Details for gene set CGTSACG_V$PAX3

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	CGTSACG_V$PAX3_B
Enrichment Score (ES)	-0.4493487
Normalized Enrichment Score (NES)	-1.6687561
Nominal p-value	0.0017035775
FDR q-value	0.10221206
FWER p-Value	0.325

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CDKN1A	1421679_a_at 1424638_at	161	5.189	0.0241	No
2	PCNP	1428314_at 1452735_at	386	3.753	0.0366	No
3	RBBP8	1427061_at 1427062_at 1446097_at	1039	2.403	0.0213	No
4	TAF11	1446161_at 1451995_at	1115	2.306	0.0318	No
5	MRRF	1426364_at	1284	2.140	0.0371	No
6	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	1394	2.059	0.0446	No
7	ELOVL5	1415840_at 1437211_x_at 1459242_at	1419	2.044	0.0558	No
8	DHX36	1424397_at 1424398_at 1437550_at	1503	2.001	0.0642	No
9	BCL11B	1440137_at 1441762_at 1450339_a_at	1772	1.860	0.0632	No
10	HMGN1	1422495_a_at 1422496_at 1438940_x_at 1455897_x_at	1827	1.828	0.0718	No
11	PEPD	1416712_at	1875	1.796	0.0805	No
12	EPC1	1418850_at 1429914_at 1440198_at 1440742_at 1442279_at 1443675_at 1458315_at	2019	1.711	0.0843	No
13	SULT4A1	1421606_a_at 1433714_at	2058	1.694	0.0928	No
14	SLC25A3	1416300_a_at 1440302_at	2088	1.675	0.1017	No
15	NKX2-3	1425827_at 1427741_x_at 1452528_a_at	2199	1.619	0.1064	No
16	NDUFB2	1416834_x_at 1442658_at 1448483_a_at 1453806_at	2308	1.563	0.1110	No
17	FOXD3	1422210_at	2547	1.454	0.1089	No
18	PIAS4	1418861_at 1455394_at	3080	1.289	0.0923	No
19	PB1	1426877_a_at 1426878_at 1427266_at 1442603_at	3174	1.261	0.0957	No
20	RAD51C	1423026_at 1438453_at	3501	1.187	0.0880	No
21	RBM18	1420607_at 1420608_at 1458182_at	3590	1.168	0.0910	No
22	STXBP1	1420505_a_at 1420506_a_at	3613	1.163	0.0971	No
23	SLC6A12	1449382_at	3751	1.140	0.0977	No
24	TNRC15	1439837_at 1446275_at 1451856_at 1457472_at	3984	1.097	0.0937	No
25	TEX14	1419240_at	4373	1.036	0.0822	No
26	EHD4	1449852_a_at	4436	1.027	0.0856	No
27	SUPT16H	1419741_at 1449578_at 1456449_at	4446	1.026	0.0914	No
28	HOXA9	1421579_at 1455626_at	4676	1.002	0.0870	No
29	SMARCA5	1440048_at	4750	0.995	0.0897	No
30	PPM2C	1434228_at 1438201_at	5054	0.959	0.0816	No
31	RASD1	1423619_at	5939	0.838	0.0462	No
32	KCNE4	1418156_at	5999	0.832	0.0486	No
33	BHLHB2	1418025_at	6240	0.800	0.0424	No
34	EIF4E	1450909_at 1457489_at 1459371_at	6449	0.774	0.0376	No
35	ADAM10	1450104_at 1460083_at	6631	0.753	0.0338	No
36	TSPYL5	1455807_at	6743	0.740	0.0332	No
37	IRX6	1427383_at	7918	0.609	-0.0168	No
38	CX36	1423019_at 1435297_at	7924	0.608	-0.0134	No
39	RNF146	1417733_at 1425001_at 1425713_a_at	8124	0.586	-0.0189	No
40	GGA1	1423834_s_at 1459863_x_at	8848	0.516	-0.0489	No
41	MASTL	1423524_at 1423525_at 1444725_at 1447136_at	9207	0.479	-0.0624	No
42	PITX2	1424797_a_at 1450482_a_at	9912	0.411	-0.0922	No
43	PLK2	1427005_at	10313	0.373	-0.1082	No
44	EN2	1418868_at	11180	0.293	-0.1461	No
45	SLC38A2	1426722_at 1429593_at 1429594_at	11476	0.263	-0.1580	No
46	SOAT1	1417695_a_at 1417696_at 1417697_at 1426818_at 1448068_at	11491	0.262	-0.1571	No
47	GNAS	1421740_at 1427789_s_at 1443007_at 1443375_at 1444767_at 1450186_s_at 1453413_at	11745	0.234	-0.1673	No
48	NRK	1436399_s_at 1450078_at 1450079_at	12087	0.201	-0.1817	No
49	HOXC10	1439798_at	12216	0.190	-0.1864	No
50	EGR4	1449977_at	12420	0.171	-0.1946	No
51	TRIB1	1424880_at 1424881_at	12443	0.169	-0.1946	No
52	PTMA	1423455_at	12741	0.143	-0.2073	No
53	CHGB	1415885_at	13199	0.094	-0.2277	No
54	ANKHD1	1419867_a_at 1436597_at 1440754_at 1441597_at 1442641_at 1448008_at 1453023_at 1455759_a_at	13400	0.071	-0.2364	No
55	MAB21L1	1421369_a_at 1424679_at 1440860_at 1457290_at	13599	0.049	-0.2452	No
56	IPO7	1442511_at 1454955_at 1458165_at	13657	0.044	-0.2476	No
57	NEUROD2	1444362_at	13788	0.029	-0.2533	No
58	PPP1R3D	1452922_at	14035	0.003	-0.2646	No
59	ZZZ3	1434332_at 1438487_s_at 1441748_at	14101	-0.004	-0.2675	No
60	GTF2H1	1453169_a_at	14164	-0.012	-0.2703	No
61	CDC14B	1429418_at 1437070_at	14340	-0.032	-0.2781	No
62	NOL4	1430189_at 1441447_at 1456387_at	14509	-0.055	-0.2855	No
63	PNRC1	1433668_at 1438524_x_at 1439513_at	15263	-0.153	-0.3190	No
64	PHACTR3	1429651_at	15325	-0.162	-0.3209	No
65	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	15406	-0.175	-0.3235	No
66	AP2B1	1427077_a_at 1445142_at 1446566_at 1452292_at 1458971_at	15683	-0.217	-0.3348	No
67	RAB7	1415734_at 1448159_at	15765	-0.228	-0.3371	No
68	PTPN23	1427128_at	16343	-0.337	-0.3615	No
69	USP8	1422883_at 1443420_at 1446807_at 1447386_at	16426	-0.353	-0.3631	No
70	BRAF	1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at	16748	-0.432	-0.3752	No
71	BCL11A	1419406_a_at 1426552_a_at 1446293_at 1447334_at 1447335_x_at 1453814_at 1456632_at	16815	-0.447	-0.3755	No
72	ZFHX1B	1422748_at 1434298_at 1442393_at 1445518_at 1454200_at 1456389_at	17050	-0.506	-0.3832	No
73	CASK	1422518_at 1422519_at 1427692_a_at 1445152_at	17210	-0.551	-0.3871	No
74	PPP2R1A	1415819_a_at 1438174_x_at 1438383_x_at 1438991_x_at 1455929_x_at	17329	-0.587	-0.3890	No
75	CUL5	1428287_at 1452722_a_at 1456102_a_at	17616	-0.679	-0.3979	No
76	GEM	1426063_a_at	17669	-0.693	-0.3961	No
77	HMOX2	1416399_a_at	17689	-0.698	-0.3928	No
78	RAD9A	1418404_at	18055	-0.831	-0.4044	No
79	HPS5	1434677_at	18399	-0.944	-0.4144	No
80	CANX	1415692_s_at 1422845_at 1428935_at	18968	-1.156	-0.4334	No
81	HTATIP	1433980_at 1433981_s_at	19053	-1.191	-0.4301	No
82	SLC18A2	1437079_at	19475	-1.425	-0.4407	Yes
83	WDR23	1448418_s_at 1460189_at	19537	-1.472	-0.4346	Yes
84	SMARCE1	1422675_at 1422676_at 1430822_at	19764	-1.620	-0.4351	Yes
85	CBX6	1424407_s_at 1429290_at	19821	-1.663	-0.4276	Yes
86	PPT2	1418302_at	20127	-1.907	-0.4300	Yes
87	IKBKB	1426207_at 1426333_a_at 1432275_at 1445141_at 1454184_a_at	20388	-2.086	-0.4293	Yes
88	POLB	1425371_at 1434229_a_at	20420	-2.119	-0.4179	Yes
89	CTCF	1418330_at 1449042_at	20645	-2.384	-0.4137	Yes
90	YME1L1	1423360_at 1423361_at 1437822_at 1450954_at	20652	-2.394	-0.3994	Yes
91	WSB1	1425241_a_at	21123	-3.169	-0.4018	Yes
92	ZZEF1	1434192_at 1438691_at 1446081_at 1453583_at	21407	-4.014	-0.3904	Yes
93	PAK2	1434250_at 1454887_at	21587	-4.997	-0.3683	Yes
94	EDEM1	1424065_at 1451218_at	21594	-5.067	-0.3379	Yes
95	RELB	1417856_at	21596	-5.083	-0.3071	Yes
96	CRY1	1433733_a_at	21708	-5.979	-0.2760	Yes
97	NR4A1	1416505_at	21809	-7.139	-0.2373	Yes
98	NAB2	1417930_at	21843	-7.510	-0.1933	Yes
99	NR4A2	1447863_s_at 1450749_a_at 1450750_a_at 1455034_at	21861	-7.700	-0.1474	Yes
100	EGR2	1427682_a_at 1427683_at	21921	-8.208	-0.1004	Yes
101	EGR3	1421486_at 1436329_at	21923	-8.252	-0.0504	Yes
102	EGR1	1417065_at	21931	-8.413	0.0002	Yes