Details for gene set V$AML1

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$AML1_Q6
Enrichment Score (ES)	-0.38955903
Normalized Enrichment Score (NES)	-1.5408003
Nominal p-value	0.0
FDR q-value	0.12311093
FWER p-Value	0.839

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	INPPL1	1460394_a_at	163	5.184	0.0135	No
2	SLC6A9	1417636_at 1431812_a_at	564	3.268	0.0083	No
3	RCOR2	1417302_at	627	3.122	0.0180	No
4	NDUFA9	1416663_at	683	2.972	0.0275	No
5	ACSL5	1428082_at	774	2.801	0.0347	No
6	EIF2B3	1434524_at	887	2.619	0.0401	No
7	CYP17A1	1417017_at	1198	2.210	0.0348	No
8	PXN	1424027_at 1426085_a_at 1456135_s_at	1296	2.132	0.0390	No
9	PSMA1	1415695_at 1436769_at 1436770_x_at 1458292_at	1532	1.987	0.0362	No
10	HDGF	1415888_at 1419964_s_at 1449681_at	1592	1.960	0.0414	No
11	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	1602	1.951	0.0489	No
12	JDP2	1424972_at 1450350_a_at	1672	1.917	0.0535	No
13	PDZK1	1431701_a_at	1722	1.890	0.0588	No
14	PRICKLE1	1441663_at 1442172_at 1442400_at 1444759_at 1452249_at 1457637_at	1864	1.803	0.0596	No
15	CHES1	1434002_at 1436925_at 1438255_at 1440607_at 1444555_at 1447325_at 1453094_at	1986	1.735	0.0611	No
16	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	2241	1.602	0.0559	No
17	STRC	1421695_at	2277	1.580	0.0607	No
18	SCEL	1422837_at 1459426_at	2294	1.571	0.0663	No
19	AGTRL1	1423037_at 1438651_a_at	2466	1.493	0.0645	No
20	ADAMTS4	1452595_at	2965	1.321	0.0469	No
21	CRTAC1	1426606_at 1452936_at 1457474_at 1459858_x_at	3049	1.297	0.0483	No
22	THBS3	1416623_at	3172	1.261	0.0478	No
23	DKK1	1420360_at 1458232_at	3198	1.254	0.0517	No
24	VRK1	1425006_a_at 1458951_at	3273	1.238	0.0533	No
25	MPL	1421461_at 1451919_a_at	3418	1.208	0.0516	No
26	ATP6V0B	1416769_s_at 1425448_x_at 1437013_x_at	3611	1.163	0.0475	No
27	KCNJ1	1418613_at 1418614_at	3742	1.141	0.0461	No
28	COL4A1	1426348_at 1452035_at	3786	1.133	0.0487	No
29	FOXD2	1450289_at	3791	1.132	0.0531	No
30	MMP14	1416572_at 1448383_at	3795	1.132	0.0575	No
31	DAB1	1421100_a_at 1427307_a_at 1427308_at 1435577_at 1435578_s_at	3842	1.121	0.0600	No
32	HLX1	1418939_at	3949	1.106	0.0596	No
33	FCER1G	1418340_at	3980	1.098	0.0626	No
34	SLC15A3	1420697_at	4117	1.074	0.0607	No
35	SLITRK5	1429718_at	4363	1.037	0.0536	No
36	MOAP1	1431823_at 1448787_at	4381	1.035	0.0570	No
37	SUPT16H	1419741_at 1449578_at 1456449_at	4446	1.026	0.0582	No
38	LMO2	1454086_a_at	4846	0.984	0.0439	No
39	HOXC4	1422870_at	4907	0.978	0.0451	No
40	RASAL2	1436910_at 1444671_at	5125	0.949	0.0389	No
41	RAB39	1437762_at	5529	0.892	0.0240	No
42	RAB30	1426452_a_at	5709	0.868	0.0193	No
43	ARF3	1421789_s_at 1423973_a_at 1434787_at 1437331_a_at 1456007_at	5831	0.851	0.0172	No
44	EMP1	1416529_at 1459171_at	5909	0.842	0.0170	No
45	CLDN10	1426147_s_at	6074	0.823	0.0128	No
46	DDX23	1430050_at	6080	0.822	0.0159	No
47	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	6090	0.821	0.0188	No
48	TBK1	1422469_at 1445571_at 1460315_s_at	6133	0.814	0.0202	No
49	ARHGAP12	1431052_at 1444463_at 1451525_at 1451526_at	6253	0.798	0.0179	No
50	AKAP3	1421531_at 1456591_x_at	6261	0.797	0.0208	No
51	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	6267	0.796	0.0238	No
52	PTK9	1420873_at 1420874_at 1420875_at	6429	0.777	0.0195	No
53	TITF1	1422346_at	6446	0.775	0.0219	No
54	ZBTB8	1455193_at	6563	0.761	0.0197	No
55	RAB5B	1422119_at 1437446_at	6643	0.751	0.0191	No
56	PDE6H	1450765_a_at 1450766_at	6668	0.748	0.0210	No
57	KIF1B	1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at	6945	0.716	0.0112	No
58	MTX1	1418521_a_at 1418522_at 1447361_at	7440	0.658	-0.0088	No
59	PLXNC1	1423213_at 1423214_at 1443433_at 1443434_s_at 1450905_at 1450906_at	7474	0.654	-0.0077	No
60	RIN1	1424507_at 1437460_x_at	7631	0.638	-0.0123	No
61	SIRT1	1418640_at 1458538_at	7772	0.623	-0.0162	No
62	TBX5	1425694_at 1425695_at	7782	0.622	-0.0141	No
63	SCN3B	1426328_a_at 1435767_at	8154	0.584	-0.0288	No
64	KCTD4	1420537_at 1441801_at	8367	0.564	-0.0363	No
65	TNFSF4	1421744_at	8492	0.550	-0.0398	No
66	IFNG	1425947_at	8510	0.549	-0.0383	No
67	RGS18	1420398_at 1449856_at	8584	0.541	-0.0395	No
68	NUCB2	1418355_at	8942	0.506	-0.0539	No
69	ANXA8	1417732_at 1425789_s_at	8955	0.504	-0.0524	No
70	IL23A	1419529_at	9109	0.489	-0.0574	No
71	ANKRD1	1420991_at 1420992_at	9269	0.475	-0.0628	No
72	VIM	1438118_x_at 1450641_at 1456292_a_at	9483	0.453	-0.0708	No
73	GPD1	1416204_at 1439396_x_at 1448249_at 1456732_at	9751	0.426	-0.0813	No
74	TLL2	1421526_at	9785	0.423	-0.0811	No
75	HOXC6	1427361_at 1427362_x_at 1427454_at	10057	0.396	-0.0920	No
76	MAMDC1	1442206_at 1442561_at 1445372_at 1458147_at	10078	0.394	-0.0913	No
77	DNM3	1425403_at 1436624_at 1436875_at 1438801_at 1445540_at 1446265_at 1446431_at 1446694_at 1457405_at	10591	0.346	-0.1135	No
78	COL4A2	1424051_at	10611	0.344	-0.1129	No
79	MRPS31	1417737_at 1443165_at	10624	0.343	-0.1121	No
80	MYOD1	1418420_at 1447675_x_at	10632	0.343	-0.1110	No
81	LUZP1	1416469_at 1448352_at	10797	0.325	-0.1173	No
82	FGF4	1420085_at 1420086_x_at 1449729_at 1450282_at	10997	0.308	-0.1252	No
83	LMO3	1455754_at	11071	0.302	-0.1273	No
84	ANK3	1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at	11235	0.288	-0.1336	No
85	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	11358	0.274	-0.1381	No
86	PGF	1418471_at	11545	0.255	-0.1457	No
87	ARNT	1419996_s_at 1421721_a_at 1425064_at 1437042_at 1449696_at	11554	0.254	-0.1450	No
88	GTF2A1	1421357_at	11616	0.248	-0.1468	No
89	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	11620	0.248	-0.1459	No
90	TNNT2	1418726_a_at 1424967_x_at 1440424_at	11626	0.247	-0.1452	No
91	MMP13	1417256_at	11844	0.223	-0.1542	No
92	NOTCH2	1451889_at 1455556_at	12059	0.203	-0.1633	No
93	PAX6	1419271_at 1425960_s_at 1437816_at 1452526_a_at 1456342_at	12224	0.189	-0.1700	No
94	POU2F1	1419716_a_at 1427695_a_at 1427835_at	12497	0.165	-0.1819	No
95	MATN1	1418477_at	12515	0.163	-0.1820	No
96	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	12518	0.163	-0.1814	No
97	ITGA10	1440235_at	12646	0.151	-0.1867	No
98	PDZRN4	1456512_at	13124	0.103	-0.2082	No
99	MKRN3	1418160_at	13305	0.081	-0.2161	No
100	BTG4	1426520_at	13389	0.072	-0.2196	No
101	SCN8A	1423515_at 1439889_at 1442208_at 1451894_a_at 1457412_at 1458693_at	13801	0.028	-0.2384	No
102	IBRDC3	1432478_a_at 1435226_at	13812	0.026	-0.2388	No
103	ADAMTS8	1418270_at 1444174_at	13849	0.023	-0.2403	No
104	RDH5	1418808_at 1421702_at	13922	0.016	-0.2436	No
105	SNX1	1416260_a_at	14040	0.003	-0.2489	No
106	ITGB7	1418741_at	14051	0.001	-0.2494	No
107	NGB	1417996_at 1417997_at	14564	-0.061	-0.2727	No
108	CTSK	1450652_at	14717	-0.081	-0.2793	No
109	RGS1	1417601_at	14869	-0.100	-0.2859	No
110	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	14923	-0.106	-0.2879	No
111	GRK5	1446361_at 1446998_at 1449514_at	15166	-0.138	-0.2985	No
112	NAV3	1459440_at	15554	-0.197	-0.3155	No
113	GZMB	1419060_at	15609	-0.206	-0.3171	No
114	ABCD4	1419572_a_at 1427829_at	15925	-0.258	-0.3305	No
115	AP1G2	1419113_at	16047	-0.281	-0.3350	No
116	RICS	1438451_at 1447099_at	16054	-0.282	-0.3341	No
117	BATF	1419410_at	16060	-0.283	-0.3332	No
118	CBL	1434829_at 1446608_at 1450457_at 1455886_at	16402	-0.349	-0.3475	No
119	GRASP	1441894_s_at 1442616_at 1460206_at	16431	-0.355	-0.3473	No
120	SCNN1A	1425088_at	16640	-0.402	-0.3553	No
121	COL9A2	1450673_at	17037	-0.503	-0.3714	No
122	TACSTD2	1423323_at	17111	-0.524	-0.3727	No
123	EIF3S1	1426394_at 1426395_s_at 1452052_s_at	17454	-0.623	-0.3859	Yes
124	SEMA4A	1438934_x_at 1448110_at	17458	-0.625	-0.3835	Yes
125	SCN2B	1430648_at 1436134_at 1457144_at	17467	-0.629	-0.3813	Yes
126	SFRS4	1448778_at	17506	-0.644	-0.3805	Yes
127	MR1	1421898_a_at 1421899_a_at	17588	-0.671	-0.3815	Yes
128	NHLRC2	1429145_at 1433929_at 1444863_at 1453048_at 1457312_at	17631	-0.682	-0.3806	Yes
129	TACC2	1425745_a_at 1447891_at	17726	-0.707	-0.3821	Yes
130	GPATC2	1420528_at 1440329_s_at 1445189_at 1452498_at 1458566_at	17770	-0.721	-0.3812	Yes
131	DIABLO	1417683_at 1425768_at	17822	-0.743	-0.3805	Yes
132	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	18009	-0.809	-0.3858	Yes
133	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	18083	-0.838	-0.3858	Yes
134	ENTPD1	1423326_at 1450939_at 1453586_at	18093	-0.842	-0.3828	Yes
135	ATF7IP	1446323_at 1449192_at 1454973_at 1459096_at	18107	-0.846	-0.3799	Yes
136	NRAS	1422688_a_at 1454060_a_at	18126	-0.853	-0.3773	Yes
137	MIZF	1440255_at	18129	-0.854	-0.3740	Yes
138	BCAR3	1415936_at 1431564_at	18262	-0.899	-0.3764	Yes
139	CAP1	1417461_at 1417462_at	18444	-0.963	-0.3808	Yes
140	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	18635	-1.019	-0.3854	Yes
141	BMF	1422995_at 1454880_s_at 1458325_x_at	18712	-1.042	-0.3847	Yes
142	EDARADD	1421213_at 1433132_at 1433133_at 1437800_at	18800	-1.080	-0.3844	Yes
143	HIPK1	1421298_a_at 1424540_at 1457515_at	18816	-1.083	-0.3807	Yes
144	STAT2	1421911_at 1450403_at	18822	-1.088	-0.3765	Yes
145	NRXN3	1419825_at 1431153_at 1432931_at 1433788_at 1438193_at 1439629_at 1442423_at 1444700_at 1456137_at 1460101_at	18831	-1.093	-0.3725	Yes
146	LCK	1425396_a_at 1439145_at 1439146_s_at 1457917_at	18832	-1.093	-0.3680	Yes
147	TCF12	1421908_a_at 1427670_a_at 1438762_at 1439209_at 1439619_at 1443012_at 1444620_at 1445093_at 1445133_at 1457524_at 1458337_at	18948	-1.141	-0.3687	Yes
148	WNT8B	1421439_at	18963	-1.152	-0.3647	Yes
149	LY9	1449156_at	19057	-1.193	-0.3642	Yes
150	PTPN22	1417995_at 1442820_at	19069	-1.197	-0.3598	Yes
151	SLC37A4	1417042_at	19083	-1.203	-0.3556	Yes
152	RHOG	1422572_at	19084	-1.203	-0.3507	Yes
153	ACIN1	1416568_a_at 1421197_a_at	19117	-1.226	-0.3472	Yes
154	ARHGAP21	1428368_at 1428369_s_at 1445628_at 1447206_at	19166	-1.249	-0.3444	Yes
155	TPM1	1423049_a_at 1423721_at 1447713_at 1456623_at	19248	-1.291	-0.3429	Yes
156	BLOC1S1	1422614_s_at	19381	-1.367	-0.3434	Yes
157	PACS1	1420112_at 1435762_at 1440014_at 1449737_at 1459707_at	19604	-1.502	-0.3476	Yes
158	MAP3K11	1450669_at	19775	-1.630	-0.3488	Yes
159	EIF2C1	1434331_at	19851	-1.684	-0.3454	Yes
160	DNAJC14	1426553_at 1437546_at 1437547_s_at	20160	-1.939	-0.3518	Yes
161	XCL1	1419412_at	20213	-1.978	-0.3462	Yes
162	SLC12A6	1436989_s_at 1449878_a_at 1458916_at	20232	-1.990	-0.3389	Yes
163	HIVEP3	1421150_at 1429134_at 1439660_at 1450132_at 1458802_at	20393	-2.092	-0.3378	Yes
164	RASGEF1A	1429316_at 1435218_at	20436	-2.138	-0.3311	Yes
165	FLI1	1422024_at 1433512_at 1441584_at	20634	-2.375	-0.3306	Yes
166	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	20699	-2.442	-0.3237	Yes
167	BLOC1S2	1429048_at	20739	-2.498	-0.3154	Yes
168	NFRKB	1434753_at 1445551_at	20817	-2.610	-0.3084	Yes
169	PDE3B	1433694_at	20971	-2.853	-0.3039	Yes
170	UBL3	1423461_a_at	20998	-2.900	-0.2933	Yes
171	MADD	1425735_at 1455502_at	21006	-2.926	-0.2818	Yes
172	DACT1	1417937_at	21253	-3.502	-0.2790	Yes
173	CD69	1428735_at	21570	-4.845	-0.2739	Yes
174	RORC	1425792_a_at 1425793_a_at	21670	-5.593	-0.2559	Yes
175	CRY1	1433733_a_at	21708	-5.979	-0.2334	Yes
176	SLC37A2	1452492_a_at	21766	-6.640	-0.2092	Yes
177	DGKA	1418578_at	21789	-6.975	-0.1820	Yes
178	NR4A1	1416505_at	21809	-7.139	-0.1541	Yes
179	ID3	1416630_at	21832	-7.406	-0.1251	Yes
180	RAG1	1440574_at 1450680_at	21864	-7.714	-0.0954	Yes
181	CD6	1451910_a_at	21913	-8.067	-0.0650	Yes
182	S100A9	1448756_at	21916	-8.114	-0.0323	Yes
183	EGR2	1427682_a_at 1427683_at	21921	-8.208	0.0007	Yes