Details for gene set HSA00190_OXIDATIVE

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	SCID
GeneSet	HSA00190_OXIDATIVE_PHOSPHORYLATION
Enrichment Score (ES)	0.6036204
Normalized Enrichment Score (NES)	2.3055205
Nominal p-value	0.0
FDR q-value	0.0
FWER p-Value	0.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COX5B	1416902_a_at 1435613_x_at 1436149_at 1448514_at 1454716_x_at 1456588_x_at	0	8.587	0.0488	Yes
2	PPA1	1416939_at	165	5.127	0.0704	Yes
3	NDUFS7	1424313_a_at 1451312_at	219	4.633	0.0943	Yes
4	ATP5G1	1416020_a_at 1444874_at	272	4.304	0.1163	Yes
5	SDHD	1428235_at 1437489_x_at	324	3.973	0.1366	Yes
6	ATP5G2	1415980_at 1456128_at	325	3.967	0.1591	Yes
7	CYC1	1416604_at	392	3.742	0.1773	Yes
8	UQCR	1448292_at	428	3.627	0.1963	Yes
9	ATP5E	1416567_s_at	446	3.593	0.2159	Yes
10	SDHB	1418005_at	502	3.417	0.2328	Yes
11	ATP5L	1448203_at	527	3.356	0.2508	Yes
12	NDUFC1	1416285_at 1448284_a_at	583	3.216	0.2665	Yes
13	NDUFS6	1433603_at	630	3.116	0.2821	Yes
14	NDUFA12	1418814_s_at 1433513_x_at	635	3.102	0.2996	Yes
15	NDUFA9	1416663_at	683	2.972	0.3143	Yes
16	NDUFV1	1415966_a_at 1415967_at 1456015_x_at	723	2.891	0.3289	Yes
17	NDUFA4	1424085_at	860	2.665	0.3378	Yes
18	NDUFB10	1428322_a_at	923	2.549	0.3495	Yes
19	NDUFV2	1428179_at 1438159_x_at 1452692_a_at	981	2.472	0.3609	Yes
20	COX7A1	1418709_at	983	2.472	0.3749	Yes
21	UQCRC1	1428782_a_at	988	2.464	0.3887	Yes
22	NDUFB6	1434056_a_at 1434057_at	1047	2.394	0.3996	Yes
23	COX7A2	1416970_a_at 1416971_at	1076	2.353	0.4117	Yes
24	COX5A	1415933_a_at 1439267_x_at 1448153_at	1094	2.324	0.4241	Yes
25	NDUFB5	1417102_a_at 1448589_at	1122	2.298	0.4359	Yes
26	NDUFA8	1423692_at	1182	2.225	0.4459	Yes
27	ATP5O	1416278_a_at	1186	2.221	0.4584	Yes
28	NDUFS8	1423907_a_at 1423908_at 1434212_at 1434213_x_at 1434579_x_at 1455283_x_at	1384	2.070	0.4611	Yes
29	ATP5J2	1416269_at 1435395_s_at	1432	2.035	0.4705	Yes
30	PPA2	1424488_a_at	1446	2.028	0.4814	Yes
31	COX8A	1416112_at 1436409_at 1448222_x_at	1486	2.006	0.4910	Yes
32	NDUFA5	1417285_a_at 1417286_at	1495	2.003	0.5020	Yes
33	ATP5F1	1426742_at 1433562_s_at	1524	1.992	0.5120	Yes
34	COX6C	1415970_at 1434491_a_at	1682	1.911	0.5157	Yes
35	COX6B2	1435275_at	1740	1.878	0.5238	Yes
36	NDUFA6	1448427_at	1879	1.795	0.5276	Yes
37	TCIRG1	1420635_a_at	1929	1.769	0.5354	Yes
38	COX4I2	1421373_at	2130	1.654	0.5357	Yes
39	ATP5J	1416143_at	2155	1.642	0.5439	Yes
40	SDHC	1435986_x_at 1448630_a_at	2168	1.636	0.5526	Yes
41	NDUFS2	1451096_at	2223	1.610	0.5593	Yes
42	NDUFA7	1422976_x_at 1428360_x_at 1436567_a_at 1450818_a_at 1455749_x_at	2304	1.565	0.5645	Yes
43	NDUFB2	1416834_x_at 1442658_at 1448483_a_at 1453806_at	2308	1.563	0.5733	Yes
44	ATP5B	1416829_at	2361	1.539	0.5796	Yes
45	ATP5I	1422525_at 1434053_x_at 1450640_x_at	2416	1.518	0.5858	Yes
46	NDUFA2	1417368_s_at	2704	1.402	0.5806	Yes
47	ATP5A1	1420037_at 1423111_at 1449710_s_at	2886	1.346	0.5800	Yes
48	NDUFS3	1423737_at	2935	1.330	0.5853	Yes
49	NDUFA1	1422241_a_at	2955	1.324	0.5920	Yes
50	NDUFB7	1416417_a_at 1448331_at	3114	1.278	0.5920	Yes
51	NDUFA3	1428464_at 1430149_at 1452790_x_at	3175	1.261	0.5964	Yes
52	NDUFB3	1416547_at	3312	1.230	0.5972	Yes
53	UQCRQ	1427880_at 1430326_s_at 1437134_at 1452613_at	3324	1.228	0.6036	Yes
54	ATP6V0B	1416769_s_at 1425448_x_at 1437013_x_at	3611	1.163	0.5971	No
55	ATP5D	1423716_s_at 1456580_s_at	4261	1.052	0.5734	No
56	ATP6V1G2	1417799_at	4394	1.033	0.5732	No
57	UQCRFS1	1450968_at	4401	1.032	0.5788	No
58	COX4I1	1448322_a_at	4539	1.017	0.5783	No
59	NDUFA10	1418068_at 1448934_at	4668	1.003	0.5781	No
60	NDUFB9	1436803_a_at 1452184_at 1455934_at	4690	1.001	0.5828	No
61	COX17	1434435_s_at 1434871_at	4722	0.999	0.5871	No
62	ATP5C1	1416058_s_at 1438809_at	4775	0.992	0.5903	No
63	ATP6V1H	1415826_at 1447659_x_at 1457639_at	4785	0.991	0.5956	No
64	ATP4A	1421286_a_at	4790	0.990	0.6010	No
65	COX6B1	1416565_at 1436757_a_at	4879	0.980	0.6025	No
66	NDUFS1	1425143_a_at 1453354_at	5524	0.892	0.5781	No
67	NDUFS4	1418117_at 1438166_x_at 1444464_at 1448959_at 1459760_at	5725	0.865	0.5739	No
68	COX6A2	1417607_at 1457633_x_at	5761	0.860	0.5771	No
69	ATP4B	1448911_at	6125	0.814	0.5651	No
70	ATP6V0A4	1422030_at 1443732_at	7036	0.706	0.5275	No
71	ATP6V0D1	1415671_at 1442216_at	7254	0.682	0.5214	No
72	COX6A1	1417417_a_at	7363	0.667	0.5202	No
73	COX8C	1443789_x_at 1455167_at	7689	0.631	0.5089	No
74	ATP5G3	1454661_at	7732	0.627	0.5106	No
75	ATP6V1F	1423993_at	8054	0.594	0.4992	No
76	ATP6V1C2	1430306_a_at	8316	0.568	0.4905	No
77	NDUFA11	1429708_at 1444154_at	8374	0.563	0.4911	No
78	NDUFA13	1430713_s_at	9007	0.499	0.4650	No
79	COX10	1429329_at 1446223_at 1459977_x_at	9742	0.426	0.4338	No
80	ATP6V1E2	1450552_at	10024	0.399	0.4232	No
81	UQCRC2	1428631_a_at 1435757_a_at	10395	0.366	0.4083	No
82	NDUFC2	1431670_at	11039	0.305	0.3806	No
83	NDUFB11	1416056_a_at 1416057_at 1455911_x_at	11662	0.243	0.3535	No
84	ATP6V0D2	1434798_at 1444176_at	11684	0.240	0.3539	No
85	ATP12A	1449475_at	12112	0.199	0.3354	No
86	NDUFB4	1428075_at 1428076_s_at 1432427_at	12174	0.194	0.3337	No
87	UQCRH	1452133_at 1453229_s_at	12385	0.175	0.3251	No
88	SDHA	1426688_at 1426689_s_at 1445317_at	12709	0.145	0.3111	No
89	ATP6V0A1	1417632_at 1425227_a_at 1459924_at 1460650_at	13081	0.107	0.2948	No
90	ATP5H	1423676_at 1435112_a_at	13568	0.052	0.2728	No
91	ATP6V1B1	1419373_at	14787	-0.090	0.2175	No
92	ATP6V1B2	1415814_at 1419883_s_at 1446465_at 1449649_at	15272	-0.155	0.1962	No
93	NDUFS5	1416494_at 1416495_s_at	16403	-0.349	0.1464	No
94	COX7C	1448112_at 1459884_at 1459885_s_at	17030	-0.501	0.1206	No
95	COX15	1426693_x_at 1437982_x_at 1452146_a_at 1460376_a_at	17448	-0.622	0.1050	No
96	NDUFB8	1448198_a_at 1458404_at	17522	-0.652	0.1054	No
97	ATP6V0A2	1424513_at 1434791_at 1449870_a_at	17688	-0.697	0.1018	No
98	ATP6V1E1	1420038_at 1449711_at 1449712_s_at 1457049_at	18200	-0.882	0.0834	No
99	UQCRB	1416337_at 1455997_a_at	18297	-0.912	0.0842	No
100	ATP6AP1	1449622_s_at	18932	-1.133	0.0616	No
101	NDUFAB1	1428159_s_at 1428160_at 1435934_at 1447919_x_at 1453565_at 1458678_at	19271	-1.302	0.0535	No
102	ATP6V1A	1422508_at 1445916_at 1450634_at	19541	-1.473	0.0495	No
103	ATP6V1C1	1419544_at 1419545_a_at 1419546_at	19672	-1.555	0.0524	No
104	ATP6V1G1	1423255_at	20079	-1.867	0.0444	No
105	ATP6V0C	1416392_a_at 1435732_x_at 1438925_x_at	21023	-2.950	0.0180	No
106	ATP6V1D	1416951_a_at 1416952_at 1438993_a_at	21457	-4.191	0.0219	No