Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos |
| Phenotype | phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | LEE_TCELLS4_UP |
| Enrichment Score (ES) | -0.64696515 |
| Normalized Enrichment Score (NES) | -2.0346527 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.005708795 |
| FWER p-Value | 0.034 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | EMP3 | 1417104_at | 391 | 3.744 | 0.0258 | No | ||
| 2 | ATM | 1421205_at 1428830_at | 1733 | 1.883 | -0.0135 | No | ||
| 3 | NELL2 | 1423560_at 1423561_at | 1955 | 1.755 | -0.0031 | No | ||
| 4 | SEMA4C | 1433920_at | 2594 | 1.439 | -0.0154 | No | ||
| 5 | LDLRAP1 | 1424378_at 1457162_at | 2991 | 1.315 | -0.0182 | No | ||
| 6 | RNASET2 | 1431785_at 1452734_at 1456012_x_at | 3525 | 1.182 | -0.0287 | No | ||
| 7 | CD44 | 1423760_at 1434376_at 1443265_at 1452483_a_at | 3784 | 1.134 | -0.0273 | No | ||
| 8 | MAN1C1 | 1436193_at | 4041 | 1.088 | -0.0263 | No | ||
| 9 | DENND2D | 1438712_at 1451363_a_at | 4764 | 0.994 | -0.0477 | No | ||
| 10 | EBI2 | 1437356_at 1457691_at | 7760 | 0.624 | -0.1772 | No | ||
| 11 | TBC1D4 | 1435292_at 1455903_at | 7929 | 0.607 | -0.1777 | No | ||
| 12 | LRRN3 | 1434539_at | 11114 | 0.299 | -0.3197 | No | ||
| 13 | ANK3 | 1425202_a_at 1439220_at 1447259_at 1451628_a_at 1457288_at | 11235 | 0.288 | -0.3218 | No | ||
| 14 | ABP1 | 1420709_s_at 1424600_at | 12884 | 0.128 | -0.3955 | No | ||
| 15 | COTL1 | 1416001_a_at 1416002_x_at 1425801_x_at 1436236_x_at 1436838_x_at 1437811_x_at | 14331 | -0.031 | -0.4612 | No | ||
| 16 | AMIGO2 | 1434601_at 1447769_x_at | 14507 | -0.055 | -0.4686 | No | ||
| 17 | TNFSF10 | 1420412_at 1439680_at 1459913_at | 14624 | -0.069 | -0.4731 | No | ||
| 18 | GPR171 | 1438439_at | 15225 | -0.147 | -0.4988 | No | ||
| 19 | CYLD | 1429617_at 1429618_at 1445213_at | 16421 | -0.352 | -0.5492 | No | ||
| 20 | IFITM1 | 1424254_at | 17040 | -0.504 | -0.5716 | No | ||
| 21 | FOXO1A | 1416981_at 1416982_at 1416983_s_at 1459170_at | 17552 | -0.660 | -0.5872 | No | ||
| 22 | SLC2A3 | 1421924_at 1427770_a_at 1437052_s_at 1455898_x_at | 18009 | -0.809 | -0.5986 | No | ||
| 23 | IL27RA | 1449508_at | 18313 | -0.917 | -0.6017 | No | ||
| 24 | TNFRSF25 | 1422231_a_at | 19062 | -1.195 | -0.6219 | No | ||
| 25 | TNFRSF7 | 1452389_at | 19611 | -1.506 | -0.6294 | Yes | ||
| 26 | GIMAP7 | 1425084_at 1444283_at | 19737 | -1.599 | -0.6164 | Yes | ||
| 27 | PDE4DIP | 1417626_at 1433761_at 1456413_at 1460426_at | 20042 | -1.843 | -0.6088 | Yes | ||
| 28 | BTLA | 1455656_at | 20143 | -1.926 | -0.5909 | Yes | ||
| 29 | PRMT2 | 1416844_at 1437234_x_at | 20357 | -2.062 | -0.5766 | Yes | ||
| 30 | IL4R | 1421034_a_at 1423996_a_at 1447858_x_at | 20417 | -2.115 | -0.5546 | Yes | ||
| 31 | ACTN1 | 1427385_s_at 1428585_at 1452415_at | 20628 | -2.369 | -0.5366 | Yes | ||
| 32 | GBP2 | 1418240_at 1435906_x_at | 21241 | -3.475 | -0.5240 | Yes | ||
| 33 | EDG1 | 1423571_at | 21463 | -4.214 | -0.4849 | Yes | ||
| 34 | IFITM2 | 1417460_at | 21522 | -4.488 | -0.4352 | Yes | ||
| 35 | MAP3K1 | 1424850_at | 21547 | -4.641 | -0.3822 | Yes | ||
| 36 | TUBA1 | 1418884_x_at | 21593 | -5.061 | -0.3252 | Yes | ||
| 37 | GIMAP4 | 1424374_at 1424375_s_at | 21695 | -5.810 | -0.2620 | Yes | ||
| 38 | PSCDBP | 1435697_a_at 1451206_s_at | 21842 | -7.505 | -0.1811 | Yes | ||
| 39 | KLF2 | 1448890_at | 21868 | -7.734 | -0.0920 | Yes | ||
| 40 | CCR7 | 1423466_at | 21917 | -8.151 | 0.0009 | Yes |
