Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
Upregulated in class | SCID |
GeneSet | SGCGSSAAA_V$E2F1DP2_01 |
Enrichment Score (ES) | 0.42554796 |
Normalized Enrichment Score (NES) | 1.6468104 |
Nominal p-value | 0.0 |
FDR q-value | 0.10684073 |
FWER p-Value | 0.3 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | POLR2A | 1422311_a_at 1426242_at 1458710_at | 154 | 5.273 | 0.0191 | Yes | ||
2 | NOLC1 | 1428869_at 1428870_at 1450087_a_at | 157 | 5.258 | 0.0450 | Yes | ||
3 | CDC6 | 1417019_a_at | 179 | 5.023 | 0.0690 | Yes | ||
4 | MCM6 | 1416251_at 1438852_x_at 1447756_x_at | 182 | 5.000 | 0.0937 | Yes | ||
5 | GMNN | 1417506_at | 184 | 4.969 | 0.1182 | Yes | ||
6 | SNRPD1 | 1416336_s_at | 243 | 4.511 | 0.1379 | Yes | ||
7 | CLSPN | 1441984_at 1456280_at | 305 | 4.093 | 0.1554 | Yes | ||
8 | UNG | 1425753_a_at | 393 | 3.740 | 0.1700 | Yes | ||
9 | POLD1 | 1448187_at 1456055_x_at | 413 | 3.679 | 0.1873 | Yes | ||
10 | RANBP1 | 1422547_at | 490 | 3.453 | 0.2010 | Yes | ||
11 | RQCD1 | 1450887_at | 578 | 3.231 | 0.2130 | Yes | ||
12 | PHF5A | 1424170_at | 640 | 3.083 | 0.2255 | Yes | ||
13 | TOPBP1 | 1452241_at 1458480_at | 680 | 2.980 | 0.2385 | Yes | ||
14 | DNAJC9 | 1426473_at | 744 | 2.841 | 0.2496 | Yes | ||
15 | HMGA1 | 1416184_s_at | 769 | 2.805 | 0.2624 | Yes | ||
16 | MCM2 | 1434079_s_at 1448777_at | 864 | 2.652 | 0.2713 | Yes | ||
17 | MXD3 | 1422970_at 1438847_at 1448878_at | 880 | 2.625 | 0.2836 | Yes | ||
18 | YBX2 | 1420762_a_at | 914 | 2.565 | 0.2948 | Yes | ||
19 | ATF5 | 1425927_a_at | 927 | 2.543 | 0.3069 | Yes | ||
20 | ACO2 | 1436934_s_at 1442102_at 1451002_at | 1096 | 2.321 | 0.3107 | Yes | ||
21 | MCM7 | 1416030_a_at 1416031_s_at 1438320_s_at | 1113 | 2.307 | 0.3214 | Yes | ||
22 | SUV39H1 | 1427382_a_at 1432227_at 1432236_a_at | 1174 | 2.230 | 0.3297 | Yes | ||
23 | AP1S1 | 1416087_at | 1178 | 2.228 | 0.3406 | Yes | ||
24 | SLC9A5 | 1420070_a_at 1455760_at | 1189 | 2.218 | 0.3511 | Yes | ||
25 | HIRA | 1436241_s_at 1450049_a_at 1450050_at 1459103_at | 1200 | 2.206 | 0.3616 | Yes | ||
26 | POLE4 | 1423371_at 1423372_at 1432286_at 1444739_at | 1211 | 2.198 | 0.3720 | Yes | ||
27 | FKBP5 | 1416125_at 1447736_at 1448231_at 1458089_at | 1281 | 2.143 | 0.3795 | Yes | ||
28 | MYC | 1424942_a_at | 1314 | 2.118 | 0.3885 | Yes | ||
29 | POLD3 | 1426838_at 1426839_at 1443733_x_at 1459647_at | 1340 | 2.099 | 0.3978 | Yes | ||
30 | MRPL40 | 1448849_at | 1386 | 2.068 | 0.4059 | Yes | ||
31 | NCL | 1415771_at 1415772_at 1415773_at 1442404_at 1456528_x_at | 1775 | 1.859 | 0.3974 | Yes | ||
32 | PCSK1 | 1421396_at | 1892 | 1.786 | 0.4009 | Yes | ||
33 | SYNGR4 | 1418875_at | 2023 | 1.710 | 0.4034 | Yes | ||
34 | CDCA7 | 1428069_at 1445681_at | 2034 | 1.706 | 0.4114 | Yes | ||
35 | PRPS1 | 1416052_at | 2163 | 1.639 | 0.4137 | Yes | ||
36 | NASP | 1416042_s_at 1416043_at 1440328_at 1442728_at | 2179 | 1.627 | 0.4211 | Yes | ||
37 | AK2 | 1448450_at 1448451_at | 2254 | 1.592 | 0.4255 | Yes | ||
38 | RRM2 | 1416120_at 1434437_x_at 1448226_at | 2434 | 1.506 | 0.4248 | No | ||
39 | RET | 1421359_at | 2630 | 1.426 | 0.4229 | No | ||
40 | MSH5 | 1430771_a_at 1449537_at | 2749 | 1.388 | 0.4244 | No | ||
41 | ZBTB4 | 1429722_at 1460488_at | 3591 | 1.168 | 0.3917 | No | ||
42 | PAQR4 | 1423101_at | 3598 | 1.166 | 0.3972 | No | ||
43 | PKMYT1 | 1418481_at 1438601_at | 3669 | 1.152 | 0.3997 | No | ||
44 | FANCC | 1442265_at 1447632_at 1450861_at | 3977 | 1.099 | 0.3910 | No | ||
45 | POLE2 | 1427094_at 1431440_at | 4567 | 1.013 | 0.3691 | No | ||
46 | HNRPD | 1425142_a_at 1446083_at | 4634 | 1.006 | 0.3710 | No | ||
47 | SFRS7 | 1424033_at 1424883_s_at 1436871_at | 4848 | 0.983 | 0.3661 | No | ||
48 | STK35 | 1431107_at 1439802_at | 5291 | 0.925 | 0.3505 | No | ||
49 | KCNS2 | 1421342_at 1441211_at 1457325_at | 5474 | 0.899 | 0.3466 | No | ||
50 | MCM4 | 1416214_at 1436708_x_at | 5554 | 0.888 | 0.3474 | No | ||
51 | FHOD1 | 1435557_at | 5854 | 0.848 | 0.3379 | No | ||
52 | ATAD2 | 1436174_at 1443146_at 1443229_at | 5878 | 0.845 | 0.3410 | No | ||
53 | HTF9C | 1434244_x_at 1441920_x_at 1448114_a_at 1448115_at 1453995_a_at 1457620_at | 6042 | 0.827 | 0.3376 | No | ||
54 | TYRO3 | 1425248_a_at 1425249_a_at | 6450 | 0.774 | 0.3228 | No | ||
55 | GLRA3 | 1450239_at | 6638 | 0.752 | 0.3179 | No | ||
56 | PCNA | 1417947_at | 6659 | 0.750 | 0.3207 | No | ||
57 | H2AFZ | 1441370_at | 6710 | 0.743 | 0.3221 | No | ||
58 | RAVER1 | 1427110_at 1427111_s_at 1444966_at | 6792 | 0.736 | 0.3221 | No | ||
59 | AP4M1 | 1418846_at | 6908 | 0.721 | 0.3204 | No | ||
60 | ING3 | 1422805_a_at 1422806_x_at 1450760_a_at 1460082_at | 6975 | 0.714 | 0.3209 | No | ||
61 | E2F1 | 1417878_at 1431875_a_at 1447840_x_at | 7270 | 0.679 | 0.3108 | No | ||
62 | KCNA6 | 1421568_at 1441049_at 1456954_at | 7455 | 0.656 | 0.3056 | No | ||
63 | ILF3 | 1422546_at 1436802_at 1460669_at | 8047 | 0.595 | 0.2815 | No | ||
64 | E2F3 | 1427462_at 1434564_at | 8495 | 0.550 | 0.2637 | No | ||
65 | MYH10 | 1441057_at 1452740_at | 8520 | 0.547 | 0.2653 | No | ||
66 | FANCG | 1420960_at | 9432 | 0.458 | 0.2258 | No | ||
67 | EFNA5 | 1421796_a_at 1436866_at 1440052_at 1446383_at 1451930_at | 9868 | 0.416 | 0.2080 | No | ||
68 | RPS20 | 1456373_x_at 1456436_x_at | 10099 | 0.392 | 0.1994 | No | ||
69 | GABRB3 | 1421189_at 1421190_at 1435021_at | 10710 | 0.335 | 0.1731 | No | ||
70 | MAZ | 1427099_at | 11722 | 0.237 | 0.1279 | No | ||
71 | SFRS10 | 1419543_a_at 1427432_a_at 1441466_at 1446496_at | 11955 | 0.213 | 0.1183 | No | ||
72 | NRK | 1436399_s_at 1450078_at 1450079_at | 12087 | 0.201 | 0.1133 | No | ||
73 | HNRPR | 1427129_a_at 1438807_at 1452030_a_at | 12145 | 0.196 | 0.1117 | No | ||
74 | HOXC10 | 1439798_at | 12216 | 0.190 | 0.1094 | No | ||
75 | PTMA | 1423455_at | 12741 | 0.143 | 0.0861 | No | ||
76 | ARHGAP6 | 1417704_a_at 1451867_x_at 1456333_a_at | 12893 | 0.127 | 0.0798 | No | ||
77 | NR6A1 | 1421515_at 1421516_at 1428825_at 1428826_at 1445872_at | 13153 | 0.100 | 0.0684 | No | ||
78 | CSPG2 | 1421694_a_at 1427256_at 1427257_at 1433043_at 1433044_at 1447586_at 1447887_x_at 1459767_x_at | 13424 | 0.068 | 0.0564 | No | ||
79 | PHF15 | 1430081_at 1455345_at | 13491 | 0.061 | 0.0537 | No | ||
80 | ACBD6 | 1452601_a_at 1453199_at | 13586 | 0.050 | 0.0496 | No | ||
81 | SYNCRIP | 1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at | 14134 | -0.009 | 0.0246 | No | ||
82 | PODN | 1435180_at | 14274 | -0.025 | 0.0183 | No | ||
83 | MSH2 | 1416988_at 1447888_x_at | 15547 | -0.196 | -0.0390 | No | ||
84 | FMO4 | 1425799_at 1444852_at | 15598 | -0.204 | -0.0403 | No | ||
85 | CASP8AP2 | 1449217_at | 16514 | -0.373 | -0.0804 | No | ||
86 | SFRS1 | 1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at | 16974 | -0.491 | -0.0990 | No | ||
87 | CDC25A | 1417131_at 1417132_at 1445995_at | 17039 | -0.504 | -0.0994 | No | ||
88 | GPRC5B | 1424613_at 1451411_at | 17285 | -0.575 | -0.1078 | No | ||
89 | PLAGL1 | 1426208_x_at 1438588_at 1450533_a_at | 17451 | -0.622 | -0.1122 | No | ||
90 | GATA1 | 1449232_at | 17513 | -0.648 | -0.1118 | No | ||
91 | PRKDC | 1451576_at | 17670 | -0.693 | -0.1155 | No | ||
92 | EED | 1448653_at | 17850 | -0.755 | -0.1200 | No | ||
93 | PPM1D | 1434142_at 1449092_at 1459069_at | 17915 | -0.774 | -0.1191 | No | ||
94 | ADAMTS2 | 1435990_at 1455720_at 1457058_at | 18037 | -0.823 | -0.1206 | No | ||
95 | HCN3 | 1451023_at | 18115 | -0.847 | -0.1199 | No | ||
96 | FBXO5 | 1429499_at | 18355 | -0.930 | -0.1262 | No | ||
97 | USP37 | 1434242_at 1438212_at | 18578 | -1.001 | -0.1315 | No | ||
98 | USP52 | 1426700_a_at | 19020 | -1.177 | -0.1458 | No | ||
99 | BRMS1L | 1452850_s_at 1460443_at | 19085 | -1.203 | -0.1428 | No | ||
100 | PHC1 | 1423212_at | 19196 | -1.261 | -0.1416 | No | ||
101 | ALDH6A1 | 1448104_at | 19447 | -1.406 | -0.1461 | No | ||
102 | ASXL2 | 1439063_at 1444754_at 1453295_at 1458366_at 1460597_at | 19448 | -1.408 | -0.1391 | No | ||
103 | H2AFV | 1428029_a_at 1436596_at | 19457 | -1.415 | -0.1325 | No | ||
104 | PRPF4B | 1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at | 19505 | -1.448 | -0.1274 | No | ||
105 | HNRPUL1 | 1451984_at | 19530 | -1.468 | -0.1213 | No | ||
106 | UGCGL1 | 1432318_at 1448009_at 1455839_at | 20178 | -1.953 | -0.1412 | No | ||
107 | IL4I1 | 1419192_at | 20344 | -2.050 | -0.1386 | No | ||
108 | ZCCHC8 | 1423755_at 1441639_at | 20345 | -2.051 | -0.1285 | No | ||
109 | DNMT1 | 1422946_a_at 1435122_x_at 1445637_at 1447877_x_at | 20497 | -2.200 | -0.1245 | No | ||
110 | DCK | 1428838_a_at 1439012_a_at 1449176_a_at | 20506 | -2.207 | -0.1139 | No | ||
111 | PIM1 | 1423006_at 1435458_at | 20778 | -2.545 | -0.1137 | No | ||
112 | STAG2 | 1421849_at 1450396_at | 21067 | -3.048 | -0.1118 | No | ||
113 | TRIM39 | 1418851_at | 21349 | -3.809 | -0.1058 | No | ||
114 | KBTBD7 | 1428192_at 1439865_at 1452700_s_at | 21590 | -5.042 | -0.0918 | No | ||
115 | MCM3 | 1420029_at 1426653_at | 21738 | -6.271 | -0.0675 | No | ||
116 | ID3 | 1416630_at | 21832 | -7.406 | -0.0350 | No | ||
117 | NUP62 | 1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at | 21911 | -8.023 | 0.0011 | No |