Details for gene set V$E2F1

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	V$E2F1_Q6
Enrichment Score (ES)	0.36856946
Normalized Enrichment Score (NES)	1.5195324
Nominal p-value	0.0
FDR q-value	0.09541271
FWER p-Value	0.775

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDT1	1424143_a_at 1424144_at 1455791_at	87	6.599	0.0214	Yes
2	POLR2A	1422311_a_at 1426242_at 1458710_at	154	5.273	0.0386	Yes
3	NOLC1	1428869_at 1428870_at 1450087_a_at	157	5.258	0.0587	Yes
4	CDC6	1417019_a_at	179	5.023	0.0770	Yes
5	MCM6	1416251_at 1438852_x_at 1447756_x_at	182	5.000	0.0961	Yes
6	GMNN	1417506_at	184	4.969	0.1152	Yes
7	SNRPD1	1416336_s_at	243	4.511	0.1299	Yes
8	CLSPN	1441984_at 1456280_at	305	4.093	0.1428	Yes
9	UNG	1425753_a_at	393	3.740	0.1532	Yes
10	POLD1	1448187_at 1456055_x_at	413	3.679	0.1664	Yes
11	RANBP1	1422547_at	490	3.453	0.1762	Yes
12	RQCD1	1450887_at	578	3.231	0.1846	Yes
13	PHF5A	1424170_at	640	3.083	0.1937	Yes
14	TOPBP1	1452241_at 1458480_at	680	2.980	0.2033	Yes
15	DNAJC9	1426473_at	744	2.841	0.2113	Yes
16	HMGA1	1416184_s_at	769	2.805	0.2210	Yes
17	MCM2	1434079_s_at 1448777_at	864	2.652	0.2269	Yes
18	MXD3	1422970_at 1438847_at 1448878_at	880	2.625	0.2363	Yes
19	YBX2	1420762_a_at	914	2.565	0.2446	Yes
20	ATF5	1425927_a_at	927	2.543	0.2538	Yes
21	ORC1L	1422663_at 1443172_at	950	2.513	0.2625	Yes
22	ACO2	1436934_s_at 1442102_at 1451002_at	1096	2.321	0.2647	Yes
23	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1113	2.307	0.2729	Yes
24	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	1174	2.230	0.2787	Yes
25	AP1S1	1416087_at	1178	2.228	0.2871	Yes
26	SLC9A5	1420070_a_at 1455760_at	1189	2.218	0.2952	Yes
27	HIRA	1436241_s_at 1450049_a_at 1450050_at 1459103_at	1200	2.206	0.3032	Yes
28	POLE4	1423371_at 1423372_at 1432286_at 1444739_at	1211	2.198	0.3112	Yes
29	FKBP5	1416125_at 1447736_at 1448231_at 1458089_at	1281	2.143	0.3162	Yes
30	MYC	1424942_a_at	1314	2.118	0.3229	Yes
31	POLD3	1426838_at 1426839_at 1443733_x_at 1459647_at	1340	2.099	0.3298	Yes
32	MRPL40	1448849_at	1386	2.068	0.3357	Yes
33	NCL	1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at	1775	1.859	0.3250	Yes
34	PCSK1	1421396_at	1892	1.786	0.3265	Yes
35	PVRL1	1438111_at 1438421_at 1440131_at 1446488_at 1450819_at	1919	1.772	0.3322	Yes
36	NELL2	1423560_at 1423561_at	1955	1.755	0.3373	Yes
37	SYNGR4	1418875_at	2023	1.710	0.3408	Yes
38	CDCA7	1428069_at 1445681_at	2034	1.706	0.3469	Yes
39	FANCD2	1430916_at 1438339_at 1439091_at 1442092_at	2078	1.682	0.3514	Yes
40	SLC25A3	1416300_a_at 1440302_at	2088	1.675	0.3574	Yes
41	PRPS1	1416052_at	2163	1.639	0.3603	Yes
42	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	2179	1.627	0.3659	Yes
43	AK2	1448450_at 1448451_at	2254	1.592	0.3686	Yes
44	RRM2	1416120_at 1434437_x_at 1448226_at	2434	1.506	0.3661	No
45	MCM8	1429557_at	2690	1.405	0.3598	No
46	MSH5	1430771_a_at 1449537_at	2749	1.388	0.3625	No
47	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	3174	1.261	0.3479	No
48	EPHB1	1455188_at	3253	1.242	0.3490	No
49	E2F7	1437187_at	3452	1.200	0.3446	No
50	ZBTB4	1429722_at 1460488_at	3591	1.168	0.3427	No
51	PAQR4	1423101_at	3598	1.166	0.3469	No
52	PKMYT1	1418481_at 1438601_at	3669	1.152	0.3481	No
53	FANCC	1442265_at 1447632_at 1450861_at	3977	1.099	0.3383	No
54	STMN1	1415849_s_at	4037	1.088	0.3397	No
55	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	4532	1.018	0.3209	No
56	POLE2	1427094_at 1431440_at	4567	1.013	0.3233	No
57	HNRPD	1425142_a_at 1446083_at	4634	1.006	0.3241	No
58	ERBB2IP	1428011_a_at 1439079_a_at 1439080_at 1439638_at 1440573_at	4719	0.999	0.3241	No
59	SFRS7	1424033_at 1424883_s_at 1436871_at	4848	0.983	0.3220	No
60	DNAJC5G	1437814_at	5119	0.949	0.3132	No
61	RASAL2	1436910_at 1444671_at	5125	0.949	0.3167	No
62	RBL1	1424156_at 1425166_at 1432604_at 1454293_at	5146	0.945	0.3194	No
63	STK35	1431107_at 1439802_at	5291	0.925	0.3163	No
64	KCNS2	1421342_at 1441211_at 1457325_at	5474	0.899	0.3114	No
65	MCM4	1416214_at 1436708_x_at	5554	0.888	0.3112	No
66	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	5753	0.861	0.3054	No
67	FHOD1	1435557_at	5854	0.848	0.3041	No
68	ATAD2	1436174_at 1443146_at 1443229_at	5878	0.845	0.3063	No
69	HTF9C	1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at	6042	0.827	0.3019	No
70	HS6ST3	1421599_at	6063	0.824	0.3042	No
71	TYRO3	1425248_a_at 1425249_a_at	6450	0.774	0.2894	No
72	CORT	1449820_at	6608	0.756	0.2851	No
73	PCNA	1417947_at	6659	0.750	0.2857	No
74	H2AFZ	1441370_at	6710	0.743	0.2863	No
75	RAVER1	1427110_at 1427111_s_at 1444966_at	6792	0.736	0.2854	No
76	AP4M1	1418846_at	6908	0.721	0.2829	No
77	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	6975	0.714	0.2826	No
78	E2F1	1417878_at 1431875_a_at 1447840_x_at	7270	0.679	0.2717	No
79	KCNA6	1421568_at 1441049_at 1456954_at	7455	0.656	0.2658	No
80	ILF3	1422546_at 1436802_at 1460669_at	8047	0.595	0.2409	No
81	E2F3	1427462_at 1434564_at	8495	0.550	0.2225	No
82	MYH10	1441057_at 1452740_at	8520	0.547	0.2235	No
83	CACNA1G	1423365_at	8664	0.533	0.2190	No
84	SEMA6A	1421414_a_at 1425903_at 1436458_at	8666	0.533	0.2210	No
85	CBX3	1432628_at 1454305_at	8818	0.519	0.2160	No
86	FANCG	1420960_at	9432	0.458	0.1896	No
87	GRIA4	1421351_at 1435722_at 1436772_at 1440891_at 1443285_at 1458230_at 1460097_at	9538	0.447	0.1865	No
88	EFNA5	1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at	9868	0.416	0.1730	No
89	RPS20	1456373_x_at 1456436_x_at	10099	0.392	0.1640	No
90	GABRB3	1421189_at 1421190_at 1435021_at	10710	0.335	0.1372	No
91	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11491	0.262	0.1024	No
92	MAZ	1427099_at	11722	0.237	0.0928	No
93	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	11955	0.213	0.0829	No
94	NRK	1436399_s_at 1450078_at 1450079_at	12087	0.201	0.0777	No
95	HNRPR	1427129_a_at 1438807_at 1452030_a_at	12145	0.196	0.0758	No
96	HOXC10	1439798_at	12216	0.190	0.0733	No
97	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	12224	0.189	0.0737	No
98	ARHGAP11A	1438434_at	12675	0.148	0.0536	No
99	ARHGAP6	1417704_a_at 1451867_x_at 1456333_a_at	12893	0.127	0.0442	No
100	CTNND2	1422592_at 1438891_at 1443638_at 1445114_at 1447552_s_at 1456116_at	13298	0.082	0.0259	No
101	RBBP4	1434892_x_at 1442443_at 1454791_a_at 1454875_a_at 1456260_at	13322	0.079	0.0252	No
102	CSPG2	1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at	13424	0.068	0.0208	No
103	PHF15	1430081_at 1455345_at	13491	0.061	0.0180	No
104	ACBD6	1452601_a_at 1453199_at	13586	0.050	0.0139	No
105	IPO7	1442511_at 1454955_at 1458165_at	13657	0.044	0.0108	No
106	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	14013	0.005	-0.0055	No
107	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14134	-0.009	-0.0109	No
108	PODN	1435180_at	14274	-0.025	-0.0172	No
109	SALL1	1450489_at	14738	-0.085	-0.0382	No
110	KLF5	1430255_at 1451021_a_at 1451739_at	15413	-0.177	-0.0684	No
111	PRPS2	1420637_at 1420638_at 1443418_at 1454843_at	15456	-0.184	-0.0697	No
112	MSH2	1416988_at 1447888_x_at	15547	-0.196	-0.0731	No
113	FMO4	1425799_at 1444852_at	15598	-0.204	-0.0746	No
114	CASP8AP2	1449217_at	16514	-0.373	-0.1152	No
115	PHF13	1455175_at	16607	-0.393	-0.1179	No
116	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	16648	-0.405	-0.1181	No
117	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16974	-0.491	-0.1312	No
118	CDC25A	1417131_at 1417132_at 1445995_at	17039	-0.504	-0.1322	No
119	KPNB1	1416925_at 1434357_a_at 1448526_at 1451967_x_at	17098	-0.521	-0.1329	No
120	RPS6KA5	1431050_at 1437625_at 1439004_at 1440343_at	17099	-0.522	-0.1308	No
121	GPRC5B	1424613_at 1451411_at	17285	-0.575	-0.1371	No
122	ATE1	1420036_at 1420651_at 1420652_at 1435173_at 1446611_at 1449709_s_at	17408	-0.609	-0.1404	No
123	GATA1	1449232_at	17513	-0.648	-0.1427	No
124	PRKDC	1451576_at	17670	-0.693	-0.1472	No
125	CCNT1	1419313_at 1456477_at	17749	-0.716	-0.1480	No
126	EED	1448653_at	17850	-0.755	-0.1497	No
127	PPM1D	1434142_at 1449092_at 1459069_at	17915	-0.774	-0.1497	No
128	ADAMTS2	1435990_at 1455720_at 1457058_at	18037	-0.823	-0.1521	No
129	HCN3	1451023_at	18115	-0.847	-0.1523	No
130	FBXO5	1429499_at	18355	-0.930	-0.1598	No
131	EZH2	1416544_at 1444263_at	18393	-0.943	-0.1578	No
132	USP37	1434242_at 1438212_at	18578	-1.001	-0.1624	No
133	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	18766	-1.066	-0.1669	No
134	USP52	1426700_a_at	19020	-1.177	-0.1740	No
135	BRMS1L	1452850_s_at 1460443_at	19085	-1.203	-0.1723	No
136	PHC1	1423212_at	19196	-1.261	-0.1725	No
137	TBX6	1449868_at	19330	-1.339	-0.1735	No
138	ALDH6A1	1448104_at	19447	-1.406	-0.1734	No
139	ASXL2	1439063_at 1444754_at 1453295_at 1458366_at 1460597_at	19448	-1.408	-0.1680	No
140	H2AFV	1428029_a_at 1436596_at	19457	-1.415	-0.1630	No
141	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	19505	-1.448	-0.1596	No
142	HNRPA2B1	1420365_a_at 1433829_a_at 1433830_at 1434047_x_at	19519	-1.461	-0.1545	No
143	HNRPUL1	1451984_at	19530	-1.468	-0.1494	No
144	SUMO1	1438289_a_at 1444557_at 1451005_at 1456349_x_at	19865	-1.693	-0.1582	No
145	UGCGL1	1432318_at 1448009_at 1455839_at	20178	-1.953	-0.1650	No
146	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20185	-1.957	-0.1578	No
147	SSBP3	1425940_a_at 1427917_s_at 1439136_at 1443554_at 1457560_at 1458749_at	20315	-2.037	-0.1559	No
148	IL4I1	1419192_at	20344	-2.050	-0.1493	No
149	ZCCHC8	1423755_at 1441639_at	20345	-2.051	-0.1414	No
150	SLCO3A1	1418030_at 1434537_at 1448918_at	20495	-2.198	-0.1398	No
151	DNMT1	1422946_a_at 1435122_x_at 1445637_at 1447877_x_at	20497	-2.200	-0.1314	No
152	DCK	1428838_a_at 1439012_a_at 1449176_a_at	20506	-2.207	-0.1233	No
153	FLI1	1422024_at 1433512_at 1441584_at	20634	-2.375	-0.1200	No
154	CTCF	1418330_at 1449042_at	20645	-2.384	-0.1113	No
155	PIM1	1423006_at 1435458_at	20778	-2.545	-0.1076	No
156	CDC5L	1428092_at 1460429_at	20816	-2.608	-0.0993	No
157	SP3	1431804_a_at 1459360_at	21004	-2.910	-0.0967	No
158	STAG2	1421849_at 1450396_at	21067	-3.048	-0.0878	No
159	KBTBD7	1428192_at 1439865_at 1452700_s_at	21590	-5.042	-0.0924	No
160	MCM3	1420029_at 1426653_at	21738	-6.271	-0.0751	No
161	ARID4A	1436191_at 1438464_at 1456420_at	21755	-6.438	-0.0511	No
162	ID3	1416630_at	21832	-7.406	-0.0261	No
163	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	21911	-8.023	0.0011	No