Details for gene set V$SP1_Q4

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	ATM_minus
GeneSet	V$SP1_Q4_01
Enrichment Score (ES)	0.34672216
Normalized Enrichment Score (NES)	1.3877375
Nominal p-value	0.016
FDR q-value	0.85530066
FWER p-Value	1.0

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SPATA6	1418650_at 1418651_at 1438023_at 1445355_at	15	8.888	0.0523	Yes
2	SNX2	1460224_at	129	4.639	0.0747	Yes
3	NASP	1416042_s_at 1416043_at 1440328_at 1442728_at	140	4.533	0.1013	Yes
4	SMARCE1	1422675_at 1422676_at 1430822_at	234	3.630	0.1186	Yes
5	PSMC6	1417771_a_at	266	3.423	0.1376	Yes
6	SH3KBP1	1431592_a_at 1432269_a_at 1446562_at 1456261_at 1460337_at	326	3.189	0.1539	Yes
7	CGGBP1	1454641_at 1455658_at	339	3.154	0.1721	Yes
8	KLHL7	1428091_at 1452660_s_at	347	3.128	0.1904	Yes
9	NDRG1	1423413_at 1450976_at 1456174_x_at	388	3.044	0.2067	Yes
10	PEX14	1419053_at 1458153_at	562	2.680	0.2147	Yes
11	COPS5	1439243_x_at 1460171_at	648	2.489	0.2256	Yes
12	CHKA	1442277_at 1445795_at 1450264_a_at 1453582_at	719	2.358	0.2365	Yes
13	RBBP7	1415775_at 1456227_x_at	895	2.102	0.2410	Yes
14	RAP1GDS1	1425266_a_at 1459768_x_at	917	2.071	0.2523	Yes
15	ACE	1427034_at 1451911_a_at	1168	1.825	0.2517	Yes
16	KLF2	1448890_at	1214	1.792	0.2603	Yes
17	CDC37	1416819_at 1416820_at	1294	1.739	0.2670	Yes
18	BTBD14B	1420968_at 1420969_at 1433139_at 1433140_a_at 1443382_s_at 1458200_at	1312	1.730	0.2766	Yes
19	HAP1	1416997_a_at	1545	1.602	0.2755	Yes
20	CS	1422577_at 1422578_at 1450667_a_at	1547	1.601	0.2849	Yes
21	TCF4	1416723_at 1416724_x_at 1416725_at 1424089_a_at 1434148_at 1434149_at 1439336_at 1440106_at 1446386_at 1458201_at	1593	1.564	0.2922	Yes
22	ANKRD25	1425991_a_at 1460559_at	1691	1.514	0.2968	Yes
23	MRPL2	1448811_at	1780	1.463	0.3014	Yes
24	SLC35F5	1452059_at	1824	1.446	0.3081	Yes
25	PRR3	1424145_at	1962	1.371	0.3099	Yes
26	SNAPAP	1415756_a_at 1426578_s_at	2024	1.344	0.3151	Yes
27	UPF2	1435030_at 1445777_at	2310	1.220	0.3093	Yes
28	KCNB1	1423179_at 1423180_at	2402	1.190	0.3122	Yes
29	ING3	1422805_a_at 1422806_x_at 1450760_a_at 1460082_at	2464	1.166	0.3164	Yes
30	ME3	1429071_at	2559	1.139	0.3188	Yes
31	ROM1	1448996_at	2631	1.120	0.3222	Yes
32	KCNQ4	1435721_at 1442909_at	2642	1.117	0.3284	Yes
33	TAF11	1446161_at 1451995_at	2765	1.083	0.3293	Yes
34	MAP3K7	1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at	2799	1.073	0.3341	Yes
35	KLF13	1432543_a_at 1456030_at	2838	1.064	0.3387	Yes
36	GRIN2A	1421616_at	2982	1.028	0.3383	Yes
37	GRB2	1418508_a_at 1449111_a_at	3035	1.016	0.3420	Yes
38	PTPN2	1417140_a_at 1425197_at 1425198_at 1438562_a_at	3121	1.000	0.3440	Yes
39	CORO1C	1417752_at 1419911_at 1437721_at 1442972_at 1449660_s_at 1459169_at	3191	0.989	0.3467	Yes
40	HNRPDL	1420093_s_at 1420094_at 1424251_a_at 1424252_at 1428224_at 1428225_s_at 1449039_a_at 1456698_s_at	3571	0.907	0.3347	No
41	CDK5R1	1421123_at 1421124_at 1433450_at 1433451_at	3743	0.868	0.3320	No
42	CRY1	1433733_a_at	3830	0.852	0.3331	No
43	CACNA1D	1427974_s_at 1428051_a_at	3835	0.851	0.3380	No
44	FKBP14	1433481_at 1458225_at	4063	0.808	0.3324	No
45	LMO6	1439296_at	4092	0.802	0.3359	No
46	NCOA6	1423374_at	4498	0.728	0.3216	No
47	SENP1	1424330_at 1428925_at 1451319_at	4514	0.723	0.3252	No
48	VAMP2	1420833_at 1420834_at	4806	0.673	0.3159	No
49	FBXL11	1435329_at 1443336_at 1444358_at 1455942_at 1458449_at	5337	0.589	0.2950	No
50	SNAG1	1416359_at 1416360_at	5384	0.583	0.2964	No
51	BCL11B	1440137_at 1441762_at 1450339_a_at	5997	0.502	0.2712	No
52	LHX3	1421753_a_at 1425041_at	6142	0.484	0.2675	No
53	ELK1	1421896_at 1421897_at 1446390_at	6157	0.482	0.2697	No
54	GOLGA3	1419159_at 1419160_at 1449616_s_at	6162	0.482	0.2724	No
55	SMARCD1	1448913_at	6193	0.478	0.2739	No
56	SMCR7	1434072_at	6623	0.427	0.2567	No
57	PPP1R3D	1452922_at	6675	0.421	0.2569	No
58	CHD6	1427384_at 1431047_at	6676	0.421	0.2594	No
59	POU5F1	1417945_at	6802	0.408	0.2561	No
60	BCL6B	1418421_at	6883	0.400	0.2548	No
61	PHCA	1429520_a_at 1438435_at 1453179_at 1459771_x_at	6983	0.388	0.2525	No
62	KCNC3	1421980_at 1421981_at	7075	0.379	0.2506	No
63	POU3F2	1450831_at 1453478_at 1457734_at	7161	0.368	0.2489	No
64	PER1	1449851_at	7233	0.359	0.2478	No
65	IGSF4D	1435145_at 1435146_s_at 1435147_x_at 1436743_at 1440412_at 1444664_at 1459761_x_at	7340	0.349	0.2450	No
66	IGSF4	1417376_a_at 1417377_at 1417378_at 1431611_a_at	7883	0.297	0.2218	No
67	ABHD1	1418148_at	8000	0.287	0.2182	No
68	DRAP1	1451676_at	8006	0.287	0.2197	No
69	FNTA	1417465_at 1447904_s_at	8151	0.271	0.2147	No
70	HES7	1422950_at	8185	0.268	0.2148	No
71	TRIM28	1415869_a_at 1456308_x_at	8574	0.228	0.1983	No
72	ASCL2	1422396_s_at 1432018_at 1460514_s_at	8703	0.216	0.1937	No
73	PHF15	1430081_at 1455345_at	8828	0.205	0.1892	No
74	AP3M2	1417527_at 1432125_at 1447524_at 1448751_at	8982	0.191	0.1833	No
75	FEV	1425886_at	9053	0.186	0.1812	No
76	PTCH2	1422655_at	9103	0.181	0.1800	No
77	CACNA1A	1430408_at 1444455_at 1450510_a_at 1458312_at 1459996_at	9152	0.177	0.1789	No
78	HSPB9	1452842_at	9410	0.153	0.1680	No
79	TMEM24	1428095_a_at 1457585_at	9670	0.129	0.1568	No
80	SLC9A6	1435008_at 1435009_at	9705	0.127	0.1560	No
81	CAMK2G	1423941_at 1423942_a_at	9873	0.112	0.1490	No
82	RABEP2	1425602_a_at 1440795_x_at	9876	0.112	0.1496	No
83	CLDN11	1416003_at	9975	0.103	0.1457	No
84	GAS7	1417859_at 1431400_a_at 1445685_at	10088	0.095	0.1411	No
85	CDC25A	1417131_at 1417132_at 1445995_at	10110	0.093	0.1407	No
86	GGN	1445278_at	10234	0.083	0.1356	No
87	CHAT	1440070_at	10372	0.070	0.1297	No
88	CPD	1418018_at 1418019_at 1418020_s_at 1434547_at 1442212_at 1447392_s_at 1455009_at	10477	0.062	0.1253	No
89	JUB	1421344_a_at	11045	0.013	0.0993	No
90	HIPK1	1421298_a_at 1424540_at 1457515_at	11109	0.008	0.0964	No
91	NEF3	1422520_at	11154	0.003	0.0944	No
92	NXPH4	1429753_at	11269	-0.007	0.0892	No
93	SWAP70	1423543_at 1434225_at 1440809_at	11317	-0.012	0.0871	No
94	STMN1	1415849_s_at	11332	-0.013	0.0866	No
95	CYP26B1	1460011_at	11559	-0.034	0.0764	No
96	ACCN2	1455328_at	11625	-0.040	0.0736	No
97	TLX2	1421770_a_at	11956	-0.068	0.0589	No
98	HTR7	1422235_at	12295	-0.098	0.0439	No
99	VKORC1L1	1429092_at 1434916_at	12453	-0.113	0.0374	No
100	FBXO36	1419305_a_at 1449418_s_at	12543	-0.121	0.0340	No
101	SOX2	1416967_at	12687	-0.133	0.0282	No
102	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	12690	-0.134	0.0289	No
103	EDG8	1449365_at	12868	-0.151	0.0217	No
104	WNT2B	1421465_at	12875	-0.153	0.0223	No
105	CACNA1B	1425812_a_at 1436602_x_at 1439612_at 1460608_at	12991	-0.163	0.0180	No
106	PHOX2A	1418620_at	13051	-0.169	0.0163	No
107	NXPH3	1419710_at	13125	-0.175	0.0140	No
108	BHLHB3	1421099_at	13303	-0.190	0.0070	No
109	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	13387	-0.199	0.0044	No
110	LASP1	1438633_x_at 1438634_x_at 1439264_x_at 1444947_at 1448207_at 1455470_x_at 1456309_x_at 1456469_x_at 1456578_x_at 1460173_at	13452	-0.204	0.0026	No
111	FOXP4	1429719_at 1431088_at 1431437_at	13598	-0.216	-0.0027	No
112	PMM1	1424167_a_at 1430780_a_at	13707	-0.226	-0.0064	No
113	APLP2	1421887_a_at 1421888_x_at 1421889_a_at 1423739_x_at 1432344_a_at 1446786_at	13846	-0.240	-0.0113	No
114	RHOG	1422572_at	13872	-0.243	-0.0110	No
115	PPARGC1B	1438775_at 1449945_at 1457578_at	13907	-0.246	-0.0111	No
116	GLTP	1419027_s_at	14088	-0.265	-0.0178	No
117	HRH3	1445285_at 1448807_at	14096	-0.266	-0.0165	No
118	ANP32A	1421918_at 1434555_at 1450407_a_at	14144	-0.271	-0.0171	No
119	TEAD2	1448519_at	14309	-0.288	-0.0229	No
120	NFYC	1448963_at	14332	-0.290	-0.0222	No
121	OAZ2	1426763_at 1426764_at 1442541_at 1442735_at	14726	-0.332	-0.0382	No
122	WNT2	1449425_at	14798	-0.341	-0.0395	No
123	ERO1LB	1425705_a_at 1434714_at 1449948_at	14849	-0.346	-0.0397	No
124	BMPR2	1419616_at 1434310_at 1441652_at	14868	-0.348	-0.0385	No
125	ONECUT1	1421447_at 1450252_at 1456974_at	14870	-0.348	-0.0364	No
126	DDB1	1415735_at	15217	-0.387	-0.0500	No
127	PTK7	1452589_at	15435	-0.409	-0.0576	No
128	CREB1	1421582_a_at 1421583_at 1423402_at 1428755_at 1452529_a_at 1452901_at	15462	-0.414	-0.0563	No
129	LOXL4	1421153_at 1450134_at	15755	-0.449	-0.0671	No
130	GPR3	1460275_at	15766	-0.450	-0.0648	No
131	BAD	1416582_a_at 1416583_at	15828	-0.457	-0.0649	No
132	EPHA1	1422917_at 1432399_a_at 1432400_at	15936	-0.469	-0.0671	No
133	MYLIP	1424988_at	15981	-0.476	-0.0662	No
134	DHH	1422127_at 1434959_at	16038	-0.484	-0.0659	No
135	SH3BP5	1421922_at 1421923_at 1444346_at	16104	-0.493	-0.0660	No
136	SUPT6H	1417628_at 1430458_at	16116	-0.494	-0.0635	No
137	BCL7C	1440906_at 1443898_at 1446516_at 1447139_at 1449523_at	16139	-0.497	-0.0616	No
138	TIMP3	1419088_at 1419089_at 1449334_at 1449335_at	16183	-0.502	-0.0606	No
139	HYAL2	1448679_at	16536	-0.551	-0.0735	No
140	UGP2	1426460_a_at 1426461_at 1434485_a_at 1434486_x_at 1451742_a_at	16542	-0.552	-0.0704	No
141	TRPC4AP	1441184_at 1460720_at	16616	-0.563	-0.0704	No
142	TIMELESS	1417586_at 1417587_at	16899	-0.603	-0.0798	No
143	SLC18A3	1422203_at	17259	-0.663	-0.0923	No
144	GCN5L2	1422971_at 1422972_s_at 1426783_at	17269	-0.665	-0.0888	No
145	FGF12	1440270_at 1451693_a_at 1460137_at	17377	-0.682	-0.0896	No
146	RCOR2	1417302_at	17508	-0.704	-0.0914	No
147	OSBPL9	1423383_a_at 1438614_x_at 1439283_at 1445627_at 1450964_a_at	17731	-0.745	-0.0972	No
148	TEF	1424175_at 1438033_at 1450184_s_at	17819	-0.764	-0.0966	No
149	PIAS3	1421646_a_at 1451115_at	17873	-0.776	-0.0944	No
150	MXD4	1422574_at 1434378_a_at 1434379_at	17922	-0.785	-0.0920	No
151	CSNK1D	1415825_s_at 1418889_a_at 1437690_x_at 1444378_at 1449932_at 1456727_a_at	18044	-0.808	-0.0927	No
152	SLBP	1430058_at 1460168_at	18125	-0.829	-0.0915	No
153	ADCK1	1423762_at	18485	-0.916	-0.1025	No
154	SMARCA5	1440048_at	18572	-0.938	-0.1009	No
155	MAP4K2	1428297_at 1434833_at 1450244_a_at	18676	-0.960	-0.0999	No
156	NFAT5	1426029_a_at 1438999_a_at 1439328_at 1439805_at 1448966_a_at 1451921_a_at 1458213_at	18781	-0.980	-0.0988	No
157	SOX12	1439754_at 1455562_at 1456882_at	18878	-0.998	-0.0973	No
158	IQGAP1	1417379_at 1417380_at 1431395_a_at 1431396_at 1434998_at 1445724_at 1458124_at	18896	-1.001	-0.0921	No
159	DMTF1	1422636_at 1440349_at 1456697_x_at	19054	-1.026	-0.0932	No
160	KCNN2	1445676_at 1448927_at	19200	-1.052	-0.0936	No
161	WWP1	1427097_at 1427098_at 1446364_at 1446853_at 1452299_at	19302	-1.078	-0.0918	No
162	NTF5	1440353_at	19601	-1.165	-0.0986	No
163	RAB2B	1428115_a_at 1436923_at 1452667_at 1452668_x_at 1455857_a_at	19760	-1.217	-0.0986	No
164	MAP3K11	1450669_at	19847	-1.252	-0.0951	No
165	RELA	1419536_a_at	19848	-1.253	-0.0876	No
166	ROD1	1424083_at 1424084_at 1441407_at 1455819_at	19954	-1.290	-0.0848	No
167	DDAH2	1416457_at	20347	-1.486	-0.0939	No
168	CBLN1	1423286_at 1423287_at 1423288_s_at	20409	-1.516	-0.0877	No
169	PAK4	1428548_at	20577	-1.612	-0.0858	No
170	LDB1	1452024_a_at	20602	-1.630	-0.0772	No
171	SH2D3C	1415886_at	20617	-1.639	-0.0681	No
172	GNA11	1434254_at 1449144_at	20677	-1.675	-0.0608	No
173	DFNB31	1432555_at 1436485_s_at 1436486_x_at 1442507_at 1447438_at	20718	-1.706	-0.0525	No
174	ALS2	1417783_at 1417784_at 1431608_at 1446183_at	20791	-1.750	-0.0454	No
175	FKBP8	1416113_at	20923	-1.857	-0.0403	No
176	PLEKHB1	1416178_a_at 1434274_at 1434937_at 1442858_at 1445340_at 1447150_at 1454900_s_at 1456715_at 1457865_at 1458870_x_at	21009	-1.929	-0.0327	No
177	ATP2A2	1416551_at 1427250_at 1427251_at 1437797_at 1443551_at 1452363_a_at 1458927_at	21047	-1.952	-0.0228	No
178	PIAS1	1422581_at 1446448_at 1455486_at 1455611_at	21090	-1.980	-0.0129	No
179	PRKRA	1447737_at 1448923_at	21158	-2.034	-0.0039	No
180	ARHGEF1	1421164_a_at 1440403_at	21235	-2.094	0.0051	No
181	TAF6	1418593_at	21339	-2.227	0.0136	No
182	SIPA1	1416206_at	21392	-2.311	0.0250	No