Details for gene set PENG_RAPAMYCIN

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	PENG_RAPAMYCIN_DN
Enrichment Score (ES)	0.5191872
Normalized Enrichment Score (NES)	2.1343036
Nominal p-value	0.0
FDR q-value	1.2945656E-4
FWER p-Value	0.0030

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	EBNA1BP2	1428315_at 1437512_x_at 1439898_at 1457668_x_at	14	8.047	0.0271	Yes
2	RAB1A	1416082_at 1448210_at 1457537_at	67	7.175	0.0495	Yes
3	TRIP13	1429294_at 1429295_s_at 1446760_at	118	5.762	0.0671	Yes
4	C1QBP	1448274_at 1455821_x_at	139	5.445	0.0850	Yes
5	GOT2	1417715_a_at 1417716_at	142	5.405	0.1036	Yes
6	HSPE1	1450668_s_at	152	5.276	0.1214	Yes
7	SQLE	1415993_at	226	4.589	0.1339	Yes
8	CCT6A	1423517_at 1455988_a_at	253	4.428	0.1480	Yes
9	SLC7A5	1418326_at	343	3.906	0.1574	Yes
10	LDHB	1416183_a_at 1434499_a_at 1442618_at 1448237_x_at 1455235_x_at	359	3.857	0.1700	Yes
11	EMP3	1417104_at	391	3.744	0.1815	Yes
12	CYC1	1416604_at	392	3.742	0.1944	Yes
13	SDHB	1418005_at	502	3.417	0.2012	Yes
14	GTF2A2	1433528_at	505	3.410	0.2129	Yes
15	SLC1A5	1416629_at 1440379_at	509	3.402	0.2245	Yes
16	EIF3S9	1426674_at	519	3.380	0.2357	Yes
17	CCT5	1417258_at	545	3.312	0.2460	Yes
18	MRPL12	1452048_at	642	3.075	0.2522	Yes
19	PRDX3	1416292_at	644	3.075	0.2628	Yes
20	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	652	3.050	0.2730	Yes
21	CDK4	1422441_x_at	655	3.044	0.2834	Yes
22	NDUFA9	1416663_at	683	2.972	0.2925	Yes
23	AMD1	1448484_at	727	2.884	0.3004	Yes
24	GM2A	1416188_at 1448241_at	736	2.870	0.3100	Yes
25	BCS1L	1451541_at	759	2.821	0.3187	Yes
26	NME1	1424110_a_at 1435277_x_at	803	2.753	0.3262	Yes
27	MORF4L2	1415778_at 1439413_x_at	813	2.737	0.3353	Yes
28	GCN5L2	1422971_at 1422972_s_at 1426783_at	834	2.713	0.3437	Yes
29	SLC3A2	1425364_a_at	871	2.647	0.3512	Yes
30	USP10	1448230_at	906	2.581	0.3586	Yes
31	TGDS	1424526_a_at	917	2.561	0.3669	Yes
32	ATF5	1425927_a_at	927	2.543	0.3753	Yes
33	SLC29A1	1451782_a_at	937	2.532	0.3836	Yes
34	RTCD1	1424095_at	944	2.520	0.3921	Yes
35	NOL1	1424019_at	1000	2.445	0.3980	Yes
36	CTPS	1416563_at	1042	2.398	0.4044	Yes
37	MARS	1455951_at	1057	2.380	0.4120	Yes
38	TUBG1	1417144_at	1062	2.372	0.4200	Yes
39	NOL5A	1426533_at 1455035_s_at	1067	2.361	0.4279	Yes
40	PSMB5	1415676_a_at	1169	2.235	0.4310	Yes
41	RNU3IP2	1451293_at	1190	2.217	0.4377	Yes
42	ETFA	1423972_at	1191	2.216	0.4454	Yes
43	RARS	1416312_at	1316	2.117	0.4470	Yes
44	CYCS	1422484_at 1445484_at	1361	2.084	0.4522	Yes
45	XBP1	1420011_s_at 1420012_at 1420886_a_at 1437223_s_at	1394	2.059	0.4578	Yes
46	YARS	1460638_at	1412	2.048	0.4641	Yes
47	ALDH4A1	1452375_at	1431	2.035	0.4703	Yes
48	IDH3B	1418885_a_at 1418886_s_at 1441271_at	1439	2.032	0.4770	Yes
49	FASN	1423828_at	1556	1.976	0.4785	Yes
50	UBE2M	1424345_s_at 1425858_at	1687	1.908	0.4791	Yes
51	MRPS12	1448799_s_at	1780	1.854	0.4813	Yes
52	EBP	1416667_at	1876	1.796	0.4831	Yes
53	PFKM	1416780_at	1906	1.779	0.4879	Yes
54	SRM	1421260_a_at	1985	1.736	0.4903	Yes
55	ACAT2	1435630_s_at	2025	1.709	0.4945	Yes
56	ASNS	1433966_x_at 1451095_at	2060	1.693	0.4987	Yes
57	PHB	1435144_at 1442233_at 1448563_at	2079	1.682	0.5037	Yes
58	NP	1416530_a_at	2106	1.668	0.5083	Yes
59	IDH3A	1422500_at 1422501_s_at 1432016_a_at 1447701_x_at	2224	1.610	0.5085	Yes
60	AK2	1448450_at 1448451_at	2254	1.592	0.5126	Yes
61	NARS	1428666_at 1452866_at	2382	1.532	0.5121	Yes
62	BCAP31	1451049_at 1456279_a_at	2509	1.470	0.5114	Yes
63	RPS26	1415876_a_at	2668	1.413	0.5090	Yes
64	WDR18	1433635_at 1443758_at 1454695_at 1460622_x_at	2799	1.372	0.5078	Yes
65	GLO1	1424108_at 1424109_a_at 1436070_at 1451240_a_at	2880	1.347	0.5087	Yes
66	NDUFS3	1423737_at	2935	1.330	0.5108	Yes
67	IDI1	1423804_a_at 1451122_at	2966	1.321	0.5140	Yes
68	WBSCR22	1423575_a_at	3024	1.304	0.5159	Yes
69	PPIF	1416940_at 1438955_x_at	3051	1.297	0.5192	Yes
70	PSMD14	1421751_a_at 1446521_at 1457765_at 1459734_at	3235	1.246	0.5151	No
71	DDX21	1448270_at 1448271_a_at	3502	1.187	0.5070	No
72	EIF4G1	1427036_a_at 1427037_at 1438686_at	3507	1.185	0.5109	No
73	TIMM17A	1426256_at	3657	1.154	0.5080	No
74	DHCR24	1418129_at 1451895_a_at	3685	1.149	0.5107	No
75	RAE1	1429528_at 1444256_at 1459822_at	3847	1.120	0.5072	No
76	PSMD8	1423296_at	3998	1.094	0.5041	No
77	COX11	1429188_at 1457846_at	4091	1.078	0.5036	No
78	DNAJA1	1416288_at 1437220_x_at 1445729_at 1459835_s_at 1460179_at	4203	1.061	0.5021	No
79	TARS	1460323_at	4437	1.027	0.4950	No
80	RNASEH1	1453833_a_at	4493	1.021	0.4960	No
81	GCDH	1448717_at	5107	0.951	0.4711	No
82	TFRC	1422966_a_at 1422967_a_at 1452661_at AFFX-TransRecMur/X57349_3_at AFFX-TransRecMur/X57349_5_at AFFX-TransRecMur/X57349_M_at	5551	0.889	0.4538	No
83	PSMD5	1423234_at	5594	0.883	0.4549	No
84	EIF2B2	1434538_x_at 1437428_x_at 1451136_a_at	5614	0.881	0.4571	No
85	P2RX5	1449433_at	5670	0.874	0.4576	No
86	SF3A3	1423811_at	5833	0.851	0.4531	No
87	ETF1	1420023_at 1420024_s_at 1424013_at 1440629_at 1451208_at	6458	0.773	0.4271	No
88	TIMM44	1417670_at 1439371_x_at 1448801_a_at	6523	0.765	0.4268	No
89	HYOU1	1423290_at 1423291_s_at 1451913_a_at	6691	0.745	0.4217	No
90	HSPA4	1416146_at 1416147_at 1440575_at	6994	0.711	0.4103	No
91	BMP1	1426238_at 1427457_a_at 1427458_at 1446007_at	7085	0.701	0.4085	No
92	CHERP	1431770_at 1436885_a_at 1451896_a_at	7222	0.685	0.4047	No
93	ACVRL1	1435825_at 1451604_a_at	7253	0.682	0.4056	No
94	PPIB	1437649_x_at 1450911_at	7507	0.650	0.3963	No
95	BTK	1422755_at	7610	0.640	0.3938	No
96	ATP5G3	1454661_at	7732	0.627	0.3904	No
97	PITPNB	1420307_a_at 1421013_at 1434257_s_at 1454892_at	7798	0.621	0.3895	No
98	KPNA3	1421828_at 1445527_at 1446538_at 1450385_at 1450386_at	7951	0.605	0.3846	No
99	UBE2L3	1417907_at 1417908_s_at 1448879_at 1448880_at	8198	0.580	0.3753	No
100	PTRF	1421431_at 1424130_a_at 1453891_at	8660	0.534	0.3560	No
101	CSE1L	1448809_at	8764	0.523	0.3531	No
102	PIP5K1A	1421833_at 1421834_at 1450389_s_at	8831	0.517	0.3518	No
103	NUP98	1434220_at 1439154_at 1446397_at 1446988_at	8982	0.502	0.3467	No
104	FKBP4	1416362_a_at 1416363_at 1458729_at 1459808_at	9388	0.463	0.3297	No
105	WNT10B	1426091_a_at	9638	0.436	0.3197	No
106	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	9676	0.432	0.3195	No
107	TOMM40	1426118_a_at 1459680_at	10194	0.383	0.2971	No
108	EIF2B4	1449940_a_at	10607	0.345	0.2793	No
109	S100A4	1424542_at	10838	0.322	0.2699	No
110	RTN4	1421116_a_at 1435284_at 1437224_at 1439650_at 1442760_x_at 1452649_at	10883	0.317	0.2690	No
111	POLR2F	1415754_at 1427402_at	11496	0.262	0.2417	No
112	GTF3C1	1434066_at 1438425_at 1456024_at 1459673_at	11695	0.240	0.2335	No
113	EEF1E1	1444757_at 1449044_at	11791	0.229	0.2299	No
114	ID2	1422537_a_at 1435176_a_at 1453596_at	12717	0.145	0.1879	No
115	MYCBP	1421165_at 1427938_at 1427939_s_at 1427940_s_at 1452608_at	13027	0.113	0.1741	No
116	RAB14	1415686_at 1419243_at 1419244_a_at 1419245_at 1419246_s_at 1439687_at 1441992_at	13597	0.049	0.1481	No
117	MMP15	1422597_at 1437462_x_at 1439734_at	13827	0.024	0.1377	No
118	CD47	1419554_at 1428187_at 1430997_at 1449507_a_at 1458634_at 1459908_at	13844	0.023	0.1370	No
119	SLC39A14	1425649_at 1427035_at 1438490_at 1457770_at	13856	0.022	0.1366	No
120	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	14044	0.002	0.1280	No
121	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14134	-0.009	0.1239	No
122	PTPN1	1417068_a_at 1438670_at	14354	-0.034	0.1140	No
123	CCT2	1416037_a_at 1433534_a_at 1433535_x_at	14742	-0.085	0.0965	No
124	PICALM	1441328_at 1443218_at 1446968_at 1451316_a_at 1455773_at	14923	-0.106	0.0886	No
125	ICT1	1444276_at 1460308_a_at	15182	-0.140	0.0772	No
126	CCNC	1417861_at 1428570_at 1454144_a_at 1454336_at	15397	-0.173	0.0680	No
127	SAFB	1432911_at 1454415_at 1454928_at 1454929_s_at	15750	-0.226	0.0526	No
128	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	15967	-0.268	0.0436	No
129	NMT1	1415683_at 1418082_at 1454941_at	16408	-0.350	0.0246	No
130	ARF1	1420920_a_at 1426390_a_at	16508	-0.371	0.0213	No
131	HSPA5	1416064_a_at 1427464_s_at 1447824_x_at	16518	-0.374	0.0222	No
132	GSPT1	1426736_at 1426737_at 1435000_at 1446550_at 1452168_x_at 1455173_at	16648	-0.405	0.0177	No
133	PTDSS1	1416372_at 1441866_s_at 1449739_at	16795	-0.442	0.0125	No
134	UCHL1	1448260_at	16954	-0.485	0.0069	No
135	CDC25A	1417131_at 1417132_at 1445995_at	17039	-0.504	0.0048	No
136	ADRM1	1419263_a_at 1438170_x_at	17133	-0.529	0.0023	No
137	LIMK2	1418581_a_at 1439896_at 1452060_a_at 1458628_at	17368	-0.599	-0.0063	No
138	ATP1B3	1423126_at	17395	-0.606	-0.0055	No
139	SSBP1	1427965_at 1430294_at 1444053_at 1452616_s_at 1452617_at	17462	-0.627	-0.0063	No
140	AHSA1	1424147_at 1444500_at	17565	-0.664	-0.0087	No
141	BYSL	1422767_at 1450742_at	17691	-0.698	-0.0120	No
142	CCT4	1415867_at 1415868_at 1430034_at 1433447_x_at 1438560_x_at 1442569_at 1456082_x_at 1456572_x_at	17767	-0.721	-0.0130	No
143	HADH2	1438391_x_at 1448286_at	17788	-0.730	-0.0114	No
144	SCD	1415964_at 1415965_at	17820	-0.743	-0.0103	No
145	CTSC	1416382_at 1437939_s_at 1446834_at	17887	-0.767	-0.0106	No
146	ATP6V0E	1416328_a_at	18013	-0.809	-0.0136	No
147	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	18045	-0.825	-0.0122	No
148	COPB2	1452102_at 1456175_a_at	18158	-0.866	-0.0143	No
149	XPO6	1422759_a_at 1440492_at 1443737_at	18360	-0.931	-0.0203	No
150	DAP3	1450848_at	18642	-1.022	-0.0297	No
151	JTB	1424283_at	18775	-1.069	-0.0321	No
152	CALU	1415870_at 1441477_at	18941	-1.138	-0.0358	No
153	POLR2B	1433552_a_at	18979	-1.164	-0.0334	No
154	EXTL3	1421339_at 1434703_at	19019	-1.177	-0.0312	No
155	SREBF1	1426690_a_at	19297	-1.318	-0.0393	No
156	MLF2	1423916_s_at	19520	-1.461	-0.0445	No
157	HCCS	1420889_at 1420890_at	19568	-1.484	-0.0415	No
158	NXF1	1416791_a_at	19699	-1.573	-0.0421	No
159	PSMC2	1426611_at 1435859_x_at 1443307_at	19805	-1.649	-0.0412	No
160	CAPZA2	1423057_at 1423058_at	19929	-1.749	-0.0408	No
161	AATF	1432394_a_at 1439676_at 1441722_at 1447459_at	19936	-1.753	-0.0350	No
162	GORASP2	1424710_a_at 1442825_at 1460460_a_at	19974	-1.784	-0.0306	No
163	ARMET	1428112_at 1459455_at	20058	-1.854	-0.0280	No
164	PTBP1	1424874_a_at 1450443_at 1458284_at	20212	-1.978	-0.0282	No
165	DDX3X	1416467_at 1423042_at 1423043_s_at	20266	-2.006	-0.0237	No
166	IFI30	1422476_at	20435	-2.137	-0.0240	No
167	CHUK	1417091_at 1428210_s_at 1451383_a_at	20599	-2.328	-0.0235	No
168	MAPKAPK3	1434815_a_at 1437494_at	20608	-2.335	-0.0158	No
169	EIF4G2	1415863_at 1452758_s_at	20796	-2.567	-0.0155	No
170	RABGGTB	1419553_a_at	20857	-2.668	-0.0091	No
171	ATP6V0C	1416392_a_at 1435732_x_at 1438925_x_at	21023	-2.950	-0.0065	No
172	PPP2R2A	1429715_at 1437730_at 1453260_a_at	21059	-3.027	0.0024	No
173	INPP5E	1423229_at 1423230_at	21546	-4.640	-0.0039	No
174	TCP1	1442317_at 1448122_at	21742	-6.319	0.0089	No