	2.174	0.3303	Yes
31	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	1281	2.143	0.3369	Yes
32	MYC	1424942_a_at	1314	2.118	0.3437	Yes
33	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	1340	2.099	0.3507	Yes
34	MRPL40	1448849_at	1386	2.068	0.3566	Yes
35	SLC25A1	1428190_at	1501	2.001	0.3592	Yes
36	ATM	1421205_at 1428830_at	1733	1.883	0.3559	Yes
37	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	1775	1.859	0.3613	Yes
38	PPRC1	1426381_at	1829	1.824	0.3659	Yes
39	RPL18	1437005_a_at 1450372_a_at	1852	1.809	0.3720	Yes
40	PCSK1	1421396_at	1892	1.786	0.3771	Yes
41	SYNGR4	1418875_at	2023	1.710	0.3778	Yes
42	CDCA7	1428069_at 1445681_at	2034	1.706	0.3840	Yes
43	PRPS1	1416052_at	2163	1.639	0.3845	Yes
44	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2179	1.627	0.3901	Yes
45	AK2	1448450_at 1448451_at	2254	1.592	0.3929	Yes
46	DNAJC11	1433880_at 1433881_at 1439763_at 1446686_at 1447055_at	2441	1.502	0.3902	No
47	MCM8	1429557_at	2690	1.405	0.3843	No
48	JPH1	1421520_at 1438428_at	3292	1.235	0.3615	No
49	DHH	1422127_at 1434959_at	3497	1.187	0.3567	No
50	LRP1	1442849_at 1448655_at	3568	1.173	0.3581	No
51	PAQR4	1423101_at	3598	1.166	0.3613	No
52	PKMYT1	1418481_at 1438601_at	3669	1.152	0.3625	No
53	FANCC	1442265_at 1447632_at 1450861_at	3977	1.099	0.3527	No
54	STMN1	1415849_s_at	4037	1.088	0.3542	No
55	INSM1	1421399_at 1455865_at	4319	1.043	0.3454	No
56	SYT6	1420188_at 1426106_a_at 1449766_at 1449767_x_at	4467	1.024	0.3426	No
57	ENPP1	1419276_at 1459546_s_at	4549	1.015	0.3428	No
58	POLE2	1427094_at 1431440_at	4567	1.013	0.3460	No
59	HNRPD	1425142_a_at 1446083_at	4634	1.006	0.3469	No
60	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	4719	0.999	0.3469	No
61	ERF	1422114_at 1435561_at	5026	0.962	0.3366	No
62	FZD1	1422985_at 1437284_at	5075	0.955	0.3381	No
63	DNAJC5G	1437814_at	5119	0.949	0.3398	No
64	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	5146	0.945	0.3423	No
65	STK35	1431107_at 1439802_at	5291	0.925	0.3393	No
66	HMGN2	1433507_a_at	5345	0.917	0.3404	No
67	RB1CC1	1418968_at 1431605_at 1449292_at	5386	0.911	0.3421	No
68	KCNS2	1421342_at 1441211_at 1457325_at	5474	0.899	0.3416	No
69	MCM4	1416214_at 1436708_x_at	5554	0.888	0.3415	No
70	NUMA1	1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at	5696	0.870	0.3384	No
71	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	5753	0.861	0.3392	No
72	FHOD1	1435557_at	5854	0.848	0.3379	No
73	ATAD2	1436174_at 1443146_at 1443229_at	5878	0.845	0.3401	No
74	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	6042	0.827	0.3358	No
75	TYRO3	1425248_a_at 1425249_a_at	6450	0.774	0.3201	No
76	PCNA	1417947_at	6659	0.750	0.3135	No
77	RAVER1	1427110_at 1427111_s_at 1444966_at	6792	0.736	0.3103	No
78	HR	1422110_at 1435950_at	6863	0.726	0.3099	No
79	AP4M1	1418846_at	6908	0.721	0.3107	No
80	CDC45L	1416575_at 1457838_at	7163	0.692	0.3017	No
81	E2F1	1417878_at 1431875_a_at 1447840_x_at	7270	0.679	0.2995	No
82	CASP2	1448165_at	8017	0.598	0.2675	No
83	ILF3	1422546_at 1436802_at 1460669_at	8047	0.595	0.2685	No
84	NPAT	1456485_at 1459185_at	8393	0.560	0.2548	No
85	E2F3	1427462_at 1434564_at	8495	0.550	0.2523	No
86	MYH10	1441057_at 1452740_at	8520	0.547	0.2534	No
87	GNG4	1417943_at 1417944_at 1447669_s_at	9082	0.491	0.2295	No
88	TNF	1419607_at	9219	0.478	0.2251	No
89	HMGA2	1422851_at 1443394_at 1446196_at 1450780_s_at 1450781_at 1458241_at	9358	0.465	0.2206	No
90	FANCG	1420960_at	9432	0.458	0.2190	No
91	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	9868	0.416	0.2007	No
92	IRX3	1418517_at	10236	0.379	0.1853	No
93	BMP2	1423635_at	10353	0.369	0.1814	No
94	CNOT3	1435965_at 1441465_at	11173	0.294	0.1449	No
95	MAZ	1427099_at	11722	0.237	0.1206	No
96	REPS2	1435389_at 1446652_at	11837	0.224	0.1163	No
97	HNRPR	1427129_a_at 1438807_at 1452030_a_at	12145	0.196	0.1029	No
98	HOXC10	1439798_at	12216	0.190	0.1005	No
99	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	12224	0.189	0.1009	No
100	POU2F1	1419716_a_at 1427695_a_at 1427835_at	12497	0.165	0.0890	No
101	ARHGAP11A	1438434_at	12675	0.148	0.0815	No
102	PTMA	1423455_at	12741	0.143	0.0790	No
103	UFD1L	1418087_at 1432367_a_at	12816	0.136	0.0762	No
104	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12893	0.127	0.0732	No
105	SP1	1418180_at 1448994_at 1454852_at	13186	0.095	0.0601	No
106	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	13298	0.082	0.0553	No
107	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	13400	0.071	0.0510	No
108	PHF15	1430081_at 1455345_at	13491	0.061	0.0471	No
109	ACBD6	1452601_a_at 1453199_at	13586	0.050	0.0429	No
110	IPO7	1442511_at 1454955_at 1458165_at	13657	0.044	0.0399	No
111	PCDH10	1421311_at 1425563_s_at 1430667_at 1438134_at 1442565_at 1444301_at	13755	0.033	0.0356	No
112	USP2	1417168_a_at 1417169_at	13938	0.014	0.0273	No
113	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	14132	-0.009	0.0184	No
114	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14134	-0.009	0.0184	No
115	DDX17	1437773_x_at 1439037_at 1452155_a_at	14190	-0.015	0.0159	No
116	PODN	1435180_at	14274	-0.025	0.0122	No
117	TMEM15	1424366_at	15285	-0.157	-0.0336	No
118	KLF5	1430255_at 1451021_a_at 1451739_at	15413	-0.177	-0.0387	No
119	MSH2	1416988_at 1447888_x_at	15547	-0.196	-0.0441	No
120	GADD45B	1420197_at 1449773_s_at 1450971_at	15729	-0.221	-0.0515	No
121	ACTN3	1418677_at	16118	-0.294	-0.0682	No
122	CASP8AP2	1449217_at	16514	-0.373	-0.0849	No
123	PHF13	1455175_at	16607	-0.393	-0.0876	No
124	WHSC1L1	1442085_at 1447931_at 1455668_at 1457630_at 1457793_a_at 1457794_at 1459907_a_at	16639	-0.402	-0.0875	No
125	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	16648	-0.405	-0.0862	No
126	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	16714	-0.426	-0.0876	No
127	SMARCA1	1460292_a_at	16790	-0.441	-0.0893	No
128	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16974	-0.491	-0.0958	No
129	CDC25A	1417131_at 1417132_at 1445995_at	17039	-0.504	-0.0968	No
130	DLEU2	1427410_at 1427411_s_at 1456145_at	17128	-0.527	-0.0988	No
131	GPRC5B	1424613_at 1451411_at	17285	-0.575	-0.1037	No
132	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	17408	-0.609	-0.1069	No
133	GATA1	1449232_at	17513	-0.648	-0.1092	No
134	PRKDC	1451576_at	17670	-0.693	-0.1137	No
135	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	17738	-0.710	-0.1140	No
136	CCNT1	1419313_at 1456477_at	17749	-0.716	-0.1116	No
137	EED	1448653_at	17850	-0.755	-0.1133	No
138	PPM1D	1434142_at 1449092_at 1459069_at	17915	-0.774	-0.1132	No
139	ADAMTS2	1435990_at 1455720_at 1457058_at	18037	-0.823	-0.1156	No
140	HCN3	1451023_at	18115	-0.847	-0.1158	No
141	FBXO5	1429499_at	18355	-0.930	-0.1232	No
142	EZH2	1416544_at 1444263_at	18393	-0.943	-0.1212	No
143	USP37	1434242_at 1438212_at	18578	-1.001	-0.1258	No
144	MGAT2	1426350_at 1452037_at	18641	-1.022	-0.1247	No
145	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	18766	-1.066	-0.1262	No
146	CHD4	1436343_at 1438476_a_at 1451295_a_at	18887	-1.114	-0.1274	No
147	USP52	1426700_a_at	19020	-1.177	-0.1289	No
148	TCF8	1418926_at 1420243_at 1443005_at 1443203_at 1446127_at 1456686_at	19055	-1.192	-0.1258	No
149	BRMS1L	1452850_s_at 1460443_at	19085	-1.203	-0.1224	No
150	SPHK2	1417431_a_at 1426230_at	19206	-1.266	-0.1230	No
151	TBX6	1449868_at	19330	-1.339	-0.1235	No
152	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	19448	-1.408	-0.1234	No
153	HNRPUL1	1451984_at	19530	-1.468	-0.1214	No
154	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	19865	-1.693	-0.1301	No
155	SIN3A	1419101_at 1419102_at 1419900_at 1449343_s_at	20139	-1.923	-0.1352	No
156	DDB2	1425706_a_at 1436680_s_at	20152	-1.933	-0.1282	No
157	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20185	-1.957	-0.1221	No
158	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	20497	-2.200	-0.1278	No
159	FLI1	1422024_at 1433512_at 1441584_at	20634	-2.375	-0.1248	No
160	CTCF	1418330_at 1449042_at	20645	-2.384	-0.1160	No
161	MTSS1	1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at	20660	-2.399	-0.1073	No
162	CDC5L	1428092_at 1460429_at	20816	-2.608	-0.1043	No
163	PIK3CD	1422991_at 1422992_s_at 1443798_at 1453281_at 1458321_at	20915	-2.748	-0.0981	No
164	STAG2	1421849_at 1450396_at	21067	-3.048	-0.0932	No
165	RAB11B	1423448_at	21163	-3.275	-0.0848	No
166	NCOA6	1423374_at	21314	-3.672	-0.0774	No
167	TRIM39	1418851_at	21349	-3.809	-0.0641	No
168	PPP1R8	1424554_at 1435821_s_at	21545	-4.639	-0.0550	No
169	KBTBD7	1428192_at 1439865_at 1452700_s_at	21590	-5.042	-0.0374	No
170	MCM3	1420029_at 1426653_at	21738	-6.271	-0.0198	No
171	ID3	1416630_at	21832	-7.406	0.0048	No