Details for gene set RNA_PROCESSING[GSEA]

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	ATM_minus
GeneSet	RNA_PROCESSING
Enrichment Score (ES)	0.4524232
Normalized Enrichment Score (NES)	1.7354033
Nominal p-value	0.0015948963
FDR q-value	0.49224886
FWER p-Value	0.954

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SETX	1433794_at 1440459_at 1458080_at	89	5.411	0.0250	Yes
2	IVNS1ABP	1420961_a_at 1425718_a_at 1450084_s_at	111	4.887	0.0503	Yes
3	SSB	1416421_a_at 1416422_a_at 1416423_x_at 1453928_a_at	165	4.214	0.0705	Yes
4	NOLC1	1428869_at 1428870_at 1450087_a_at	190	3.938	0.0906	Yes
5	NUFIP1	1448802_at	196	3.885	0.1112	Yes
6	FUSIP1	1418526_at 1418527_a_at 1423982_at 1449121_at	229	3.646	0.1293	Yes
7	CRNKL1	1420849_at 1420850_at	241	3.591	0.1481	Yes
8	INTS12	1428985_at 1452316_at	261	3.474	0.1659	Yes
9	CSTF2	1419644_at 1419645_at 1455523_at	289	3.323	0.1826	Yes
10	INTS4	1423806_at	331	3.176	0.1977	Yes
11	DHX15	1416144_a_at 1416145_at	335	3.164	0.2146	Yes
12	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	361	3.083	0.2300	Yes
13	CPSF6	1428231_at 1428232_at 1428233_at 1428234_at 1437372_at 1439188_at 1447381_at 1459687_x_at	383	3.049	0.2455	Yes
14	DGCR8	1422981_at 1435439_at 1446169_at 1455311_at	386	3.047	0.2617	Yes
15	RNGTT	1425844_a_at 1448714_at	423	2.974	0.2761	Yes
16	IGF2BP3	1422610_s_at 1422611_s_at 1433731_at 1433732_x_at 1436145_at 1450687_at 1453957_a_at 1459016_at	536	2.718	0.2855	Yes
17	SF3A3	1423811_at	594	2.610	0.2969	Yes
18	POP4	1448419_at	601	2.590	0.3106	Yes
19	INTS8	1431096_at 1435250_at 1456775_at 1460609_at	612	2.560	0.3239	Yes
20	SMNDC1	1429043_at 1452999_at	647	2.493	0.3357	Yes
21	INTS7	1428531_at 1428532_at 1443045_at 1452822_at 1458590_at	649	2.486	0.3490	Yes
22	EXOSC3	1431502_a_at	708	2.375	0.3591	Yes
23	DDX20	1416751_a_at	903	2.094	0.3615	Yes
24	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	990	1.984	0.3682	Yes
25	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	1037	1.942	0.3765	Yes
26	NOL5A	1426533_at 1455035_s_at	1117	1.866	0.3829	Yes
27	PRPF4B	1425497_a_at 1425498_at 1436427_at 1451732_at 1451909_a_at 1455696_a_at	1144	1.843	0.3917	Yes
28	INTS2	1429461_at 1436247_at	1146	1.843	0.4015	Yes
29	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	1230	1.777	0.4073	Yes
30	ELAVL4	1428741_at 1450258_a_at 1452894_at 1457399_at	1599	1.560	0.3988	Yes
31	PHF5A	1424170_at	1625	1.545	0.4059	Yes
32	SF3A2	1450576_a_at 1455546_s_at	1672	1.526	0.4120	Yes
33	NSUN2	1423850_at 1453759_at	1791	1.459	0.4144	Yes
34	NONO	1415820_x_at 1431239_at 1448103_s_at	2049	1.332	0.4098	Yes
35	SFRS10	1419543_a_at 1427432_a_at 1441466_at 1446496_at	2128	1.299	0.4132	Yes
36	KIN	1427317_at	2140	1.293	0.4196	Yes
37	SNRPD3	1422884_at 1422885_at 1449629_s_at	2144	1.292	0.4264	Yes
38	GEMIN6	1424300_at	2236	1.252	0.4290	Yes
39	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	2384	1.197	0.4287	Yes
40	SNRPB2	1426613_a_at 1452422_a_at	2492	1.158	0.4300	Yes
41	NOL3	1444786_at 1451503_at	2555	1.141	0.4333	Yes
42	AARS	1423685_at 1451083_s_at	2573	1.133	0.4386	Yes
43	RBPMS	1425652_s_at 1429359_s_at 1437161_x_at 1444765_at 1455936_a_at 1459078_at	2741	1.086	0.4368	Yes
44	DUSP11	1452594_at 1454785_at	2770	1.081	0.4413	Yes
45	NOLA2	1416605_at 1416606_s_at	2933	1.039	0.4394	Yes
46	SFRS2IP	1434691_at 1443085_at 1452884_at 1452885_at 1460445_at	2937	1.038	0.4449	Yes
47	GEMIN5	1436310_at 1436311_at 1455453_at	2992	1.025	0.4479	Yes
48	U2AF1	1422509_at	3069	1.010	0.4499	Yes
49	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	3295	0.966	0.4447	Yes
50	HNRPF	1450963_at	3359	0.952	0.4469	Yes
51	BCAS2	1418234_s_at 1437262_x_at 1458219_at	3540	0.913	0.4436	Yes
52	GRSF1	1433457_s_at 1433824_x_at 1437838_x_at 1439366_at	3553	0.911	0.4479	Yes
53	HNRPDL	1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at	3571	0.907	0.4520	Yes
54	DHX38	1426786_s_at 1453751_at	3667	0.884	0.4524	Yes
55	CUGBP1	1423932_at 1425932_a_at 1426407_at 1426408_at 1427413_a_at	3874	0.843	0.4475	No
56	SFRS9	1417727_at	3882	0.842	0.4517	No
57	PTBP1	1424874_a_at 1450443_at 1458284_at	4773	0.679	0.4145	No
58	NCBP2	1423045_at 1423046_s_at 1450847_at	4790	0.676	0.4174	No
59	AGGF1	1425354_a_at	5378	0.583	0.3936	No
60	KHDRBS1	1418628_at 1418630_at	5532	0.560	0.3896	No
61	GEMIN7	1435764_a_at	5952	0.507	0.3731	No
62	RPS14	1436586_x_at	5976	0.505	0.3748	No
63	CDC2L1	1418841_s_at	6131	0.484	0.3703	No
64	PRPF18	1429614_at	6166	0.481	0.3713	No
65	PPAN	1423703_at	6791	0.409	0.3449	No
66	HNRPD	1425142_a_at 1446083_at	7324	0.351	0.3224	No
67	EXOSC2	1426630_at 1446994_at	7606	0.321	0.3112	No
68	METTL1	1419122_at 1439155_at 1447683_x_at	7709	0.313	0.3082	No
69	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	7965	0.290	0.2980	No
70	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	8287	0.257	0.2847	No
71	SFPQ	1423795_at 1423796_at 1436898_at 1438458_a_at 1438459_x_at 1439058_at	8629	0.223	0.2703	No
72	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	8890	0.200	0.2594	No
73	PPIG	1434475_at 1435341_at 1436505_at	8912	0.197	0.2595	No
74	TXNL4A	1419179_at	8958	0.193	0.2585	No
75	CPSF3	1422855_at 1437328_x_at 1437852_x_at	9623	0.134	0.2287	No
76	DDX39	1423643_at 1438168_x_at 1438287_x_at 1451065_a_at 1455814_x_at	9785	0.119	0.2220	No
77	LSM6	1431054_at 1437108_at 1437109_s_at 1455926_at	9883	0.111	0.2181	No
78	SF1	1422321_a_at 1423750_a_at 1423751_at 1459765_s_at 1459766_x_at	9904	0.108	0.2178	No
79	KHSRP	1428174_x_at 1436813_x_at 1452690_at	9965	0.104	0.2156	No
80	SNRPD1	1416336_s_at	10296	0.078	0.2009	No
81	LSM5	1418656_at	10591	0.053	0.1877	No
82	RBMY1A1	1420786_a_at	10808	0.035	0.1779	No
83	INTS6	1423274_at 1423275_at 1436089_at 1443128_at	10862	0.031	0.1757	No
84	CSTF3	1424723_s_at 1443909_at	11465	-0.025	0.1482	No
85	RNMT	1436328_at 1440002_at 1446442_at 1453106_a_at	11665	-0.044	0.1393	No
86	USP39	1437007_x_at 1460209_at	11889	-0.062	0.1294	No
87	UPF1	1419685_at	12500	-0.118	0.1020	No
88	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12628	-0.128	0.0969	No
89	WDR57	1428264_at 1452713_a_at	12904	-0.155	0.0851	No
90	SRPK2	1417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at	13008	-0.165	0.0813	No
91	HNRPUL1	1451984_at	13037	-0.168	0.0809	No
92	PRPF31	1448633_at 1453005_at 1457083_at	13078	-0.171	0.0800	No
93	LSM4	1448622_at	13372	-0.197	0.0676	No
94	CPSF1	1417665_a_at	13443	-0.203	0.0654	No
95	BICD1	1427530_at 1437548_at 1438701_at 1451684_a_at	13886	-0.244	0.0465	No
96	ZNF638	1417791_a_at 1417792_at 1447983_at 1458523_at	14045	-0.261	0.0406	No
97	RBM6	1417213_a_at 1440223_at 1452466_a_at 1458912_at	14430	-0.299	0.0246	No
98	SNRPF	1428672_at	14478	-0.305	0.0241	No
99	SRPK1	1454042_a_at 1455107_at	14582	-0.315	0.0211	No
100	SYNCRIP	1422768_at 1422769_at 1426402_at 1428546_at 1450743_s_at	14703	-0.329	0.0173	No
101	LSM3	1448536_at	14770	-0.337	0.0161	No
102	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	14869	-0.348	0.0135	No
103	ADAT1	1420748_a_at 1425390_at 1444049_at	14938	-0.355	0.0123	No
104	SNW1	1429002_at 1429003_at 1459026_at	15023	-0.365	0.0104	No
105	PRPF8	1422453_at	15399	-0.406	-0.0046	No
106	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	15645	-0.436	-0.0135	No
107	SARS	1426257_a_at 1452000_s_at	16324	-0.522	-0.0419	No
108	ASCC3L1	1454772_at 1460552_at	17034	-0.626	-0.0710	No
109	SPOP	1416524_at 1416525_at 1444578_at 1447827_x_at 1455510_at 1458886_at	17100	-0.636	-0.0706	No
110	INTS10	1439712_at	17159	-0.647	-0.0698	No
111	DBR1	1451641_at	17344	-0.677	-0.0746	No
112	TRNT1	1425561_at 1425562_s_at	17452	-0.695	-0.0758	No
113	INTS5	1417887_at 1434011_a_at 1434012_at	17584	-0.718	-0.0779	No
114	LSM1	1423873_at 1441452_at	17634	-0.728	-0.0762	No
115	DHX16	1423925_at	17874	-0.776	-0.0830	No
116	SLBP	1430058_at 1460168_at	18125	-0.829	-0.0901	No
117	FBL	1416684_at 1416685_s_at	18145	-0.833	-0.0864	No
118	ZNF346	1417088_at 1448581_at	18212	-0.853	-0.0849	No
119	SIP1	1451044_at	18310	-0.876	-0.0846	No
120	SNRP70	1429009_at 1429010_at 1429011_x_at 1451104_a_at 1457047_at	18499	-0.920	-0.0883	No
121	DDX54	1438853_x_at 1447882_x_at 1460396_at	18527	-0.926	-0.0846	No
122	FARS2	1431354_a_at 1439406_x_at	18546	-0.933	-0.0804	No
123	SFRS7	1424033_at 1424883_s_at 1436871_at	18695	-0.964	-0.0820	No
124	DHX8	1426629_at	18696	-0.965	-0.0768	No
125	CSTF1	1417117_at 1448597_at	18947	-1.008	-0.0829	No
126	SFRS4	1448778_at	18986	-1.014	-0.0792	No
127	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	19075	-1.028	-0.0777	No
128	RBM3	1429169_at	19113	-1.034	-0.0738	No
129	GEMIN4	1433622_at	19225	-1.058	-0.0732	No
130	SNRPN	1415895_at 1415896_x_at 1432096_at 1435716_x_at	19313	-1.082	-0.0714	No
131	SNRPB	1419260_a_at 1437193_s_at	19808	-1.239	-0.0874	No
132	RBMS2	1423540_at 1433979_at	19873	-1.261	-0.0836	No
133	SFRS8	1424997_at 1433677_at 1434966_at 1438674_a_at 1438675_at 1443905_at 1454683_at 1456880_at	19889	-1.268	-0.0775	No
134	DDX23	1430050_at	20026	-1.330	-0.0765	No
135	RBMS1	1418703_at 1434005_at 1441437_at 1458578_at 1459968_at	20132	-1.382	-0.0739	No
136	CPSF3L	1423964_at	20406	-1.515	-0.0783	No
137	SNRPD2	1452680_at	20486	-1.550	-0.0736	No
138	DDX17	1437773_x_at 1439037_at 1452155_a_at	20908	-1.849	-0.0830	No
139	EXOSC7	1448365_at	20935	-1.866	-0.0742	No
140	SF3B3	1415985_at 1430075_at	21067	-1.964	-0.0696	No
141	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	21222	-2.084	-0.0655	No
142	PRPF3	1424314_at 1457390_at	21533	-2.495	-0.0663	No
143	INTS3	1423921_at 1423922_s_at	21908	-7.184	-0.0449	No
144	PABPC1	1418883_a_at 1419500_at 1453840_at	21936	-8.578	-0.0000	No