Details for gene set CYTOSKELETAL_PROTEIN

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	SCID
GeneSet	CYTOSKELETAL_PROTEIN_BINDING
Enrichment Score (ES)	-0.3886001
Normalized Enrichment Score (NES)	-1.5734658
Nominal p-value	0.0026385225
FDR q-value	1.0
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	KATNA1	1450949_at	210	3.764	0.0184	No
2	LRPPRC	1424353_at	294	3.288	0.0391	No
3	TNNI3	1422536_at	570	2.668	0.0464	No
4	UNC84B	1433832_at 1439238_at	664	2.452	0.0605	No
5	ABI1	1423177_a_at 1423178_at 1450890_a_at	1206	1.799	0.0490	No
6	TUBGCP5	1426518_at 1439923_at 1439924_x_at 1457282_x_at	1306	1.734	0.0574	No
7	RAB11FIP5	1427405_s_at 1434314_s_at	1377	1.697	0.0669	No
8	ANLN	1433543_at 1439648_at	1418	1.676	0.0776	No
9	ABI2	1433985_at 1436984_at 1444783_at 1458053_at 1460153_at	1536	1.609	0.0842	No
10	KIF5B	1418427_at 1418428_at 1418429_at 1418430_at 1418431_at	1645	1.536	0.0907	No
11	ADD2	1421975_a_at 1435287_at 1451914_a_at	1738	1.485	0.0975	No
12	APOE	1432466_a_at	1886	1.413	0.1013	No
13	ARL8B	1418819_at 1428137_at 1428138_s_at	2340	1.211	0.0896	No
14	SSH2	1456153_at	2498	1.155	0.0910	No
15	TARDBP	1423723_s_at 1428467_at 1434419_s_at 1436318_at 1455655_a_at	2662	1.111	0.0918	No
16	SVIL	1427662_at 1460694_s_at 1460735_at	2913	1.043	0.0881	No
17	SYNE1	1421545_a_at 1455225_at 1455493_at	3084	1.006	0.0878	No
18	MAPRE1	1422764_at 1422765_at 1428819_at 1428820_at 1450740_a_at	3155	0.995	0.0920	No
19	JUP	1426873_s_at	3447	0.932	0.0856	No
20	VAPB	1423152_at 1436079_s_at 1445370_at 1458501_at	3726	0.872	0.0794	No
21	MAP1S	1454732_at	3817	0.855	0.0816	No
22	TNNT2	1418726_a_at 1424967_x_at 1440424_at	3843	0.850	0.0868	No
23	ACTN1	1427385_s_at 1428585_at 1452415_at	4204	0.783	0.0761	No
24	MAPK8IP3	1416437_a_at 1425975_a_at 1436676_at 1460628_at	4327	0.761	0.0762	No
25	BRCA2	1419076_a_at	4532	0.720	0.0722	No
26	KIF1B	1423994_at 1423995_at 1425270_at 1451200_at 1451642_at 1451762_a_at 1455182_at 1458426_at	4559	0.716	0.0764	No
27	BAIAP2	1425656_a_at 1435128_at 1451027_at 1451028_at	4795	0.675	0.0706	No
28	CCR5	1422259_a_at 1422260_x_at 1424727_at	5137	0.617	0.0596	No
29	CAPZB	1417259_a_at 1424168_a_at 1431668_at 1453960_a_at	5163	0.613	0.0630	No
30	MARCKS	1415971_at 1415972_at 1430311_at 1437034_x_at 1456028_x_at	5259	0.599	0.0631	No
31	ARPC4	1423588_at 1423589_at	5564	0.556	0.0533	No
32	ACTN2	1448327_at 1456968_at	6106	0.487	0.0321	No
33	ANK1	1419421_at 1425677_a_at 1443291_at 1450627_at 1452512_a_at	6503	0.441	0.0173	No
34	CYFIP1	1416329_at 1445327_at 1457134_at 1457615_at	6979	0.389	-0.0016	No
35	TRIM63	1438704_at	7076	0.378	-0.0032	No
36	HOOK3	1443857_at 1446737_a_at	7101	0.375	-0.0015	No
37	MARK4	1439051_a_at 1456618_at	7566	0.325	-0.0204	No
38	S100B	1419383_at 1434342_at	7747	0.309	-0.0263	No
39	GABARAPL2	1423187_at 1441376_at 1444956_at 1459477_at	8101	0.276	-0.0405	No
40	UXT	1418986_a_at	8224	0.264	-0.0441	No
41	TNNT1	1419606_a_at	8250	0.261	-0.0433	No
42	CDK5RAP2	1443976_at 1447103_at 1452618_at	8514	0.233	-0.0536	No
43	RACGAP1	1421546_a_at 1441889_x_at 1451358_a_at	9255	0.166	-0.0863	No
44	DCX	1418139_at 1418140_at 1418141_at 1448974_at	10061	0.097	-0.1225	No
45	BIRC5	1424278_a_at	10251	0.082	-0.1306	No
46	RHCG	1417362_at	10331	0.074	-0.1337	No
47	TNNC1	1418370_at	10674	0.046	-0.1490	No
48	MAPK8IP2	1418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at	10714	0.043	-0.1505	No
49	SORBS2	1437197_at 1441624_at 1446744_at	10951	0.022	-0.1611	No
50	MAPK8IP1	1425679_a_at 1440619_at	11065	0.011	-0.1662	No
51	APC	1420956_at 1420957_at 1435543_at 1450056_at	11193	0.000	-0.1720	No
52	STMN1	1415849_s_at	11332	-0.013	-0.1783	No
53	SCIN	1450276_a_at	11967	-0.069	-0.2068	No
54	DYNC1I1	1416361_a_at	12130	-0.084	-0.2137	No
55	IQGAP2	1433885_at 1459894_at	12249	-0.093	-0.2184	No
56	PKD2L1	1457105_at	12266	-0.095	-0.2184	No
57	ARPC1A	1416079_a_at	12302	-0.098	-0.2193	No
58	ABRA	1458455_at	12506	-0.118	-0.2277	No
59	RHAG	1419014_at	12605	-0.126	-0.2313	No
60	SSH1	1433874_at 1438253_at 1439237_a_at 1455854_a_at	12614	-0.126	-0.2307	No
61	LIMA1	1422499_at 1425654_a_at 1435726_at 1435727_s_at 1450629_at	12670	-0.132	-0.2322	No
62	CXCR4	1448710_at	12847	-0.149	-0.2392	No
63	CGN	1430329_at 1435155_at	13080	-0.171	-0.2486	No
64	NDE1	1435737_a_at	13130	-0.176	-0.2495	No
65	MYO6	1421120_at 1433942_at 1435559_at	13174	-0.179	-0.2501	No
66	TMOD2	1430153_at 1431326_a_at 1435060_at 1437167_at 1439223_at 1451301_at	13204	-0.182	-0.2501	No
67	COTL1	1416001_a_at 1416002_x_at 1425801_x_at 1436236_x_at 1436838_x_at 1437811_x_at	13355	-0.196	-0.2555	No
68	CALD1	1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at	13541	-0.212	-0.2624	No
69	CENPJ	1423140_at 1423141_at 1437643_at 1450872_s_at	13687	-0.224	-0.2674	No
70	ADD1	1420953_at 1420954_a_at 1439125_at 1450054_at	13698	-0.225	-0.2662	No
71	MYBPC3	1418551_at	13902	-0.246	-0.2737	No
72	ESPN	1423005_a_at 1458260_at	13945	-0.250	-0.2737	No
73	HPCA	1425833_a_at 1450930_at	14074	-0.263	-0.2776	No
74	PACSIN3	1416995_at 1431534_at 1437834_s_at 1456191_x_at	14229	-0.279	-0.2826	No
75	MEFV	1460283_at	14476	-0.304	-0.2916	No
76	NRAP	1421253_at	14481	-0.305	-0.2895	No
77	SORBS3	1419329_at	14619	-0.320	-0.2934	No
78	MYH10	1441057_at 1452740_at	14739	-0.333	-0.2964	No
79	DLG1	1415691_at 1445798_at 1450768_at 1459635_at	15106	-0.374	-0.3104	No
80	GC	1426547_at	15411	-0.407	-0.3213	No
81	MYLIP	1424988_at	15981	-0.476	-0.3439	No
82	SHROOM3	1422629_s_at 1432377_x_at 1442952_at 1445401_at 1451854_a_at 1453714_a_at 1454211_a_at	16124	-0.495	-0.3467	No
83	MAPT	1417885_at 1424718_at 1424719_a_at 1445634_at 1455028_at	16347	-0.525	-0.3530	No
84	FLNA	1426677_at	16411	-0.532	-0.3519	No
85	ABLIM1	1442376_at 1453103_at 1454708_at 1460120_at	16416	-0.533	-0.3481	No
86	MYOZ1	1448636_at 1460202_at	16464	-0.540	-0.3462	No
87	SPTBN4	1425116_a_at	16669	-0.573	-0.3513	No
88	CLASP1	1427353_at 1452265_at 1459233_at 1460102_at	16777	-0.586	-0.3518	No
89	TTN	1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at	16786	-0.588	-0.3478	No
90	KPTN	1423438_at 1440025_at	16837	-0.596	-0.3457	No
91	RPH3AL	1431695_at	16988	-0.618	-0.3479	No
92	MYO9B	1418031_at 1438533_at 1459110_at	17055	-0.629	-0.3463	No
93	PALLD	1427228_at 1433768_at 1440635_at 1440693_at	17558	-0.714	-0.3640	No
94	CNN2	1450981_at	17663	-0.733	-0.3633	No
95	PARVG	1416875_at 1416876_at	18008	-0.801	-0.3731	No
96	ATG4C	1434014_at 1441440_at	18347	-0.884	-0.3820	Yes
97	SYNPO	1427045_at 1434089_at	18358	-0.887	-0.3758	Yes
98	NEXN	1435649_at 1446084_at	18392	-0.897	-0.3707	Yes
99	ARL8A	1424640_at	18477	-0.914	-0.3677	Yes
100	DST	1421117_at 1421276_a_at 1423626_at 1442395_at 1446943_at 1450119_at 1458075_at 1459098_at 1459356_at	18573	-0.938	-0.3651	Yes
101	CLASP2	1424836_a_at 1427328_a_at 1429976_at 1440802_at 1441726_at 1443320_at 1456911_at	18697	-0.965	-0.3635	Yes
102	MTSS1	1424826_s_at 1434036_at 1440847_at 1443729_at 1446284_at 1451496_at	18827	-0.989	-0.3621	Yes
103	IPP	1421771_a_at	18906	-1.002	-0.3582	Yes
104	CTNNA1	1437275_at 1437807_x_at 1443662_at 1448149_at	18949	-1.008	-0.3526	Yes
105	PKD2	1417753_at 1441870_s_at	18989	-1.014	-0.3468	Yes
106	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	19004	-1.017	-0.3399	Yes
107	RAE1	1429528_at 1444256_at 1459822_at	19269	-1.070	-0.3440	Yes
108	ACTA1	1427735_a_at	19349	-1.094	-0.3395	Yes
109	NCALD	1417568_at 1417569_at 1439730_at 1444466_at 1458037_at	19350	-1.094	-0.3313	Yes
110	TLN1	1436042_at 1448402_at 1457782_at	19377	-1.100	-0.3243	Yes
111	EGFR	1424932_at 1432647_at 1435888_at 1451530_at 1454313_at 1457563_at 1460420_a_at	19516	-1.141	-0.3221	Yes
112	ARHGEF2	1421042_at 1421043_s_at 1427646_a_at	19528	-1.143	-0.3141	Yes
113	WASF2	1438683_at	19578	-1.156	-0.3077	Yes
114	SORBS1	1417358_s_at 1425826_a_at 1428471_at 1436737_a_at 1440311_at 1442401_at 1443983_at 1455967_at	20007	-1.320	-0.3175	Yes
115	CROCC	1427338_at	20064	-1.352	-0.3100	Yes
116	PRNP	1416130_at 1446507_at 1448233_at	20206	-1.410	-0.3059	Yes
117	DBNL	1460334_at	20258	-1.438	-0.2976	Yes
118	LSP1	1417756_a_at	20291	-1.457	-0.2882	Yes
119	TUBGCP3	1426707_at	20414	-1.519	-0.2824	Yes
120	RABGAP1	1424188_at 1441217_at 1441800_at 1443535_at 1457370_at 1460486_at	20460	-1.540	-0.2730	Yes
121	ARFGEF1	1415711_at 1437104_at 1444175_at 1456917_at	20566	-1.608	-0.2658	Yes
122	TMOD4	1449969_at	20637	-1.650	-0.2567	Yes
123	POLB	1425371_at 1434229_a_at	20649	-1.657	-0.2449	Yes
124	CAPZA1	1439455_x_at 1440380_at	20744	-1.719	-0.2364	Yes
125	CDC42EP3	1422642_at 1450700_at	21192	-2.052	-0.2416	Yes
126	TMOD3	1423088_at 1423089_at 1438556_a_at 1439626_at 1455708_at 1456913_at	21205	-2.063	-0.2267	Yes
127	GABARAPL1	1416418_at 1416419_s_at 1442572_at	21332	-2.220	-0.2160	Yes
128	FXYD5	1418296_at	21361	-2.252	-0.2005	Yes
129	ACTN4	1423449_a_at 1444258_at	21404	-2.336	-0.1850	Yes
130	PXN	1424027_at 1426085_a_at 1456135_s_at	21435	-2.375	-0.1686	Yes
131	GABARAP	1416937_at	21559	-2.536	-0.1554	Yes
132	MYH9	1417472_at 1420170_at 1420171_s_at 1420172_at 1440708_at	21598	-2.642	-0.1374	Yes
133	TUBGCP6	1435090_at	21614	-2.678	-0.1181	Yes
134	ATG4D	1433918_at 1439130_at	21632	-2.725	-0.0986	Yes
135	SMTN	1452469_a_at	21860	-4.679	-0.0741	Yes
136	PDLIM5	1429783_at 1438186_at 1442710_at 1446339_at	21872	-5.168	-0.0361	Yes
137	VCL	1416156_at 1416157_at 1445256_at	21875	-5.223	0.0028	Yes