Details for gene set V$ATF6

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$ATF6_01
Enrichment Score (ES)	-0.54476154
Normalized Enrichment Score (NES)	-1.9566823
Nominal p-value	0.0
FDR q-value	0.0107426215
FWER p-Value	0.0080

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TLE3	1419654_at 1419655_at 1449554_at 1458512_at	292	4.160	0.0150	No
2	MRPS18B	1451164_a_at	685	2.970	0.0173	No
3	EIF4A1	1427058_at 1430980_a_at 1434985_a_at	1288	2.138	0.0043	No
4	TNKS2	1428388_at 1437793_at 1447522_s_at 1452772_at 1457468_at	1370	2.079	0.0148	No
5	NPTX1	1422130_at 1434877_at	2485	1.481	-0.0261	No
6	GOLGB1	1433135_at 1435032_at 1460535_at	2501	1.473	-0.0168	No
7	LMX1B	1421769_at	2518	1.467	-0.0075	No
8	GCC1	1424799_a_at 1429033_at	2520	1.467	0.0025	No
9	TPT1	1416642_a_at 1416643_at	3003	1.311	-0.0107	No
10	TRPC1	1421095_a_at 1421096_at	4066	1.084	-0.0519	No
11	RAB2	1418621_at 1418622_at 1418623_at 1419945_s_at 1419946_s_at 1436477_x_at 1449676_at	4272	1.050	-0.0541	No
12	LMO4	1420981_a_at 1439651_at	4400	1.032	-0.0529	No
13	ERF	1422114_at 1435561_at	5026	0.962	-0.0749	No
14	FLNC	1424063_at 1447812_x_at 1449073_at	5248	0.931	-0.0787	No
15	PTOV1	1416945_at 1438058_s_at 1458357_x_at	5272	0.929	-0.0734	No
16	GFRA1	1421973_at 1439015_at 1450440_at	5359	0.914	-0.0711	No
17	LENG9	1440190_at 1440191_s_at 1455497_at	5460	0.901	-0.0696	No
18	ETV6	1423401_at 1434880_at 1444598_at 1457944_at	5880	0.845	-0.0830	No
19	TBX20	1422219_a_at 1425158_at 1453351_at	5927	0.840	-0.0794	No
20	SLC39A5	1429523_a_at	6046	0.826	-0.0791	No
21	GRIA3	1420563_at 1434728_at	6140	0.813	-0.0779	No
22	TYRO3	1425248_a_at 1425249_a_at	6450	0.774	-0.0867	No
23	HCRTR2	1444223_at	6667	0.748	-0.0915	No
24	TWIST1	1418733_at	6685	0.746	-0.0872	No
25	ADAMTS3	1441693_at 1458143_at	7080	0.701	-0.1005	No
26	KCNA6	1421568_at 1441049_at 1456954_at	7455	0.656	-0.1131	No
27	KDELR3	1418538_at	7910	0.609	-0.1297	No
28	SLC22A17	1448209_a_at	8042	0.595	-0.1317	No
29	DUSP4	1428834_at	8420	0.558	-0.1451	No
30	GSC	1421412_at	8813	0.519	-0.1595	No
31	IL1RAPL1	1445821_at 1458964_at	8916	0.510	-0.1607	No
32	LHX5	1420348_at	8977	0.502	-0.1600	No
33	GNG4	1417943_at 1417944_at 1447669_s_at	9082	0.491	-0.1615	No
34	PITX2	1424797_a_at 1450482_a_at	9912	0.411	-0.1966	No
35	IRX3	1418517_at	10236	0.379	-0.2088	No
36	SCYL1	1430354_x_at 1436804_s_at 1451051_a_at	11405	0.270	-0.2604	No
37	ARMCX2	1415780_a_at 1437849_x_at 1456739_x_at	11613	0.248	-0.2682	No
38	HOXB9	1452317_at	11753	0.233	-0.2730	No
39	KDELR1	1460211_a_at	12111	0.200	-0.2880	No
40	C1QTNF7	1429030_at 1460163_at	12147	0.196	-0.2882	No
41	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	12643	0.151	-0.3099	No
42	KLF13	1432543_a_at 1456030_at	12818	0.136	-0.3169	No
43	SP1	1418180_at 1448994_at 1454852_at	13186	0.095	-0.3330	No
44	NTRK2	1420837_at 1420838_at 1435196_at 1435305_at 1437560_at 1446712_at	13214	0.093	-0.3337	No
45	NKX2-2	1421112_at	13312	0.080	-0.3375	No
46	USP2	1417168_a_at 1417169_at	13938	0.014	-0.3661	No
47	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14134	-0.009	-0.3749	No
48	NANS	1417773_at 1417774_at	14272	-0.025	-0.3810	No
49	XPNPEP1	1422443_at	14332	-0.031	-0.3835	No
50	NOL4	1430189_at 1441447_at 1456387_at	14509	-0.055	-0.3912	No
51	GRIN2B	1422223_at 1431700_at	14788	-0.090	-0.4033	No
52	GDNF	1419080_at	15652	-0.213	-0.4414	No
53	PAX1	1449359_at	15686	-0.217	-0.4414	No
54	SRP19	1450891_at	15754	-0.227	-0.4429	No
55	KDELR2	1417204_at 1417205_at	15872	-0.247	-0.4466	No
56	TLOC1	1432635_a_at 1433704_s_at 1439233_at 1444811_at 1454697_at 1455698_at	16575	-0.387	-0.4761	No
57	GBF1	1415709_s_at 1415757_at 1432677_at 1438207_at	16626	-0.398	-0.4757	No
58	LHX1	1421951_at 1450428_at	16696	-0.419	-0.4760	No
59	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	16974	-0.491	-0.4853	No
60	ATBF1	1420649_at 1420650_at 1429725_at 1445941_at 1446094_at 1449947_s_at 1453267_at 1460006_at	17596	-0.674	-0.5091	No
61	TPM4	1433883_at	17625	-0.682	-0.5058	No
62	SLC39A13	1423926_at	17744	-0.713	-0.5063	No
63	SYT11	1429314_at 1429315_at 1429729_at 1436176_at 1449264_at 1455176_a_at	18452	-0.966	-0.5321	No
64	DHX40	1428267_at 1457839_at	18471	-0.971	-0.5263	No
65	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	18635	-1.019	-0.5268	No
66	SLC30A5	1422497_at	18926	-1.131	-0.5324	No
67	PHC1	1423212_at	19196	-1.261	-0.5361	Yes
68	PER1	1449851_at	19247	-1.290	-0.5296	Yes
69	SEC24D	1426972_at 1458821_at	19464	-1.418	-0.5298	Yes
70	GRB2	1418508_a_at 1449111_a_at	19792	-1.642	-0.5336	Yes
71	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19917	-1.734	-0.5274	Yes
72	BRD2	1423502_at 1437210_a_at	20153	-1.934	-0.5250	Yes
73	STAG1	1421939_a_at 1421940_at 1431921_a_at 1434189_at 1435731_x_at 1445145_at 1445652_at 1450420_at	20185	-1.957	-0.5131	Yes
74	DLST	1423710_at 1430161_at 1431011_at 1437775_at	20381	-2.080	-0.5078	Yes
75	OSBP	1460350_at	20463	-2.166	-0.4968	Yes
76	ELF1	1417540_at 1439319_at	20812	-2.600	-0.4950	Yes
77	PPP1R10	1426726_at 1426727_s_at 1430560_at	20899	-2.728	-0.4803	Yes
78	MADD	1425735_at 1455502_at	21006	-2.926	-0.4652	Yes
79	SH2D2A	1449105_at	21347	-3.804	-0.4549	Yes
80	TRIM39	1418851_at	21349	-3.809	-0.4289	Yes
81	SEC23A	1423347_at	21532	-4.589	-0.4060	Yes
82	SEMA3B	1416644_a_at 1431795_a_at 1448415_a_at	21575	-4.900	-0.3745	Yes
83	RAB6IP1	1424015_at	21612	-5.201	-0.3407	Yes
84	RORC	1425792_a_at 1425793_a_at	21670	-5.593	-0.3052	Yes
85	ICA1	1417901_a_at 1431644_a_at	21751	-6.417	-0.2651	Yes
86	NR4A1	1416505_at	21809	-7.139	-0.2190	Yes
87	ARF4	1423052_at 1423053_at 1434074_x_at 1439367_x_at 1442905_at 1457348_at	21914	-8.086	-0.1687	Yes
88	EGR2	1427682_a_at 1427683_at	21921	-8.208	-0.1130	Yes
89	EGR3	1421486_at 1436329_at	21923	-8.252	-0.0568	Yes
90	EGR1	1417065_at	21931	-8.413	0.0002	Yes