Details for gene set V$AREB6

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AREB6_04
Enrichment Score (ES)	-0.39216152
Normalized Enrichment Score (NES)	-1.551654
Nominal p-value	0.0017006802
FDR q-value	0.12996009
FWER p-Value	0.803

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	TAGLN2	1426529_a_at	904	2.585	-0.0287	No
2	GART	1416283_at 1424435_a_at 1424436_at 1441911_x_at	989	2.461	-0.0202	No
3	OLFML3	1448475_at	1164	2.238	-0.0170	No
4	PXN	1424027_at 1426085_a_at 1456135_s_at	1296	2.132	-0.0124	No
5	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	1532	1.987	-0.0133	No
6	GEMIN4	1433622_at	1814	1.838	-0.0170	No
7	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	1986	1.735	-0.0162	No
8	WNT2B	1421465_at	2040	1.702	-0.0101	No
9	M6PR	1416385_a_at 1416386_a_at	2042	1.701	-0.0017	No
10	CTGF	1416953_at	2468	1.493	-0.0138	No
11	PCBP4	1433658_x_at 1449054_a_at 1449055_x_at	2544	1.455	-0.0100	No
12	MSH5	1430771_a_at 1449537_at	2749	1.388	-0.0124	No
13	ELOVL6	1417403_at 1417404_at 1445062_at 1445578_at 1445641_at	2940	1.328	-0.0145	No
14	PIK3R3	1445097_at 1447068_at 1456482_at	2977	1.318	-0.0096	No
15	EIF4G1	1427036_a_at 1427037_at 1438686_at	3507	1.185	-0.0280	No
16	GNB2L1	1440120_at 1455168_a_at	3597	1.166	-0.0262	No
17	LGI2	1440147_at 1457040_at	3812	1.128	-0.0304	No
18	PRDM1	1420425_at 1444997_at	4071	1.083	-0.0369	No
19	TRPS1	1434286_at 1438214_at 1440026_at 1441333_at 1443161_at 1449530_at 1456983_at 1457445_at	4385	1.035	-0.0461	No
20	LMO4	1420981_a_at 1439651_at	4400	1.032	-0.0416	No
21	WNT4	1450782_at	4462	1.025	-0.0393	No
22	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	4532	1.018	-0.0374	No
23	FES	1427368_x_at 1452410_a_at	4578	1.012	-0.0344	No
24	HMGB1	1416176_at 1425048_a_at 1435324_x_at	4761	0.994	-0.0378	No
25	RASGRF1	1422600_at 1424734_at 1435614_s_at 1459049_at 1459056_at	4833	0.986	-0.0361	No
26	NDST4	1421318_at 1431452_at 1450195_at	4974	0.970	-0.0377	No
27	OMG	1418212_at	5061	0.957	-0.0369	No
28	FZD1	1422985_at 1437284_at	5075	0.955	-0.0327	No
29	TMC5	1452934_at	5360	0.914	-0.0412	No
30	GABRQ	1421536_at	5604	0.882	-0.0480	No
31	SHC3	1450326_at	5841	0.850	-0.0546	No
32	HOXA11	1420414_at	6070	0.824	-0.0610	No
33	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6090	0.821	-0.0577	No
34	PLEC1	1419835_s_at 1434610_at 1437554_at	6119	0.816	-0.0549	No
35	TRERF1	1444654_at	6284	0.795	-0.0585	No
36	HTR2C	1435513_at 1450477_at	6542	0.763	-0.0665	No
37	BMP4	1422912_at	6609	0.756	-0.0658	No
38	EFNA1	1416895_at 1448510_at	6827	0.731	-0.0721	No
39	HR	1422110_at 1435950_at	6863	0.726	-0.0701	No
40	LMOD1	1427485_at	7046	0.706	-0.0749	No
41	SOSTDC1	1449340_at 1460250_at	7112	0.698	-0.0744	No
42	ATP8B3	1419713_at 1438604_at	7354	0.667	-0.0822	No
43	SDK2	1430425_at 1457333_at	7389	0.664	-0.0804	No
44	FOXP2	1422014_at 1438231_at 1438232_at 1440108_at 1441365_at 1458191_at	7614	0.640	-0.0875	No
45	TSGA10	1436045_at 1447283_at	7629	0.638	-0.0850	No
46	HSPB2	1429888_a_at	7725	0.628	-0.0862	No
47	PHEX	1421979_at 1450445_at	7993	0.601	-0.0955	No
48	TNFRSF17	1420782_at	8049	0.594	-0.0950	No
49	ESRRG	1421747_at 1455267_at 1457896_at	8157	0.584	-0.0970	No
50	CRYAB	1416455_a_at 1434369_a_at 1435837_at	8224	0.578	-0.0972	No
51	FBLN5	1416164_at 1446377_at	8446	0.555	-0.1046	No
52	NEUROG1	1438551_at 1450836_at	8447	0.555	-0.1018	No
53	PURG	1424970_at 1452029_a_at	8475	0.552	-0.1003	No
54	ATP1B4	1422908_at	8533	0.546	-0.1002	No
55	TRIM14	1430796_at	8590	0.540	-0.1001	No
56	EBF2	1418494_at 1446128_at 1449101_at 1449102_at	8600	0.539	-0.0978	No
57	FCHSD2	1434260_at 1456949_at	8690	0.531	-0.0992	No
58	SOX11	1429051_s_at 1429372_at 1431225_at 1436790_a_at 1453002_at 1453125_at	8922	0.509	-0.1073	No
59	PABPC5	1446162_at	8944	0.506	-0.1057	No
60	PPP1R9B	1447247_at 1447486_at	8970	0.503	-0.1044	No
61	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	8982	0.502	-0.1024	No
62	FLRT1	1443143_at	9012	0.499	-0.1012	No
63	ARPP-19	1422609_at 1441455_at 1450685_at	9052	0.494	-0.1005	No
64	ASPN	1416652_at 1448421_s_at	9160	0.483	-0.1030	No
65	OTP	1422285_at	9277	0.474	-0.1060	No
66	SLC30A3	1460654_at	9348	0.466	-0.1069	No
67	CHST1	1449147_at	9369	0.464	-0.1055	No
68	NXF3	1456035_at	9473	0.454	-0.1080	No
69	KCNK5	1421852_at 1450398_at	9514	0.450	-0.1076	No
70	HOXA2	1419602_at	9521	0.448	-0.1056	No
71	PURB	1419640_at 1419641_at 1419642_at 1428254_at 1436940_at	9760	0.425	-0.1144	No
72	WNT2	1449425_at	10054	0.396	-0.1259	No
73	ANKRD22	1421651_at 1453239_a_at	10389	0.366	-0.1394	No
74	RORA	1420583_a_at 1424034_at 1424035_at 1436325_at 1436326_at 1441085_at 1443511_at 1443647_at 1446360_at 1455165_at 1457177_at 1458129_at	10565	0.349	-0.1457	No
75	FOXA1	1418496_at	10620	0.344	-0.1465	No
76	COL8A1	1418440_at 1418441_at 1442794_at 1447819_x_at 1455627_at	10660	0.340	-0.1466	No
77	VAX1	1421774_at	10791	0.326	-0.1509	No
78	NFATC4	1423380_s_at 1432821_at 1454369_a_at	10798	0.325	-0.1496	No
79	SOX10	1424985_a_at 1425369_a_at 1451689_a_at	10944	0.312	-0.1547	No
80	PPP1R1B	1451331_at	10986	0.309	-0.1550	No
81	CMKLR1	1426072_at 1456887_at	11034	0.305	-0.1557	No
82	TJP1	1417749_a_at	11051	0.304	-0.1549	No
83	MAFB	1451715_at 1451716_at	11067	0.303	-0.1541	No
84	LRRN3	1434539_at	11114	0.299	-0.1547	No
85	SLN	1420883_at 1420884_at	11342	0.276	-0.1638	No
86	ROM1	1448996_at	11409	0.269	-0.1654	No
87	POFUT1	1443881_at 1450137_at 1456323_at	11414	0.269	-0.1643	No
88	ERG	1425370_a_at 1440244_at	11523	0.258	-0.1680	No
89	SPG20	1424875_at 1424876_s_at	11833	0.225	-0.1810	No
90	NRK	1436399_s_at 1450078_at 1450079_at	12087	0.201	-0.1917	No
91	HOXC10	1439798_at	12216	0.190	-0.1966	No
92	ZADH2	1451277_at	12229	0.189	-0.1962	No
93	EFNB2	1419638_at 1419639_at 1440069_at 1449548_at 1449549_at	12280	0.184	-0.1976	No
94	GATA6	1425463_at 1425464_at 1443081_at	12489	0.165	-0.2063	No
95	OTX2	1425926_a_at	12906	0.126	-0.2248	No
96	PDZRN4	1456512_at	13124	0.103	-0.2343	No
97	NR6A1	1421515_at 1421516_at 1428825_at 1428826_at 1445872_at	13153	0.100	-0.2351	No
98	WRN	1425074_at 1425982_a_at 1450163_a_at	13429	0.067	-0.2474	No
99	PHF15	1430081_at 1455345_at	13491	0.061	-0.2499	No
100	POU4F1	1429667_at 1429668_at	13756	0.033	-0.2619	No
101	KLF12	1439846_at 1439847_s_at 1441040_at 1455521_at	13967	0.010	-0.2715	No
102	ST5	1428372_at	14096	-0.004	-0.2774	No
103	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	14116	-0.007	-0.2782	No
104	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	14132	-0.009	-0.2788	No
105	FOXA2	1422833_at	14181	-0.014	-0.2810	No
106	DDX17	1437773_x_at 1439037_at 1452155_a_at	14190	-0.015	-0.2813	No
107	IRX5	1421072_at	14265	-0.024	-0.2846	No
108	BDNF	1422168_a_at 1422169_a_at	14499	-0.053	-0.2950	No
109	MAPK3	1427060_at	14832	-0.095	-0.3098	No
110	SNAP25	1416828_at 1443398_at	14921	-0.106	-0.3133	No
111	NFIX	1423493_a_at 1436363_a_at 1436364_x_at 1451443_at 1459909_at	14984	-0.114	-0.3156	No
112	FGF9	1420795_at 1438718_at 1445258_at	15056	-0.126	-0.3182	No
113	SOX4	1455867_at 1458332_x_at	15286	-0.157	-0.3280	No
114	CDC37L1	1417740_at 1430205_a_at 1433574_at 1440886_at 1447753_at	15300	-0.159	-0.3278	No
115	MAP1A	1460566_at	15363	-0.168	-0.3298	No
116	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	15406	-0.175	-0.3308	No
117	KLF5	1430255_at 1451021_a_at 1451739_at	15413	-0.177	-0.3302	No
118	NAV3	1459440_at	15554	-0.197	-0.3357	No
119	BCL9L	1419180_at 1438806_at 1443700_at 1444855_at	15693	-0.218	-0.3410	No
120	KCNJ2	1450503_at	16045	-0.280	-0.3557	No
121	HIST1H1C	1416101_a_at 1436994_a_at 1438204_at	16056	-0.282	-0.3547	No
122	PCDH7	1427592_at 1437442_at 1449249_at 1456214_at	16151	-0.300	-0.3576	No
123	MMRN1	1430621_at 1437260_at	16156	-0.301	-0.3562	No
124	ERBB3	1434606_at 1452482_at	16241	-0.318	-0.3585	No
125	XPO1	1418442_at 1418443_at 1448070_at	16374	-0.344	-0.3629	No
126	ITGBL1	1425039_at	16384	-0.346	-0.3616	No
127	HPCAL1	1448812_at	16466	-0.362	-0.3635	No
128	LST1	1425548_a_at	16497	-0.369	-0.3630	No
129	ITIH2	1417618_at	16615	-0.395	-0.3664	No
130	SON	1420951_a_at 1420952_at 1435862_at 1437924_at 1438871_at 1439074_a_at 1455634_at 1456630_x_at 1457596_at	16635	-0.401	-0.3653	No
131	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	16815	-0.447	-0.3713	No
132	NFKB1	1427705_a_at 1442949_at	16839	-0.453	-0.3701	No
133	IL7R	1448575_at 1448576_at	16887	-0.466	-0.3699	No
134	FAP	1417552_at	16916	-0.472	-0.3688	No
135	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	17050	-0.506	-0.3724	No
136	NMNAT2	1436155_at	17051	-0.507	-0.3699	No
137	ATOH8	1426418_at	17054	-0.508	-0.3674	No
138	RAB35	1433922_at	17233	-0.560	-0.3728	No
139	ARF6	1418822_a_at 1418823_at 1418824_at	17290	-0.576	-0.3725	No
140	PKP4	1438677_at 1452209_at	17374	-0.601	-0.3733	No
141	HNF4A	1421983_s_at 1427000_at 1427001_s_at 1450447_at	17387	-0.604	-0.3709	No
142	HIP1R	1425551_at 1425552_at 1425553_s_at 1444832_at	17542	-0.658	-0.3747	No
143	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	17738	-0.710	-0.3801	No
144	TCF4	1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at	17742	-0.712	-0.3767	No
145	CLIC1	1416656_at 1458665_at	17809	-0.739	-0.3760	No
146	CWF19L2	1453688_at 1456019_at	17880	-0.764	-0.3754	No
147	SLC7A11	1420413_at 1443536_at	17997	-0.803	-0.3767	No
148	KLF7	1419354_at 1419355_at 1419356_at 1449439_at 1458389_at	18278	-0.904	-0.3851	No
149	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	18433	-0.959	-0.3874	Yes
150	SMARCA2	1430526_a_at 1439930_at 1452333_at	18506	-0.981	-0.3858	Yes
151	MRPL51	1416877_a_at 1416878_at 1416879_at	18605	-1.008	-0.3852	Yes
152	BMF	1422995_at 1454880_s_at 1458325_x_at	18712	-1.042	-0.3849	Yes
153	SLA2	1437504_at 1451492_at	18752	-1.059	-0.3814	Yes
154	PAN3	1428768_at 1440149_at 1447895_x_at 1458465_at	18837	-1.094	-0.3798	Yes
155	TGIF	1422286_a_at	18917	-1.127	-0.3778	Yes
156	FGF13	1418497_at 1418498_at	19002	-1.169	-0.3758	Yes
157	FUT8	1441015_at 1442483_at 1443656_at 1456367_at 1460319_at	19014	-1.173	-0.3705	Yes
158	BRMS1L	1452850_s_at 1460443_at	19085	-1.203	-0.3677	Yes
159	RNF24	1436101_at 1453929_at	19160	-1.247	-0.3649	Yes
160	H2AFV	1428029_a_at 1436596_at	19457	-1.415	-0.3714	Yes
161	HNRPUL1	1451984_at	19530	-1.468	-0.3674	Yes
162	PDCD4	1444171_at	19569	-1.485	-0.3617	Yes
163	EDN1	1451924_a_at	19593	-1.494	-0.3553	Yes
164	SLC25A23	1419045_at	19738	-1.602	-0.3539	Yes
165	SLCO2A1	1420913_at 1450032_at	19841	-1.673	-0.3502	Yes
166	STAT6	1421708_a_at 1426353_at	19854	-1.685	-0.3424	Yes
167	DUSP6	1415834_at	20035	-1.829	-0.3415	Yes
168	SWAP70	1423543_at 1434225_at 1440809_at	20051	-1.851	-0.3329	Yes
169	CHD6	1427384_at 1431047_at	20259	-2.004	-0.3324	Yes
170	PRKAG1	1417690_at 1433533_x_at 1457803_at	20271	-2.010	-0.3229	Yes
171	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	20393	-2.092	-0.3180	Yes
172	LAG3	1449911_at	20459	-2.160	-0.3102	Yes
173	NEDD9	1422818_at 1437132_x_at 1447885_x_at 1450767_at	20487	-2.189	-0.3005	Yes
174	AKT2	1421324_a_at 1424480_s_at 1455703_at	20735	-2.493	-0.2994	Yes
175	MXI1	1425732_a_at 1450376_at	20868	-2.692	-0.2920	Yes
176	SERTAD4	1454877_at	20886	-2.716	-0.2793	Yes
177	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	20890	-2.720	-0.2658	Yes
178	PDE3B	1433694_at	20971	-2.853	-0.2552	Yes
179	RFX5	1423103_at	20991	-2.890	-0.2416	Yes
180	STAG2	1421849_at 1450396_at	21067	-3.048	-0.2299	Yes
181	VAMP4	1422895_at 1422896_at 1434796_at	21079	-3.077	-0.2150	Yes
182	LTA	1420353_at	21087	-3.107	-0.1998	Yes
183	PPP3CB	1427468_at 1428473_at 1428474_at 1433835_at 1446149_at 1459378_at	21287	-3.607	-0.1909	Yes
184	DEF6	1452796_at	21418	-4.055	-0.1766	Yes
185	JUNB	1415899_at	21479	-4.278	-0.1580	Yes
186	JMJD1A	1426810_at	21588	-5.017	-0.1379	Yes
187	PSCDBP	1435697_a_at 1451206_s_at	21842	-7.505	-0.1120	Yes
188	GNB4	1419469_at 1419470_at	21853	-7.635	-0.0743	Yes
189	IGF1R	1426565_at 1437219_at 1443566_at 1445600_at 1445664_at 1446303_at	21884	-7.807	-0.0367	Yes
190	CDKN2C	1416868_at 1439164_at	21886	-7.816	0.0023	Yes