Details for gene set MOOTHA

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	MOOTHA_VOXPHOS
Enrichment Score (ES)	0.70690596
Normalized Enrichment Score (NES)	2.5837197
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COX5B	1416902_a_at 1435613_x_at 1436149_at 1448514_at 1454716_x_at 1456588_x_at	0	8.587	0.0614	Yes
2	NDUFS7	1424313_a_at 1451312_at	219	4.633	0.0845	Yes
3	ATP5G1	1416020_a_at 1444874_at	272	4.304	0.1129	Yes
4	NFKBIL2	1428661_at	297	4.136	0.1414	Yes
5	SDHD	1428235_at 1437489_x_at	324	3.973	0.1686	Yes
6	ATP5G2	1415980_at 1456128_at	325	3.967	0.1970	Yes
7	CYC1	1416604_at	392	3.742	0.2207	Yes
8	UQCR	1448292_at	428	3.627	0.2450	Yes
9	ATP5E	1416567_s_at	446	3.593	0.2699	Yes
10	SDHB	1418005_at	502	3.417	0.2918	Yes
11	ATP5L	1448203_at	527	3.356	0.3147	Yes
12	NDUFC1	1416285_at 1448284_a_at	583	3.216	0.3352	Yes
13	NDUFS6	1433603_at	630	3.116	0.3554	Yes
14	NDUFA9	1416663_at	683	2.972	0.3742	Yes
15	BCS1L	1451541_at	759	2.821	0.3910	Yes
16	MBD3	1417728_at	858	2.667	0.4056	Yes
17	NDUFA4	1424085_at	860	2.665	0.4246	Yes
18	COX7A1	1418709_at	983	2.472	0.4367	Yes
19	UQCRC1	1428782_a_at	988	2.464	0.4541	Yes
20	NDUFB6	1434056_a_at 1434057_at	1047	2.394	0.4686	Yes
21	COX7A2	1416970_a_at 1416971_at	1076	2.353	0.4841	Yes
22	COX5A	1415933_a_at 1439267_x_at 1448153_at	1094	2.324	0.4999	Yes
23	NDUFB5	1417102_a_at 1448589_at	1122	2.298	0.5151	Yes
24	NDUFA8	1423692_at	1182	2.225	0.5283	Yes
25	ATP5O	1416278_a_at	1186	2.221	0.5441	Yes
26	CYCS	1422484_at 1445484_at	1361	2.084	0.5510	Yes
27	NDUFS8	1423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at	1384	2.070	0.5648	Yes
28	ATP5J2	1416269_at 1435395_s_at	1432	2.035	0.5772	Yes
29	NDUFA5	1417285_a_at 1417286_at	1495	2.003	0.5887	Yes
30	ATP5F1	1426742_at 1433562_s_at	1524	1.992	0.6016	Yes
31	PET112L	1424282_at 1444502_at	1605	1.949	0.6119	Yes
32	COX6C	1415970_at 1434491_a_at	1682	1.911	0.6221	Yes
33	NDUFA6	1448427_at	1879	1.795	0.6260	Yes
34	ATP5J	1416143_at	2155	1.642	0.6251	Yes
35	SDHC	1435986_x_at 1448630_a_at	2168	1.636	0.6363	Yes
36	NDUFS2	1451096_at	2223	1.610	0.6453	Yes
37	NDUFA7	1422976_x_at 1428360_x_at 1436567_a_at 1450818_a_at 1455749_x_at	2304	1.565	0.6528	Yes
38	NDUFB2	1416834_x_at 1442658_at 1448483_a_at 1453806_at	2308	1.563	0.6639	Yes
39	ATP5B	1416829_at	2361	1.539	0.6725	Yes
40	CNOT7	1423641_s_at 1430519_a_at 1460665_a_at	2415	1.518	0.6809	Yes
41	ATP5I	1422525_at 1434053_x_at 1450640_x_at	2416	1.518	0.6918	Yes
42	NDUFA2	1417368_s_at	2704	1.402	0.6887	Yes
43	NDUFS3	1423737_at	2935	1.330	0.6877	Yes
44	SURF2	1433609_s_at 1453117_at	3010	1.309	0.6936	Yes
45	NDUFB7	1416417_a_at 1448331_at	3114	1.278	0.6981	Yes
46	NDUFA3	1428464_at 1430149_at 1452790_x_at	3175	1.261	0.7043	Yes
47	NDUFB3	1416547_at	3312	1.230	0.7069	Yes
48	COX11	1429188_at 1457846_at	4091	1.078	0.6790	No
49	ATP5D	1423716_s_at 1456580_s_at	4261	1.052	0.6788	No
50	UQCRFS1	1450968_at	4401	1.032	0.6798	No
51	COX4I1	1448322_a_at	4539	1.017	0.6808	No
52	NDUFA10	1418068_at 1448934_at	4668	1.003	0.6822	No
53	ATP5C1	1416058_s_at 1438809_at	4775	0.992	0.6844	No
54	NDUFS1	1425143_a_at 1453354_at	5524	0.892	0.6566	No
55	NDUFS4	1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at	5725	0.865	0.6536	No
56	COX6A2	1417607_at 1457633_x_at	5761	0.860	0.6581	No
57	COX6A1	1417417_a_at	7363	0.667	0.5897	No
58	ATP5G3	1454661_at	7732	0.627	0.5773	No
59	COX10	1429329_at 1446223_at 1459977_x_at	9742	0.426	0.4885	No
60	SURF1	1450561_a_at	9843	0.417	0.4869	No
61	UQCRC2	1428631_a_at 1435757_a_at	10395	0.366	0.4643	No
62	NDUFC2	1431670_at	11039	0.305	0.4370	No
63	NDUFB4	1428075_at 1428076_s_at 1432427_at	12174	0.194	0.3866	No
64	UQCRH	1452133_at 1453229_s_at	12385	0.175	0.3782	No
65	SDHA	1426688_at 1426689_s_at 1445317_at	12709	0.145	0.3645	No
66	ATP5H	1423676_at 1435112_a_at	13568	0.052	0.3256	No
67	CKAP1	1448533_at	14668	-0.074	0.2758	No
68	BCL2L1	1420887_a_at 1420888_at 1426050_at 1426191_a_at	15347	-0.166	0.2460	No
69	NDUFS5	1416494_at 1416495_s_at	16403	-0.349	0.2003	No
70	COX7C	1448112_at 1459884_at 1459885_s_at	17030	-0.501	0.1752	No
71	COX15	1426693_x_at 1437982_x_at 1452146_a_at 1460376_a_at	17448	-0.622	0.1606	No
72	NDUFB8	1448198_a_at 1458404_at	17522	-0.652	0.1619	No
73	COX7A2L	1421772_a_at 1432263_a_at 1432264_x_at	17935	-0.783	0.1486	No
74	UQCRB	1416337_at 1455997_a_at	18297	-0.912	0.1387	No
75	NDUFAB1	1428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at	19271	-1.302	0.1034	No
76	NGFRAP1	1428842_a_at	20799	-2.576	0.0520	No