Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
| Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
| Upregulated in class | SCID |
| GeneSet | TNFR1PATHWAY |
| Enrichment Score (ES) | -0.5844017 |
| Normalized Enrichment Score (NES) | -1.753886 |
| Nominal p-value | 0.006637168 |
| FDR q-value | 0.41636714 |
| FWER p-Value | 0.937 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | MAP2K4 | 1426233_at 1442679_at 1451982_at | 2090 | 1.312 | -0.0535 | No | ||
| 2 | PAK2 | 1434250_at 1454887_at | 2172 | 1.283 | -0.0162 | No | ||
| 3 | MAP3K7 | 1419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at | 2799 | 1.073 | -0.0105 | No | ||
| 4 | CRADD | 1427505_a_at 1443430_at | 3924 | 0.833 | -0.0352 | No | ||
| 5 | LMNA | 1421654_a_at 1425472_a_at 1426868_x_at 1452212_at 1457670_s_at | 3954 | 0.827 | -0.0101 | No | ||
| 6 | JUN | 1417409_at 1448694_at | 9216 | 0.171 | -0.2447 | No | ||
| 7 | RB1 | 1417850_at 1441494_at 1444400_at 1444454_at 1457447_at | 10060 | 0.097 | -0.2801 | No | ||
| 8 | BAG4 | 1418707_at 1439024_at 1449186_at | 11993 | -0.072 | -0.3660 | No | ||
| 9 | TNF | 1419607_at | 13820 | -0.238 | -0.4417 | No | ||
| 10 | PRKDC | 1451576_at | 14589 | -0.317 | -0.4667 | No | ||
| 11 | DFFB | 1421229_at 1437051_at | 15174 | -0.382 | -0.4811 | No | ||
| 12 | LMNB1 | 1423520_at 1423521_at | 15294 | -0.394 | -0.4740 | No | ||
| 13 | RIPK1 | 1419508_at 1439273_at 1449485_at | 15871 | -0.462 | -0.4855 | No | ||
| 14 | CASP8 | 1424552_at | 16947 | -0.612 | -0.5150 | No | ||
| 15 | LMNB2 | 1451849_a_at | 18468 | -0.911 | -0.5553 | Yes | ||
| 16 | FADD | 1416888_at 1446499_at | 19092 | -1.031 | -0.5508 | Yes | ||
| 17 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 19611 | -1.168 | -0.5371 | Yes | ||
| 18 | MAP3K1 | 1424850_at | 19820 | -1.242 | -0.5069 | Yes | ||
| 19 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 19993 | -1.310 | -0.4729 | Yes | ||
| 20 | ARHGDIB | 1426454_at | 20525 | -1.576 | -0.4468 | Yes | ||
| 21 | TRAF2 | 1451233_at | 20609 | -1.634 | -0.3984 | Yes | ||
| 22 | PAK1 | 1420979_at 1420980_at 1450070_s_at 1459029_at | 20746 | -1.720 | -0.3497 | Yes | ||
| 23 | DFFA | 1450885_at 1457564_at | 21032 | -1.942 | -0.3007 | Yes | ||
| 24 | CASP2 | 1448165_at | 21150 | -2.026 | -0.2413 | Yes | ||
| 25 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 21619 | -2.690 | -0.1767 | Yes | ||
| 26 | MADD | 1425735_at 1455502_at | 21698 | -2.944 | -0.0863 | Yes | ||
| 27 | TNFRSF1A | 1417291_at | 21718 | -3.039 | 0.0099 | Yes |
