Details for gene set UV-CMV_UNIQUE_HCMV_6HRS

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	UV-CMV_UNIQUE_HCMV_6HRS_UP
Enrichment Score (ES)	-0.5464862
Normalized Enrichment Score (NES)	-1.9568374
Nominal p-value	0.0
FDR q-value	0.0118586365
FWER p-Value	0.137

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CHEK2	1422747_at	365	3.836	0.0085	No
2	RQCD1	1450887_at	578	3.231	0.0201	No
3	UBE2S	1416726_s_at 1430962_at	1103	2.316	0.0113	No
4	MX2	1419676_at	1129	2.284	0.0252	No
5	TRADD	1429117_at 1439910_a_at 1452622_a_at	1160	2.241	0.0386	No
6	PTTG1	1419620_at 1424105_a_at 1438390_s_at	1195	2.213	0.0516	No
7	NP	1416530_a_at	2106	1.668	0.0209	No
8	ACTL6B	1422564_at	2269	1.583	0.0239	No
9	AREG	1421134_at	2526	1.463	0.0218	No
10	PIK3R3	1445097_at 1447068_at 1456482_at	2977	1.318	0.0099	No
11	BRCA2	1419076_a_at	3648	1.156	-0.0132	No
12	CH25H	1449227_at	4422	1.030	-0.0418	No
13	MEF2C	1421027_a_at 1421028_a_at 1424852_at 1439946_at 1445420_at 1446484_at 1451506_at 1451507_at 1458551_at	4473	1.023	-0.0374	No
14	TLR3	1422781_at 1422782_s_at	4575	1.012	-0.0353	No
15	TREX1	1450672_a_at 1459618_at	4585	1.011	-0.0291	No
16	STX11	1423576_a_at 1451032_at 1453228_at 1457780_at	4587	1.011	-0.0225	No
17	HBEGF	1418349_at 1418350_at	4924	0.976	-0.0315	No
18	DPT	1418511_at	5207	0.936	-0.0382	No
19	CRYGD	1419141_at	5528	0.892	-0.0470	No
20	IL1RAP	1421843_at 1439697_at 1442614_at 1449585_at	5971	0.835	-0.0617	No
21	RGS6	1427340_at 1452399_at	6571	0.759	-0.0842	No
22	CCL8	1419684_at	6602	0.756	-0.0805	No
23	TNFAIP3	1433699_at 1450829_at	6966	0.715	-0.0925	No
24	ADAMTS3	1441693_at 1458143_at	7080	0.701	-0.0930	No
25	AGTPBP1	1429933_at 1432385_a_at	7107	0.698	-0.0896	No
26	INDO	1420437_at	8341	0.567	-0.1423	No
27	PDE1A	1431625_at 1449298_a_at	8453	0.555	-0.1438	No
28	EPHA5	1420557_at 1437920_at 1444690_at	9318	0.469	-0.1802	No
29	OAS2	1425065_at	9664	0.434	-0.1932	No
30	RABGAP1L	1421488_at 1429196_at 1429197_s_at 1434062_at 1441202_at 1453365_at 1457178_at 1458155_at	10130	0.390	-0.2119	No
31	IGFBP2	1454159_a_at	10729	0.332	-0.2371	No
32	ICAM1	1424067_at	12150	0.196	-0.3008	No
33	ELN	1420854_at 1420855_at 1446221_at	12259	0.186	-0.3045	No
34	TROVE2	1423433_at 1436533_at 1436534_at 1436535_at	12462	0.167	-0.3127	No
35	TAC1	1416783_at 1419411_at 1431883_at	12659	0.150	-0.3206	No
36	PLA2G4A	1448558_a_at	12813	0.137	-0.3267	No
37	PCDH9	1439322_at 1442659_at 1444215_at 1444724_at 1445052_at 1445061_at 1457973_at	12927	0.124	-0.3311	No
38	EGFR	1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at	13105	0.105	-0.3385	No
39	CPEB3	1437765_at 1445868_at 1455372_at 1456048_at	13415	0.069	-0.3522	No
40	COL9A3	1420280_x_at 1460693_a_at 1460734_at	13617	0.047	-0.3611	No
41	GALNT3	1417588_at	13948	0.013	-0.3761	No
42	CCL5	1418126_at	14078	-0.001	-0.3820	No
43	NFKB2	1425902_a_at 1429128_x_at	14195	-0.015	-0.3872	No
44	MYD88	1419272_at	14240	-0.021	-0.3891	No
45	FGFR3	1421841_at 1425796_a_at	14464	-0.049	-0.3990	No
46	KIF5C	1422945_a_at 1427635_at 1447454_at 1450804_at 1455266_at 1457255_x_at	14513	-0.055	-0.4008	No
47	TNFSF10	1420412_at 1439680_at 1459913_at	14624	-0.069	-0.4054	No
48	TDRD7	1426716_at 1459216_at	14630	-0.070	-0.4052	No
49	IL6	1450297_at	14660	-0.073	-0.4060	No
50	TFEC	1419537_at	14906	-0.104	-0.4166	No
51	FGF2	1449826_a_at	15498	-0.189	-0.4424	No
52	AUTS2	1427293_a_at 1438680_at 1441869_x_at 1442360_at 1443062_at 1443070_at 1443770_x_at 1444069_at 1445307_at 1445469_at 1445538_at 1446849_at 1452379_at 1457139_at 1458592_at 1459338_at	15520	-0.193	-0.4421	No
53	COL15A1	1448755_at	15988	-0.270	-0.4617	No
54	CCL19	1449277_at	16390	-0.347	-0.4777	No
55	CD38	1433741_at 1450136_at	16624	-0.398	-0.4858	No
56	CX3CR1	1450019_at 1450020_at	16876	-0.464	-0.4942	No
57	ING1	1416860_s_at 1433267_at 1448496_a_at 1454534_at	17142	-0.530	-0.5029	No
58	MSX1	1417127_at 1448601_s_at	17320	-0.585	-0.5071	No
59	GEM	1426063_a_at	17669	-0.693	-0.5185	No
60	DOPEY2	1428330_at 1449904_at	17978	-0.795	-0.5274	No
61	BAZ1A	1433599_at 1447930_at	17979	-0.796	-0.5221	No
62	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	18045	-0.825	-0.5197	No
63	SOS1	1421884_at 1421885_at 1421886_at	18257	-0.899	-0.5234	No
64	SAMHD1	1418131_at 1434438_at 1444064_at	18372	-0.935	-0.5225	No
65	PFKFB2	1422090_a_at 1422091_at 1422092_at 1429486_at 1431901_a_at	18596	-1.004	-0.5261	No
66	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	18635	-1.019	-0.5211	No
67	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18671	-1.030	-0.5160	No
68	BAMBI	1423753_at	18760	-1.063	-0.5130	No
69	GTF2B	1438066_at 1451135_at	19091	-1.206	-0.5202	No
70	TNFSF9	1422924_at	19667	-1.554	-0.5363	Yes
71	TAF13	1448707_at	19786	-1.637	-0.5309	Yes
72	IRF4	1421173_at 1421174_at	19973	-1.781	-0.5277	Yes
73	TRIM21	1418077_at 1448940_at	20080	-1.868	-0.5203	Yes
74	PPP1R16B	1425414_at 1455080_at	20187	-1.959	-0.5122	Yes
75	ELF1	1417540_at 1439319_at	20812	-2.600	-0.5237	Yes
76	IRF7	1417244_a_at	21245	-3.481	-0.5206	Yes
77	IER2	1416442_at	21321	-3.698	-0.4997	Yes
78	SOCS1	1440047_at 1450446_a_at	21397	-3.962	-0.4771	Yes
79	CCRK	1422494_s_at	21406	-4.013	-0.4510	Yes
80	DNAJB9	1417191_at	21432	-4.103	-0.4252	Yes
81	DUSP2	1450698_at	21446	-4.159	-0.3984	Yes
82	JUNB	1415899_at	21479	-4.278	-0.3718	Yes
83	RRAD	1422562_at	21490	-4.331	-0.3437	Yes
84	RELB	1417856_at	21596	-5.083	-0.3151	Yes
85	CSTF2	1419644_at 1419645_at 1455523_at	21682	-5.705	-0.2815	Yes
86	CRY1	1433733_a_at	21708	-5.979	-0.2433	Yes
87	ISG20	1419569_a_at	21753	-6.425	-0.2030	Yes
88	CCND2	1416122_at 1416123_at 1416124_at 1430127_a_at 1434745_at 1448229_s_at 1455956_x_at	21869	-7.737	-0.1574	Yes
89	IFI27	1426278_at	21901	-7.917	-0.1068	Yes
90	EGR2	1427682_a_at 1427683_at	21921	-8.208	-0.0536	Yes
91	EGR3	1421486_at 1436329_at	21923	-8.252	0.0006	Yes