Details for gene set MANALO_HYPOXIA

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	MANALO_HYPOXIA_DN
Enrichment Score (ES)	0.589679
Normalized Enrichment Score (NES)	2.1344225
Nominal p-value	0.0
FDR q-value	1.366486E-4
FWER p-Value	0.0030

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ZWINT	1423724_at 1427539_a_at 1427540_at 1429786_a_at 1429787_x_at 1444717_at 1455382_at	59	7.383	0.0486	Yes
2	TRIP13	1429294_at 1429295_s_at 1446760_at	118	5.762	0.0861	Yes
3	CCNF	1422513_at 1443807_x_at	122	5.698	0.1256	Yes
4	NOLC1	1428869_at 1428870_at 1450087_a_at	157	5.258	0.1606	Yes
5	CDC6	1417019_a_at	179	5.023	0.1945	Yes
6	MCM6	1416251_at 1438852_x_at 1447756_x_at	182	5.000	0.2292	Yes
7	MCM5	1415945_at 1436808_x_at	216	4.655	0.2601	Yes
8	SNRPD1	1416336_s_at	243	4.511	0.2903	Yes
9	RFC5	1452917_at	310	4.071	0.3156	Yes
10	RFC3	1423700_at 1432538_a_at	381	3.777	0.3386	Yes
11	DHFR	1419172_at 1430750_at	556	3.278	0.3535	Yes
12	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	652	3.050	0.3703	Yes
13	MCM2	1434079_s_at 1448777_at	864	2.652	0.3791	Yes
14	MRPL46	1449004_at	947	2.516	0.3929	Yes
15	MAD2L1	1422460_at	959	2.501	0.4097	Yes
16	CTPS	1416563_at	1042	2.398	0.4227	Yes
17	TSFM	1432170_at 1452698_at	1059	2.376	0.4385	Yes
18	NOL5A	1426533_at 1455035_s_at	1067	2.361	0.4546	Yes
19	UBE2S	1416726_s_at 1430962_at	1103	2.316	0.4691	Yes
20	RRS1	1416998_at 1456865_x_at	1136	2.279	0.4835	Yes
21	POLD2	1448277_at	1137	2.275	0.4993	Yes
22	DNA2L	1438817_at 1452210_at 1457909_at	1179	2.227	0.5129	Yes
23	RNU3IP2	1451293_at	1190	2.217	0.5279	Yes
24	ORC6L	1417037_at	1224	2.192	0.5416	Yes
25	UMPS	1431652_at 1434859_at 1451445_at 1455832_a_at	1299	2.131	0.5530	Yes
26	MRPL40	1448849_at	1386	2.068	0.5635	Yes
27	MCM10	1433407_at 1433408_a_at 1454244_at	1430	2.036	0.5757	Yes
28	RPP30	1423373_at	1460	2.018	0.5884	Yes
29	MRPS12	1448799_s_at	1780	1.854	0.5867	Yes
30	PRPS1	1416052_at	2163	1.639	0.5806	Yes
31	CCNE1	1416492_at 1441910_x_at	2295	1.570	0.5855	Yes
32	RRM2	1416120_at 1434437_x_at 1448226_at	2434	1.506	0.5897	Yes
33	BRCA1	1424629_at 1424630_a_at 1427698_at 1443763_at 1451417_at	2922	1.334	0.5767	No
34	DDX21	1448270_at 1448271_a_at	3502	1.187	0.5584	No
35	ID1	1425895_a_at	3846	1.120	0.5505	No
36	SKP2	1418969_at 1425072_at 1436000_a_at 1437033_a_at 1449293_a_at 1460247_a_at	4108	1.076	0.5461	No
37	SNRPD3	1422884_at 1422885_at 1449629_s_at	4294	1.046	0.5449	No
38	POLE2	1427094_at 1431440_at	4567	1.013	0.5395	No
39	HNRPD	1425142_a_at 1446083_at	4634	1.006	0.5435	No
40	BARD1	1420594_at	4697	1.001	0.5476	No
41	USP39	1437007_x_at 1460209_at	5228	0.933	0.5298	No
42	DHX35	1452693_at	5508	0.894	0.5233	No
43	MCM4	1416214_at 1436708_x_at	5554	0.888	0.5274	No
44	MFN2	1441424_at 1448131_at 1451900_at	5608	0.882	0.5311	No
45	DDX23	1430050_at	6080	0.822	0.5153	No
46	HNRPDL	1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at	6283	0.795	0.5116	No
47	USP1	1423674_at 1423675_at 1451080_at	7310	0.674	0.4693	No
48	PPARD	1425703_at 1439797_at	7462	0.655	0.4670	No
49	ELK1	1421896_at 1421897_at 1446390_at	7879	0.612	0.4522	No
50	ILF3	1422546_at 1436802_at 1460669_at	8047	0.595	0.4487	No
51	TFAM	1448224_at 1456215_at	8327	0.567	0.4399	No
52	DDX11	1438447_at 1441062_at	8464	0.554	0.4375	No
53	CDC7	1426002_a_at 1426021_a_at	8493	0.550	0.4401	No
54	NEK4	1427639_a_at 1449861_at	8921	0.509	0.4241	No
55	RPL39	1423032_at 1450840_a_at	9429	0.458	0.4041	No
56	PA2G4	1420142_s_at 1423060_at 1435372_a_at 1450854_at 1460265_at	9676	0.432	0.3958	No
57	PSME3	1418078_at 1418079_at 1438509_at	9775	0.424	0.3943	No
58	PRC1	1423774_a_at 1423775_s_at	10315	0.373	0.3722	No
59	RRM1	1415878_at 1440073_at 1448127_at	11318	0.279	0.3283	No
60	MAZ	1427099_at	11722	0.237	0.3115	No
61	DDX18	1416070_a_at 1416071_at 1456000_at	12039	0.205	0.2985	No
62	GTPBP4	1423142_a_at 1423143_at 1450873_at	13313	0.080	0.2408	No
63	POLG	1423272_at 1423273_at 1437564_at	14658	-0.073	0.1798	No
64	BOP1	1423264_at 1430491_at	15352	-0.167	0.1493	No
65	PSMD11	1429370_a_at 1432726_at 1456059_at 1456104_at	15967	-0.268	0.1231	No
66	MLLT10	1419772_at 1420869_at 1420870_at 1438525_at 1442070_at 1443500_at	16428	-0.354	0.1045	No
67	HNRPU	1423050_s_at 1423051_at 1434390_at 1434391_at 1450849_at	16786	-0.441	0.0912	No
68	CCNE2	1422535_at	17102	-0.522	0.0804	No
69	UCHL5	1419452_at 1419453_at 1455086_at 1459011_at	17187	-0.544	0.0804	No
70	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	17738	-0.710	0.0602	No
71	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	17852	-0.755	0.0602	No
72	POLR3K	1422752_at 1422753_a_at 1439266_a_at 1440735_at 1450737_at 1456731_x_at	18593	-1.003	0.0334	No
73	MPHOSPH9	1419909_at 1419910_at 1431053_at 1438063_at 1440915_at 1449659_s_at	18706	-1.040	0.0355	No
74	RFC2	1417503_at 1457638_x_at 1457669_x_at	18857	-1.102	0.0363	No
75	SNAPC5	1427999_at	20691	-2.435	-0.0307	No
76	ATIC	1428506_at 1452811_at	21098	-3.121	-0.0275	No
77	PSME4	1426823_s_at 1426824_at 1440511_at 1445147_at 1446464_at 1452211_at	21133	-3.185	-0.0069	No
78	MCM3	1420029_at 1426653_at	21738	-6.271	0.0091	No