Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | ATM_plus |
GeneSet | V$CREBP1_Q2 |
Enrichment Score (ES) | -0.42226875 |
Normalized Enrichment Score (NES) | -1.6555954 |
Nominal p-value | 0.0 |
FDR q-value | 0.085030794 |
FWER p-Value | 0.367 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | MBNL1 | 1416904_at 1439686_at 1440315_at 1445106_at 1457924_at | 13 | 8.071 | 0.0314 | No | ||
2 | RAI1 | 1420454_at 1453200_at | 143 | 5.388 | 0.0468 | No | ||
3 | CEBPB | 1418901_at 1427844_a_at | 270 | 4.311 | 0.0581 | No | ||
4 | THRA | 1426997_at 1443952_at 1454675_at | 280 | 4.221 | 0.0745 | No | ||
5 | MAP1LC3A | 1447883_x_at 1451290_at | 360 | 3.857 | 0.0861 | No | ||
6 | SDHB | 1418005_at | 502 | 3.417 | 0.0932 | No | ||
7 | MRPS18B | 1451164_a_at | 685 | 2.970 | 0.0966 | No | ||
8 | RBBP8 | 1427061_at 1427062_at 1446097_at | 1039 | 2.403 | 0.0899 | No | ||
9 | ELOVL5 | 1415840_at 1437211_x_at 1459242_at | 1419 | 2.044 | 0.0806 | No | ||
10 | DHX36 | 1424397_at 1424398_at 1437550_at | 1503 | 2.001 | 0.0847 | No | ||
11 | PCSK1 | 1421396_at | 1892 | 1.786 | 0.0740 | No | ||
12 | ABR | 1433477_at | 2282 | 1.577 | 0.0623 | No | ||
13 | NPTX1 | 1422130_at 1434877_at | 2485 | 1.481 | 0.0589 | No | ||
14 | FOXD3 | 1422210_at | 2547 | 1.454 | 0.0619 | No | ||
15 | TACR1 | 1422282_at | 2549 | 1.453 | 0.0676 | No | ||
16 | SEMA4C | 1433920_at | 2594 | 1.439 | 0.0713 | No | ||
17 | RET | 1421359_at | 2630 | 1.426 | 0.0753 | No | ||
18 | GPR3 | 1460275_at | 2817 | 1.365 | 0.0722 | No | ||
19 | TRAP1 | 1416170_at 1437379_x_at | 3112 | 1.278 | 0.0637 | No | ||
20 | BAT5 | 1415732_at 1460709_a_at | 3121 | 1.275 | 0.0684 | No | ||
21 | WBP5 | 1451230_a_at | 3191 | 1.256 | 0.0702 | No | ||
22 | GRM3 | 1430136_at | 3201 | 1.254 | 0.0748 | No | ||
23 | WNT10A | 1460657_at | 3238 | 1.245 | 0.0781 | No | ||
24 | ZIM2 | 1432297_at | 3448 | 1.201 | 0.0732 | No | ||
25 | SCAMP5 | 1450247_a_at 1451224_at | 3461 | 1.197 | 0.0774 | No | ||
26 | ID1 | 1425895_a_at | 3846 | 1.120 | 0.0642 | No | ||
27 | SLC25A25 | 1424735_at 1447856_x_at 1454284_at | 3850 | 1.120 | 0.0685 | No | ||
28 | PPP1R12C | 1431092_at 1454848_at | 3918 | 1.111 | 0.0699 | No | ||
29 | DSCR1 | 1416600_a_at 1416601_a_at | 4246 | 1.054 | 0.0590 | No | ||
30 | LMO4 | 1420981_a_at 1439651_at | 4400 | 1.032 | 0.0561 | No | ||
31 | SUV39H2 | 1422979_at 1433996_at 1436561_at | 4425 | 1.029 | 0.0591 | No | ||
32 | RUSC1 | 1431137_at 1434743_x_at 1436014_a_at 1437991_x_at 1438017_at | 4452 | 1.026 | 0.0619 | No | ||
33 | PPM1A | 1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at | 4520 | 1.019 | 0.0629 | No | ||
34 | DMD | 1417307_at 1430320_at 1446156_at 1448665_at 1457022_at | 4532 | 1.018 | 0.0664 | No | ||
35 | KCNA5 | 1417680_at | 4548 | 1.015 | 0.0697 | No | ||
36 | FLRT3 | 1429310_at 1453102_at | 4695 | 1.001 | 0.0670 | No | ||
37 | CALM2 | 1422414_a_at 1423807_a_at | 4810 | 0.988 | 0.0657 | No | ||
38 | FGF6 | 1427582_at | 4949 | 0.973 | 0.0632 | No | ||
39 | ERF | 1422114_at 1435561_at | 5026 | 0.962 | 0.0635 | No | ||
40 | PPM2C | 1434228_at 1438201_at | 5054 | 0.959 | 0.0661 | No | ||
41 | PTPRU | 1416674_at 1446638_at | 5056 | 0.958 | 0.0698 | No | ||
42 | UBAP1 | 1423185_a_at 1444624_at 1450893_a_at | 5071 | 0.956 | 0.0730 | No | ||
43 | RPL41 | 1422623_x_at 1455578_x_at | 5402 | 0.908 | 0.0614 | No | ||
44 | MAF | 1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at | 5452 | 0.902 | 0.0627 | No | ||
45 | LCMT1 | 1417044_at | 5513 | 0.894 | 0.0635 | No | ||
46 | SCG2 | 1450708_at | 6330 | 0.789 | 0.0292 | No | ||
47 | FLT1 | 1419300_at 1440926_at 1451756_at 1454037_a_at | 6730 | 0.742 | 0.0138 | No | ||
48 | KCTD8 | 1441495_at 1444047_at 1455923_at | 6738 | 0.741 | 0.0164 | No | ||
49 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 6975 | 0.714 | 0.0084 | No | ||
50 | MESDC1 | 1416397_at 1416398_at | 6995 | 0.711 | 0.0103 | No | ||
51 | VGF | 1436094_at | 7152 | 0.693 | 0.0059 | No | ||
52 | DAAM2 | 1430247_at 1455717_s_at | 7488 | 0.652 | -0.0069 | No | ||
53 | HHEX | 1423319_at | 7542 | 0.648 | -0.0068 | No | ||
54 | KCNK1 | 1448690_at 1455896_a_at | 7842 | 0.616 | -0.0181 | No | ||
55 | IRX6 | 1427383_at | 7918 | 0.609 | -0.0191 | No | ||
56 | CX36 | 1423019_at 1435297_at | 7924 | 0.608 | -0.0169 | No | ||
57 | DDX51 | 1428728_at | 8133 | 0.586 | -0.0242 | No | ||
58 | SLC6A5 | 1425992_at | 8809 | 0.520 | -0.0531 | No | ||
59 | CBX3 | 1432628_at 1454305_at | 8818 | 0.519 | -0.0514 | No | ||
60 | GNG4 | 1417943_at 1417944_at 1447669_s_at | 9082 | 0.491 | -0.0616 | No | ||
61 | MAP3K13 | 1430137_at 1440749_at 1447699_at | 9174 | 0.482 | -0.0639 | No | ||
62 | CRH | 1457984_at | 9179 | 0.481 | -0.0621 | No | ||
63 | PAFAH1B1 | 1417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at | 9732 | 0.427 | -0.0858 | No | ||
64 | PPARGC1A | 1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at | 9733 | 0.427 | -0.0841 | No | ||
65 | PITX2 | 1424797_a_at 1450482_a_at | 9912 | 0.411 | -0.0907 | No | ||
66 | SLC6A4 | 1417150_at | 10178 | 0.385 | -0.1013 | No | ||
67 | SNF1LK | 1419766_at 1459601_at | 10479 | 0.357 | -0.1137 | No | ||
68 | PDLIM3 | 1443299_at 1449178_at | 10580 | 0.347 | -0.1169 | No | ||
69 | HOXD8 | 1431099_at 1433638_s_at | 10792 | 0.326 | -0.1253 | No | ||
70 | NAP1L2 | 1418046_at | 10824 | 0.323 | -0.1255 | No | ||
71 | HS6ST2 | 1420938_at 1420939_at 1446257_at 1450047_at | 11019 | 0.307 | -0.1332 | No | ||
72 | HS3ST2 | 1438624_x_at 1440814_x_at 1454784_at | 11463 | 0.264 | -0.1525 | No | ||
73 | SLC38A2 | 1426722_at 1429593_at 1429594_at | 11476 | 0.263 | -0.1520 | No | ||
74 | GTF2A1 | 1421357_at | 11616 | 0.248 | -0.1574 | No | ||
75 | SYNGR3 | 1416098_at 1448216_at | 11654 | 0.244 | -0.1581 | No | ||
76 | GNAS | 1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at | 11745 | 0.234 | -0.1613 | No | ||
77 | UCN | 1450610_at | 11899 | 0.218 | -0.1675 | No | ||
78 | OSR1 | 1449350_at | 11959 | 0.212 | -0.1694 | No | ||
79 | MSX2 | 1438351_at 1449559_at | 12020 | 0.206 | -0.1713 | No | ||
80 | PEG3 | 1417355_at 1417356_at 1433924_at 1447731_at 1447732_x_at | 12140 | 0.197 | -0.1760 | No | ||
81 | PNMA3 | 1456829_at | 12155 | 0.196 | -0.1759 | No | ||
82 | HOXC10 | 1439798_at | 12216 | 0.190 | -0.1779 | No | ||
83 | SLC31A1 | 1433750_at 1455285_at | 12316 | 0.181 | -0.1817 | No | ||
84 | EGR4 | 1449977_at | 12420 | 0.171 | -0.1857 | No | ||
85 | TRIB1 | 1424880_at 1424881_at | 12443 | 0.169 | -0.1861 | No | ||
86 | STAT3 | 1424272_at 1426587_a_at 1459961_a_at 1460700_at | 12643 | 0.151 | -0.1946 | No | ||
87 | KLF13 | 1432543_a_at 1456030_at | 12818 | 0.136 | -0.2021 | No | ||
88 | TH | 1420546_at | 12960 | 0.121 | -0.2081 | No | ||
89 | CHGB | 1415885_at | 13199 | 0.094 | -0.2187 | No | ||
90 | FOSB | 1422134_at | 13344 | 0.077 | -0.2250 | No | ||
91 | NUP214 | 1434351_at 1456503_at 1457815_at | 13468 | 0.063 | -0.2304 | No | ||
92 | NR2E1 | 1434921_at 1457289_at | 13600 | 0.049 | -0.2362 | No | ||
93 | CLDN7 | 1448393_at | 13708 | 0.038 | -0.2410 | No | ||
94 | BIN1 | 1423618_at 1425532_a_at 1444120_at | 13719 | 0.036 | -0.2413 | No | ||
95 | USP2 | 1417168_a_at 1417169_at | 13938 | 0.014 | -0.2512 | No | ||
96 | ELL2 | 1450744_at 1458569_at | 13954 | 0.012 | -0.2519 | No | ||
97 | SENP2 | 1425465_a_at 1425466_at 1451717_s_at 1455327_at | 14008 | 0.006 | -0.2543 | No | ||
98 | IRX4 | 1419539_at | 14009 | 0.006 | -0.2543 | No | ||
99 | NF1 | 1438067_at 1441523_at 1443097_at 1452525_a_at | 14116 | -0.007 | -0.2591 | No | ||
100 | ADAM9 | 1416094_at | 14118 | -0.007 | -0.2591 | No | ||
101 | HHIP | 1421426_at 1437933_at 1438083_at 1455277_at | 14366 | -0.035 | -0.2704 | No | ||
102 | NOL4 | 1430189_at 1441447_at 1456387_at | 14509 | -0.055 | -0.2767 | No | ||
103 | CALML3 | 1418608_at | 14604 | -0.066 | -0.2807 | No | ||
104 | PRR3 | 1424145_at | 14695 | -0.078 | -0.2845 | No | ||
105 | PDE4D | 1443289_at 1458212_at 1459289_at 1459311_at | 14861 | -0.099 | -0.2917 | No | ||
106 | SNAP25 | 1416828_at 1443398_at | 14921 | -0.106 | -0.2940 | No | ||
107 | PNRC1 | 1433668_at 1438524_x_at 1439513_at | 15263 | -0.153 | -0.3091 | No | ||
108 | LTBP1 | 1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at | 15406 | -0.175 | -0.3149 | No | ||
109 | RCE1 | 1418779_at | 15560 | -0.197 | -0.3212 | No | ||
110 | NEUROD6 | 1418047_at | 15630 | -0.209 | -0.3235 | No | ||
111 | SMARCD1 | 1448913_at | 15733 | -0.222 | -0.3273 | No | ||
112 | OSBPL9 | 1423383_a_at 1438614_x_at 1439283_at 1445627_at 1450964_a_at | 15938 | -0.261 | -0.3357 | No | ||
113 | CLDN6 | 1417845_at | 16078 | -0.286 | -0.3409 | No | ||
114 | RANBP2 | 1422621_at 1440104_at 1445883_at 1450690_at | 16092 | -0.289 | -0.3404 | No | ||
115 | NCALD | 1417568_at 1417569_at 1439730_at 1444466_at 1458037_at | 16132 | -0.297 | -0.3410 | No | ||
116 | CD2AP | 1420906_at 1420907_at 1420908_at 1460140_at | 16147 | -0.299 | -0.3404 | No | ||
117 | BRAF | 1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at | 16748 | -0.432 | -0.3663 | No | ||
118 | BCL11A | 1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at | 16815 | -0.447 | -0.3676 | No | ||
119 | AHI1 | 1439083_at 1455177_at | 16826 | -0.450 | -0.3662 | No | ||
120 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 16974 | -0.491 | -0.3710 | No | ||
121 | ATP10D | 1436544_at | 17052 | -0.507 | -0.3726 | No | ||
122 | HOXA3 | 1427433_s_at 1441070_at 1452421_at | 17068 | -0.512 | -0.3712 | No | ||
123 | CBX8 | 1419198_at 1419199_at | 17086 | -0.518 | -0.3700 | No | ||
124 | MCAM | 1416357_a_at | 17254 | -0.568 | -0.3754 | No | ||
125 | CCBL1 | 1428151_x_at 1438348_x_at 1446302_at 1452678_a_at | 17491 | -0.637 | -0.3837 | No | ||
126 | TPM4 | 1433883_at | 17625 | -0.682 | -0.3871 | No | ||
127 | GEM | 1426063_a_at | 17669 | -0.693 | -0.3863 | No | ||
128 | DIABLO | 1417683_at 1425768_at | 17822 | -0.743 | -0.3904 | No | ||
129 | GAK | 1426703_at 1426704_at | 17920 | -0.776 | -0.3918 | No | ||
130 | SPI1 | 1418747_at | 18153 | -0.865 | -0.3990 | No | ||
131 | PPIG | 1434475_at 1435341_at 1436505_at | 18167 | -0.869 | -0.3961 | No | ||
132 | RBMS2 | 1423540_at 1433979_at | 18274 | -0.904 | -0.3974 | No | ||
133 | TGIF2 | 1431115_at 1434400_at | 18425 | -0.955 | -0.4005 | No | ||
134 | NAPA | 1416192_at 1448243_at | 18521 | -0.987 | -0.4010 | No | ||
135 | CREM | 1418322_at 1430598_at 1430847_a_at 1449037_at | 18635 | -1.019 | -0.4021 | No | ||
136 | FGF13 | 1418497_at 1418498_at | 19002 | -1.169 | -0.4143 | No | ||
137 | UBQLN2 | 1420844_at 1450021_at 1456627_at | 19176 | -1.252 | -0.4173 | Yes | ||
138 | GPM6B | 1423091_a_at 1425942_a_at 1453514_at | 19201 | -1.263 | -0.4134 | Yes | ||
139 | SPHK2 | 1417431_a_at 1426230_at | 19206 | -1.266 | -0.4086 | Yes | ||
140 | PER1 | 1449851_at | 19247 | -1.290 | -0.4053 | Yes | ||
141 | EPHA2 | 1421151_a_at | 19298 | -1.318 | -0.4024 | Yes | ||
142 | SLC18A2 | 1437079_at | 19475 | -1.425 | -0.4048 | Yes | ||
143 | HNRPA2B1 | 1420365_a_at 1433829_a_at 1433830_at 1434047_x_at | 19519 | -1.461 | -0.4010 | Yes | ||
144 | MLF2 | 1423916_s_at | 19520 | -1.461 | -0.3952 | Yes | ||
145 | BCL2L13 | 1424406_at 1429539_at | 19651 | -1.540 | -0.3951 | Yes | ||
146 | ZMYND15 | 1438498_at | 19798 | -1.646 | -0.3952 | Yes | ||
147 | AGPAT1 | 1421024_at 1421025_at | 19846 | -1.677 | -0.3908 | Yes | ||
148 | EEF2 | 1424736_at 1440784_at 1441414_at | 20014 | -1.814 | -0.3912 | Yes | ||
149 | NR4A3 | 1421079_at 1421080_at | 20103 | -1.887 | -0.3878 | Yes | ||
150 | THRAP3 | 1427408_a_at 1438286_at 1446031_at 1452125_at 1460545_at | 20191 | -1.963 | -0.3840 | Yes | ||
151 | DDX3X | 1416467_at 1423042_at 1423043_s_at | 20266 | -2.006 | -0.3795 | Yes | ||
152 | DLST | 1423710_at 1430161_at 1431011_at 1437775_at | 20381 | -2.080 | -0.3765 | Yes | ||
153 | IKBKB | 1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at | 20388 | -2.086 | -0.3685 | Yes | ||
154 | MAFF | 1418936_at | 20419 | -2.118 | -0.3614 | Yes | ||
155 | RING1 | 1422647_at | 20545 | -2.259 | -0.3582 | Yes | ||
156 | YME1L1 | 1423360_at 1423361_at 1437822_at 1450954_at | 20652 | -2.394 | -0.3536 | Yes | ||
157 | RNF5 | 1422888_at | 20827 | -2.618 | -0.3512 | Yes | ||
158 | ELAVL1 | 1428653_x_at 1431037_a_at 1440373_at 1440464_at 1445521_at 1447109_at 1448151_at 1452858_at | 20876 | -2.702 | -0.3427 | Yes | ||
159 | PPP1R10 | 1426726_at 1426727_s_at 1430560_at | 20899 | -2.728 | -0.3329 | Yes | ||
160 | ATP6V0C | 1416392_a_at 1435732_x_at 1438925_x_at | 21023 | -2.950 | -0.3269 | Yes | ||
161 | AGPAT4 | 1428336_at 1436640_x_at | 21039 | -2.977 | -0.3158 | Yes | ||
162 | PPP2R2A | 1429715_at 1437730_at 1453260_a_at | 21059 | -3.027 | -0.3046 | Yes | ||
163 | DACT1 | 1417937_at | 21253 | -3.502 | -0.2996 | Yes | ||
164 | FOS | 1423100_at | 21307 | -3.658 | -0.2876 | Yes | ||
165 | ZBTB11 | 1454826_at | 21318 | -3.690 | -0.2734 | Yes | ||
166 | ZZEF1 | 1434192_at 1438691_at 1446081_at 1453583_at | 21407 | -4.014 | -0.2615 | Yes | ||
167 | DUSP1 | 1448830_at | 21619 | -5.241 | -0.2504 | Yes | ||
168 | SMAD1 | 1416081_at 1448208_at 1459843_s_at | 21702 | -5.922 | -0.2307 | Yes | ||
169 | ICA1 | 1417901_a_at 1431644_a_at | 21751 | -6.417 | -0.2075 | Yes | ||
170 | RAB6A | 1447776_x_at 1448304_a_at 1448305_at | 21770 | -6.682 | -0.1818 | Yes | ||
171 | ID3 | 1416630_at | 21832 | -7.406 | -0.1553 | Yes | ||
172 | NR4A2 | 1447863_s_at 1450749_a_at 1450750_a_at 1455034_at | 21861 | -7.700 | -0.1260 | Yes | ||
173 | CCND2 | 1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at | 21869 | -7.737 | -0.0957 | Yes | ||
174 | EGR2 | 1427682_a_at 1427683_at | 21921 | -8.208 | -0.0655 | Yes | ||
175 | EGR3 | 1421486_at 1436329_at | 21923 | -8.252 | -0.0328 | Yes | ||
176 | EGR1 | 1417065_at | 21931 | -8.413 | 0.0002 | Yes |