Details for gene set BROCKE

Table: GSEA Results Summary

Dataset	Set_01_SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus.phenotype_SCID_versus_ATM_plus.cls #SCID_versus_ATM_plus_repos
Phenotype	phenotype_SCID_versus_ATM_plus.cls#SCID_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	BROCKE_IL6
Enrichment Score (ES)	-0.5457006
Normalized Enrichment Score (NES)	-2.0795472
Nominal p-value	0.0
FDR q-value	0.0056440425
FWER p-Value	0.0090

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CEBPB	1418901_at 1427844_a_at	270	4.311	0.0070	No
2	EVI2A	1443894_at 1450241_a_at 1458788_at 1460055_at	312	4.048	0.0233	No
3	DYRK3	1424229_at	779	2.795	0.0145	No
4	MX1	1451905_a_at	1408	2.049	-0.0051	No
5	LRMP	1448409_at	1477	2.010	0.0008	No
6	LOH11CR2A	1426221_at 1426222_s_at	1548	1.978	0.0064	No
7	FOXO3A	1434831_a_at 1434832_at 1439598_at 1444226_at 1450236_at 1458279_at	1781	1.854	0.0041	No
8	GAS6	1417399_at 1459585_at	1816	1.837	0.0108	No
9	RAD1	1448414_at	1913	1.776	0.0144	No
10	TXNDC9	1424512_a_at 1436108_at 1436951_x_at	1989	1.734	0.0187	No
11	AGPAT7	1440207_at	2200	1.619	0.0164	No
12	SPP1	1449254_at	2210	1.614	0.0232	No
13	MUC1	1449199_at	2711	1.400	0.0066	No
14	NCBP2	1423045_at 1423046_s_at 1450847_at	2759	1.385	0.0106	No
15	PTPRG	1447906_at 1450122_at	2905	1.338	0.0100	No
16	CD44	1423760_at 1434376_at 1443265_at 1452483_a_at	3784	1.134	-0.0252	No
17	ID1	1425895_a_at	3846	1.120	-0.0229	No
18	PRDM1	1420425_at 1444997_at	4071	1.083	-0.0283	No
19	ACPP	1416297_s_at 1419832_s_at 1441975_at 1448290_at 1453943_a_at	4100	1.077	-0.0248	No
20	PTPN11	1421196_at 1427699_a_at 1451225_at	4414	1.030	-0.0345	No
21	POU2AF1	1416957_at	4524	1.018	-0.0349	No
22	CD180	1421547_at	4596	1.010	-0.0337	No
23	SC4MOL	1423078_a_at 1459627_at	4720	0.999	-0.0348	No
24	CAV2	1417327_at 1425955_at	4915	0.977	-0.0393	No
25	HBEGF	1418349_at 1418350_at	4924	0.976	-0.0353	No
26	CCL2	1420380_at	5080	0.954	-0.0381	No
27	MEF2B	1421541_a_at	5473	0.899	-0.0521	No
28	MAPKAPK2	1426648_at	5680	0.872	-0.0576	No
29	SOCS3	1416576_at 1455899_x_at 1456212_x_at	6128	0.814	-0.0744	No
30	BHLHB2	1418025_at	6240	0.800	-0.0759	No
31	PTK9	1420873_at 1420874_at 1420875_at	6429	0.777	-0.0811	No
32	RAPGEF4	1421622_a_at 1425518_at 1440274_at 1444034_at	6558	0.761	-0.0835	No
33	PLEKHB2	1447810_x_at 1460341_at	6854	0.728	-0.0938	No
34	ZFP36L2	1437626_at 1439054_at 1451034_at	7111	0.698	-0.1024	No
35	RGS16	1426037_a_at 1451452_a_at 1455265_a_at	7225	0.685	-0.1045	No
36	DOHH	1417322_at 1436402_at	7346	0.669	-0.1070	No
37	PCTK2	1435143_at 1446130_at 1446272_at	7943	0.606	-0.1316	No
38	ATP2B4	1445701_at	8075	0.591	-0.1349	No
39	MYLK	1425504_at 1425505_at 1425506_at	8626	0.537	-0.1577	No
40	RHOBTB3	1429661_at 1433647_s_at 1447869_x_at 1453227_at 1457009_at	9448	0.457	-0.1933	No
41	PDGFRA	1421916_at 1421917_at 1438946_at	9680	0.432	-0.2020	No
42	HSPA1A	1452388_at	9806	0.421	-0.2058	No
43	SNF1LK	1419766_at 1459601_at	10479	0.357	-0.2350	No
44	IRF1	1448436_a_at	10804	0.325	-0.2484	No
45	DPM1	1419353_at 1449438_at	10962	0.311	-0.2542	No
46	SRPK2	1417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at	11407	0.269	-0.2734	No
47	MAZ	1427099_at	11722	0.237	-0.2867	No
48	EEF1E1	1444757_at 1449044_at	11791	0.229	-0.2888	No
49	PTP4A1	1419024_at 1455002_at	11989	0.209	-0.2969	No
50	SOX2	1416967_at	12142	0.197	-0.3030	No
51	ICAM1	1424067_at	12150	0.196	-0.3024	No
52	STAT3	1424272_at 1426587_a_at 1459961_a_at 1460700_at	12643	0.151	-0.3243	No
53	CADPS	1444488_at 1445586_at 1448955_s_at 1458298_at	12833	0.134	-0.3324	No
54	ELL2	1450744_at 1458569_at	13954	0.012	-0.3836	No
55	JUN	1417409_at 1448694_at	14535	-0.057	-0.4100	No
56	TNFSF10	1420412_at 1439680_at 1459913_at	14624	-0.069	-0.4137	No
57	SLA	1420818_at 1420819_at 1441761_at 1447813_x_at	14873	-0.100	-0.4246	No
58	GNA13	1422555_s_at 1422556_at 1430295_at 1433749_at 1446722_at 1450656_at 1453470_a_at 1460317_s_at	15162	-0.138	-0.4372	No
59	BCL2L11	1426334_a_at 1435448_at 1435449_at 1456005_a_at 1456006_at 1459794_at	15378	-0.170	-0.4463	No
60	CCNC	1417861_at 1428570_at 1454144_a_at 1454336_at	15397	-0.173	-0.4464	No
61	LTBP1	1419786_at 1440678_at 1446232_at 1447547_at 1448870_at 1457852_at 1458739_at	15406	-0.175	-0.4459	No
62	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	15505	-0.190	-0.4496	No
63	GADD45B	1420197_at 1449773_s_at 1450971_at	15729	-0.221	-0.4588	No
64	WIPI1	1424917_a_at 1427323_s_at 1438709_at 1439060_s_at 1452392_a_at 1456624_at	15878	-0.248	-0.4645	No
65	POU2F2	1427713_x_at 1427725_a_at	16237	-0.317	-0.4795	No
66	GATM	1423569_at	16274	-0.325	-0.4797	No
67	EIF5	1415723_at 1433631_at 1454663_at 1454664_a_at 1456256_at	16415	-0.351	-0.4845	No
68	DUSP3	1425608_at 1434472_at 1456769_at	16548	-0.380	-0.4888	No
69	HNRPU	1423050_s_at 1423051_at 1434390_at 1434391_at 1450849_at	16786	-0.441	-0.4977	No
70	PLSCR1	1453181_x_at	17004	-0.496	-0.5055	No
71	DAPK1	1426915_at 1427358_a_at 1445032_at	17095	-0.521	-0.5072	No
72	ANAPC10	1429375_at 1429376_s_at 1444033_at 1458390_at	17413	-0.611	-0.5190	No
73	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	17852	-0.755	-0.5357	No
74	ST3GAL6	1443740_at 1447841_x_at 1449078_at 1449079_s_at 1454246_at 1459354_at	17992	-0.802	-0.5385	No
75	SLC2A3	1421924_at 1427770_a_at 1437052_s_at 1455898_x_at	18009	-0.809	-0.5356	No
76	SLC16A6	1417884_at	18076	-0.835	-0.5349	No
77	LDLR	1421821_at 1431947_at 1450383_at 1459403_at	18104	-0.845	-0.5323	No
78	POLR3F	1429686_at 1430328_at 1431999_at 1439075_at 1451773_s_at	18111	-0.847	-0.5288	No
79	ARFGAP3	1426534_a_at 1430904_at	18121	-0.850	-0.5254	No
80	LITAF	1416303_at 1416304_at	18183	-0.875	-0.5243	No
81	CD8B	1426170_a_at 1446372_at 1448569_at 1458652_at	18450	-0.965	-0.5321	No
82	PHTF2	1437067_at 1437637_at 1444559_at	18462	-0.968	-0.5283	No
83	ADIPOR2	1434329_s_at 1437864_at	18843	-1.095	-0.5408	Yes
84	TGIF	1422286_a_at	18917	-1.127	-0.5391	Yes
85	MAP3K8	1419208_at	18980	-1.164	-0.5367	Yes
86	USP52	1426700_a_at	19020	-1.177	-0.5332	Yes
87	DNAJA2	1417182_at 1417183_at 1429476_s_at 1457233_at	19036	-1.183	-0.5286	Yes
88	HCK	1446553_at 1449455_at	19184	-1.256	-0.5297	Yes
89	STCH	1429502_at 1430026_at 1433772_at 1453172_at	19236	-1.286	-0.5262	Yes
90	MARCKS	1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at	19290	-1.314	-0.5228	Yes
91	IL6ST	1421239_at 1437303_at 1452843_at 1460295_s_at	19454	-1.411	-0.5239	Yes
92	RNF13	1420620_a_at 1443178_at 1443407_at 1451074_at	19562	-1.482	-0.5221	Yes
93	PTP4A3	1418181_at 1418182_at	19791	-1.642	-0.5252	Yes
94	GRB2	1418508_a_at 1449111_a_at	19792	-1.642	-0.5179	Yes
95	MCL1	1416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at	19804	-1.648	-0.5110	Yes
96	IRF4	1421173_at 1421174_at	19973	-1.781	-0.5107	Yes
97	CXCR4	1448710_at	19996	-1.803	-0.5036	Yes
98	SBNO2	1439349_at 1441840_x_at 1443721_x_at 1458308_at	20138	-1.921	-0.5014	Yes
99	MAFF	1418936_at	20419	-2.118	-0.5047	Yes
100	TMED7	1419917_s_at 1419918_at 1427314_at 1427315_at 1429187_at	20612	-2.344	-0.5030	Yes
101	NMI	1425719_a_at	20625	-2.363	-0.4930	Yes
102	EVI2B	1426505_at	20704	-2.454	-0.4855	Yes
103	SGK	1416041_at	20724	-2.482	-0.4752	Yes
104	PIM1	1423006_at 1435458_at	20778	-2.545	-0.4662	Yes
105	FLOT1	1448559_at	21034	-2.968	-0.4646	Yes
106	ZBTB11	1454826_at	21318	-3.690	-0.4610	Yes
107	IER2	1416442_at	21321	-3.698	-0.4445	Yes
108	SH2D2A	1449105_at	21347	-3.804	-0.4286	Yes
109	SOCS1	1440047_at 1450446_a_at	21397	-3.962	-0.4130	Yes
110	DNAJB9	1417191_at	21432	-4.103	-0.3962	Yes
111	AP1S2	1437998_at 1447903_x_at 1452657_at 1456252_x_at 1460036_at	21443	-4.151	-0.3780	Yes
112	JUNB	1415899_at	21479	-4.278	-0.3604	Yes
113	ISGF3G	1421322_a_at	21500	-4.365	-0.3417	Yes
114	PIM2	1417216_at	21501	-4.380	-0.3220	Yes
115	AMPD1	1434722_at	21502	-4.384	-0.3024	Yes
116	BCL3	1418133_at	21555	-4.716	-0.2836	Yes
117	GADD45A	1449519_at	21621	-5.263	-0.2629	Yes
118	DUSP5	1437199_at	21635	-5.342	-0.2395	Yes
119	IFNGR1	1443602_at 1448167_at	21699	-5.881	-0.2160	Yes
120	STK17B	1423452_at 1430165_at 1450997_at	21734	-6.237	-0.1896	Yes
121	STAT1	1420915_at 1440481_at 1450033_a_at 1450034_at	21776	-6.782	-0.1610	Yes
122	ID3	1416630_at	21832	-7.406	-0.1303	Yes
123	BCL6	1421818_at 1450381_a_at	21833	-7.407	-0.0970	Yes
124	RCN2	1422449_s_at 1444248_at	21835	-7.431	-0.0637	Yes
125	ZFP36	1452519_a_at	21841	-7.493	-0.0303	Yes
126	RALA	1423137_at 1450870_at 1456049_at	21862	-7.704	0.0034	Yes