Details for gene set CHEN_HOXA5_TARGETS

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	CHEN_HOXA5_TARGETS_UP
Enrichment Score (ES)	-0.5332992
Normalized Enrichment Score (NES)	-2.0548372
Nominal p-value	0.0
FDR q-value	0.005695373
FWER p-Value	0.019

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ARIH1	1427188_at 1427189_at 1436498_at 1441022_at 1459397_at 1460090_at	111	5.952	0.0164	No
2	CEBPB	1418901_at 1427844_a_at	270	4.311	0.0248	No
3	CEBPG	1425261_at 1425262_at 1451639_at	326	3.958	0.0366	No
4	FEM1C	1428890_at 1438075_at	379	3.792	0.0479	No
5	CTH	1426243_at	737	2.869	0.0419	No
6	CASP3	1426165_a_at 1430192_at 1449839_at	1020	2.418	0.0377	No
7	NFIL3	1418932_at	1100	2.318	0.0425	No
8	TAF2	1434238_at 1457351_at	1289	2.137	0.0416	No
9	FOXO3A	1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at	1781	1.854	0.0257	No
10	SCG5	1423150_at 1446755_at	1800	1.846	0.0316	No
11	ASNS	1433966_x_at 1451095_at	2060	1.693	0.0258	No
12	CHAC1	1451382_at	2083	1.680	0.0309	No
13	CREB5	1440089_at 1442576_at 1457222_at	3136	1.272	-0.0128	No
14	DLX2	1448877_at	3302	1.232	-0.0159	No
15	CARF	1425313_at	3363	1.219	-0.0143	No
16	DMTF1	1422636_at 1440349_at 1456697_x_at	3465	1.195	-0.0146	No
17	PRKRIP1	1417425_at 1442084_at 1442598_at	3540	1.178	-0.0137	No
18	CARS	1427330_at 1452394_at	3875	1.116	-0.0250	No
19	HLX1	1418939_at	3949	1.106	-0.0244	No
20	TRPC1	1421095_a_at 1421096_at	4066	1.084	-0.0258	No
21	DSCR1	1416600_a_at 1416601_a_at	4246	1.054	-0.0302	No
22	KLF6	1418280_at 1427742_a_at 1433508_at 1447448_s_at 1459718_x_at	4474	1.023	-0.0369	No
23	ZNF35	1460252_s_at	4623	1.008	-0.0401	No
24	SUV420H1	1434999_at 1442764_at 1451817_at 1455171_at	4673	1.002	-0.0387	No
25	PELI1	1417371_at 1417372_a_at 1431060_at 1431061_s_at 1444017_at 1459272_at	4798	0.989	-0.0408	No
26	SNX16	1424276_at 1438803_s_at 1456041_at	4807	0.989	-0.0376	No
27	ATF3	1449363_at	5230	0.933	-0.0536	No
28	RYBP	1421111_at	5493	0.896	-0.0624	No
29	SNAI2	1418673_at 1447643_x_at	5774	0.858	-0.0721	No
30	TNFRSF10B	1421296_at 1422344_s_at	5956	0.837	-0.0774	No
31	SCYL3	1428918_at 1446655_at 1452960_at	5994	0.832	-0.0761	No
32	TBK1	1422469_at 1445571_at 1460315_s_at	6133	0.814	-0.0795	No
33	ZCCHC10	1418820_s_at	6182	0.807	-0.0788	No
34	DAAM1	1431035_at 1455244_at 1458662_at	6541	0.763	-0.0925	No
35	TSC22D1	1425742_a_at 1433899_x_at 1447360_at 1454758_a_at 1454971_x_at 1456132_x_at	6583	0.758	-0.0916	No
36	INTS6	1423274_at 1423275_at 1436089_at 1443128_at	6773	0.737	-0.0976	No
37	TNFAIP3	1433699_at 1450829_at	6966	0.715	-0.1039	No
38	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	6975	0.714	-0.1016	No
39	RBM15	1434514_at	7057	0.704	-0.1028	No
40	WAC	1437426_at 1439249_at 1444241_at 1451494_at 1451495_at 1457559_at 1458471_at	7106	0.698	-0.1025	No
41	AGTPBP1	1429933_at 1432385_a_at	7107	0.698	-0.1000	No
42	SFPQ	1423795_at 1423796_at 1436898_at 1438458_a_at 1438459_x_at 1439058_at	7505	0.651	-0.1158	No
43	PCTK2	1435143_at 1446130_at 1446272_at	7943	0.606	-0.1337	No
44	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	8245	0.575	-0.1455	No
45	CHD9	1435688_at 1441339_at 1457672_at 1458078_at 1459450_at	8427	0.557	-0.1518	No
46	TPTE	1427690_a_at	8460	0.554	-0.1512	No
47	KIF18A	1424107_at 1457895_at	8642	0.536	-0.1576	No
48	GAD1	1416561_at 1416562_at	8871	0.514	-0.1662	No
49	RIPK2	1421236_at 1450173_at	9165	0.482	-0.1779	No
50	FNBP4	1423191_at 1438700_at	9734	0.427	-0.2025	No
51	IFRD1	1416067_at 1442014_at	9831	0.419	-0.2054	No
52	SOX30	1440509_at	10330	0.371	-0.2269	No
53	RIC8B	1435096_at 1439724_at	10930	0.313	-0.2533	No
54	TMEFF1	1426649_at 1441890_x_at	11436	0.267	-0.2755	No
55	NEK1	1434267_at 1438592_at 1453612_at 1458211_at	11441	0.266	-0.2747	No
56	STC2	1419503_at 1445186_at 1449484_at	12191	0.192	-0.3084	No
57	CENPC1	1420441_at	12217	0.190	-0.3089	No
58	PTN	1416211_a_at 1443173_at 1443809_at 1448254_at	12279	0.184	-0.3110	No
59	F3	1417408_at	12679	0.148	-0.3288	No
60	PTPN2	1417140_a_at 1425197_at 1425198_at 1438562_a_at	12765	0.141	-0.3322	No
61	TANK	1421640_a_at 1441513_at 1459668_at	12812	0.137	-0.3338	No
62	NUPL1	1424389_at 1424390_at 1429878_a_at	12827	0.135	-0.3340	No
63	BDKRB1	1450586_at	12852	0.131	-0.3346	No
64	PPP1R12A	1429487_at 1437734_at 1437735_at 1444762_at 1444834_at 1453163_at	13320	0.079	-0.3558	No
65	FOSB	1422134_at	13344	0.077	-0.3566	No
66	SEC31A	1453014_a_at	13353	0.076	-0.3567	No
67	FOSL2	1422931_at	13450	0.065	-0.3608	No
68	DUSP8	1418714_at	13773	0.031	-0.3755	No
69	NSUN6	1427491_at 1432012_a_at	13953	0.012	-0.3837	No
70	RBM39	1420982_at 1426671_a_at 1438397_a_at 1438398_at 1438420_at 1439316_at 1456386_at	14087	-0.002	-0.3898	No
71	ZZZ3	1434332_at 1438487_s_at 1441748_at	14101	-0.004	-0.3904	No
72	PSPC1	1423192_at 1423193_at 1444748_at 1444957_at 1457723_at	14217	-0.017	-0.3956	No
73	JUN	1417409_at 1448694_at	14535	-0.057	-0.4100	No
74	PRPF38B	1428674_at 1452869_at 1455016_at 1456506_at	14570	-0.061	-0.4113	No
75	CEP76	1437209_at 1437254_at	15316	-0.161	-0.4449	No
76	KLF5	1430255_at 1451021_a_at 1451739_at	15413	-0.177	-0.4487	No
77	ARID4B	1431024_a_at 1431031_at 1435768_at 1446317_at 1451847_s_at 1460384_a_at	15444	-0.182	-0.4494	No
78	HRH1	1419210_at 1438494_at	15548	-0.196	-0.4534	No
79	GADD45B	1420197_at 1449773_s_at 1450971_at	15729	-0.221	-0.4609	No
80	LIF	1421206_at 1421207_at 1450160_at	15881	-0.249	-0.4670	No
81	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	15921	-0.257	-0.4678	No
82	RLF	1427171_at 1439555_at 1440020_at 1446057_at 1447164_at	16268	-0.323	-0.4825	No
83	SNX5	1417646_a_at 1417647_at 1417648_s_at 1437074_at 1448791_at	16312	-0.331	-0.4833	No
84	EIF5	1415723_at 1433631_at 1454663_at 1454664_a_at 1456256_at	16415	-0.351	-0.4867	No
85	SDCCAG1	1425697_at 1429327_at 1429446_at 1435020_at	16661	-0.409	-0.4965	No
86	SPATA5L1	1455863_at	16683	-0.415	-0.4960	No
87	NOC3L	1426286_at	16832	-0.451	-0.5011	No
88	CNOT4	1420999_at 1421000_at 1436645_a_at 1437586_at 1443169_at 1450083_at 1459449_at	16878	-0.465	-0.5015	No
89	TAF1A	1419702_at	16885	-0.466	-0.5001	No
90	TBX3	1437479_x_at 1439567_at 1444594_at 1445757_at 1448029_at	16977	-0.491	-0.5025	No
91	JOSD3	1430147_a_at 1430271_x_at 1436558_at 1442289_at 1452635_x_at 1452987_at 1457292_at	17246	-0.564	-0.5128	No
92	TSC22D2	1430535_at 1453012_at	17459	-0.625	-0.5202	No
93	GEM	1426063_a_at	17669	-0.693	-0.5273	No
94	GPATC2	1420528_at 1440329_s_at 1445189_at 1452498_at 1458566_at	17770	-0.721	-0.5293	No
95	CCNL1	1423622_a_at 1437383_at	17814	-0.741	-0.5286	No
96	BCL10	1418970_a_at 1418971_x_at 1418972_at 1443524_x_at	17917	-0.775	-0.5305	Yes
97	WDR67	1434241_at 1442286_at 1444689_at 1458158_at	17943	-0.785	-0.5288	Yes
98	ZCCHC6	1433910_at 1441986_at 1448037_at	17990	-0.801	-0.5280	Yes
99	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	17999	-0.805	-0.5255	Yes
100	RBBP6	1425114_at 1425115_at 1425421_at 1426487_a_at 1453611_at	18045	-0.825	-0.5245	Yes
101	PMAIP1	1418203_at	18072	-0.835	-0.5227	Yes
102	JMJD1C	1426900_at 1439998_at 1441592_at 1448049_at 1458521_at	18083	-0.838	-0.5201	Yes
103	PTGS2	1417262_at 1417263_at	18090	-0.840	-0.5174	Yes
104	AKAP10	1421121_at 1428482_at 1441829_s_at 1447570_s_at	18095	-0.842	-0.5145	Yes
105	POLR3F	1429686_at 1430328_at 1431999_at 1439075_at 1451773_s_at	18111	-0.847	-0.5121	Yes
106	PPIG	1434475_at 1435341_at 1436505_at	18167	-0.869	-0.5115	Yes
107	PTBP2	1423470_at 1423471_at 1444746_at 1446490_at 1458757_at	18181	-0.873	-0.5090	Yes
108	ZRF1	1417657_s_at 1425910_at 1448794_s_at 1454219_at	18402	-0.945	-0.5156	Yes
109	PPWD1	1456359_at	18413	-0.949	-0.5127	Yes
110	KIN	1427317_at	18604	-1.008	-0.5177	Yes
111	CREM	1418322_at 1430598_at 1430847_a_at 1449037_at	18635	-1.019	-0.5154	Yes
112	NFKBIA	1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at	18671	-1.030	-0.5133	Yes
113	IHPK2	1428373_at 1435319_at	18675	-1.030	-0.5097	Yes
114	SFRS12	1427134_at 1427135_at 1427136_s_at 1458056_at	18766	-1.066	-0.5100	Yes
115	MARCH7	1420609_at 1436893_a_at 1440966_at 1443329_at 1458690_at	18998	-1.169	-0.5164	Yes
116	ETS2	1416268_at 1437809_x_at 1447685_x_at	19198	-1.262	-0.5210	Yes
117	TLK2	1416944_a_at 1431827_a_at 1454018_at 1457357_at	19291	-1.314	-0.5204	Yes
118	SETDB1	1416670_at 1420974_at 1451833_a_at 1458215_at	19348	-1.347	-0.5181	Yes
119	KLF10	1416029_at	19419	-1.390	-0.5163	Yes
120	NFKBIE	1431843_a_at 1458299_s_at	19420	-1.390	-0.5113	Yes
121	RCHY1	1432144_a_at	19576	-1.489	-0.5130	Yes
122	VEGF	1420909_at 1451959_a_at	19669	-1.555	-0.5116	Yes
123	DCLRE1C	1457679_at 1458361_at	19677	-1.557	-0.5063	Yes
124	DPP8	1428697_at 1431064_at 1445705_x_at	19705	-1.575	-0.5018	Yes
125	ZNF3	1420675_at	19784	-1.634	-0.4995	Yes
126	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	19804	-1.648	-0.4944	Yes
127	DUSP6	1415834_at	20035	-1.829	-0.4983	Yes
128	STRN3	1423535_at 1423536_at 1441050_at 1441266_at 1457343_at	20172	-1.950	-0.4975	Yes
129	ZCCHC8	1423755_at 1441639_at	20345	-2.051	-0.4980	Yes
130	SMCHD1	1428251_at 1442497_at	20392	-2.091	-0.4925	Yes
131	MAFF	1418936_at	20419	-2.118	-0.4861	Yes
132	CLK4	1422886_a_at 1427663_a_at	20424	-2.121	-0.4786	Yes
133	SEC24A	1433934_at 1438121_at	20433	-2.136	-0.4712	Yes
134	NEDD9	1422818_at 1437132_x_at 1447885_x_at 1450767_at	20487	-2.189	-0.4657	Yes
135	THUMPD2	1428726_at	20581	-2.309	-0.4616	Yes
136	TIPARP	1426721_s_at 1452160_at 1452161_at	20721	-2.478	-0.4591	Yes
137	SLTM	1424452_at 1429624_at 1443426_at 1445720_at 1456683_at	20767	-2.533	-0.4519	Yes
138	FBXO38	1452255_at	20813	-2.603	-0.4446	Yes
139	PRPF3	1424314_at 1457390_at	20836	-2.633	-0.4361	Yes
140	RABGGTB	1419553_a_at	20857	-2.668	-0.4273	Yes
141	MORC3	1420091_s_at 1420092_at 1452224_at	20940	-2.784	-0.4210	Yes
142	TUFT1	1416689_at 1444694_at	21040	-2.979	-0.4148	Yes
143	ADNP	1423069_at	21105	-3.135	-0.4064	Yes
144	RNF111	1423304_a_at	21137	-3.191	-0.3962	Yes
145	BIRC2	1418854_at	21199	-3.358	-0.3869	Yes
146	IRF7	1417244_a_at	21245	-3.481	-0.3764	Yes
147	FOS	1423100_at	21307	-3.658	-0.3659	Yes
148	IER2	1416442_at	21321	-3.698	-0.3531	Yes
149	MARK3	1418316_a_at	21373	-3.884	-0.3414	Yes
150	TNFRSF9	1421481_at 1428034_a_at 1460469_at	21403	-3.996	-0.3283	Yes
151	SAT1	1420502_at	21461	-4.208	-0.3157	Yes
152	JUNB	1415899_at	21479	-4.278	-0.3010	Yes
153	CAB39	1418432_at 1418433_at	21509	-4.400	-0.2864	Yes
154	ARNTL	1425099_a_at 1446544_at 1457740_at	21561	-4.763	-0.2715	Yes
155	SUHW4	1426556_at 1457455_at	21564	-4.792	-0.2542	Yes
156	BACH1	1440831_at 1449311_at	21585	-4.990	-0.2371	Yes
157	JMJD1A	1426810_at	21588	-5.017	-0.2190	Yes
158	RELB	1417856_at	21596	-5.083	-0.2009	Yes
159	NCOA3	1422737_at 1457214_at 1458039_at	21605	-5.146	-0.1827	Yes
160	DUSP5	1437199_at	21635	-5.342	-0.1646	Yes
161	CLK1	1426124_a_at	21701	-5.906	-0.1463	Yes
162	LIG4	1439487_at	21707	-5.974	-0.1249	Yes
163	CRY1	1433733_a_at	21708	-5.979	-0.1032	Yes
164	CNOT2	1436980_x_at 1445017_at 1447212_at 1454602_s_at 1454603_a_at 1456576_x_at	21815	-7.205	-0.0820	Yes
165	PGS1	1430429_at 1440367_at 1454045_a_at 1454046_x_at 1455229_x_at	21881	-7.793	-0.0568	Yes
166	BIRC3	1421392_a_at 1425223_at	21905	-7.942	-0.0291	Yes
167	EGR1	1417065_at	21931	-8.413	0.0002	Yes