DatasetSet_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls
#ATM_minus_versus_SCID
Phenotypephenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in classSCID
GeneSetAPOPTOSIS_KEGG
Enrichment Score (ES)-0.5797484
Normalized Enrichment Score (NES)-1.9592928
Nominal p-value0.0
FDR q-value0.14996038
FWER p-Value0.182
Table: GSEA Results Summary



Fig 1: Enrichment plot: APOPTOSIS_KEGG   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CYCS1422484_at 1445484_at5872.6310.0219No
2BAX1416837_at16211.5490.0034No
3SFRS2IP1434691_at 1443085_at 1452884_at 1452885_at 1460445_at29371.038-0.0374No
4LTA1420353_at29491.035-0.0188No
5NR3C11421866_at 1421867_at 1453860_s_at 1457635_s_at 1460303_at37310.871-0.0383No
6CRADD1427505_a_at 1443430_at39240.833-0.0316No
7NGFB1419675_at49360.651-0.0658No
8APAF11450223_at65390.437-0.1309No
9NFKBIA1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at66700.421-0.1290No
10CD401439221_s_at 1449473_s_at 1460415_a_at72890.355-0.1507No
11CASP41449591_at79910.288-0.1774No
12DAXX1419026_at80640.280-0.1755No
13CD40LG1422283_at90200.188-0.2156No
14BCL21422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at95910.137-0.2391No
15HRK1439854_at 1450366_at98170.117-0.2472No
16CASP11449265_at109000.028-0.2961No
17NGFR1421241_at 1450177_at 1454903_at110470.012-0.3026No
18BOK1417040_a_at12642-0.129-0.3730No
19TNF1419607_at13820-0.238-0.4224No
20NTRK11443990_at14398-0.296-0.4432No
21IKBKE1417813_at14500-0.307-0.4422No
22MCL11416880_at 1416881_at 1437527_x_at 1448503_at 1456243_x_at 1456381_x_at14568-0.313-0.4394No
23FASLG1418803_a_at 1449235_at14775-0.338-0.4426No
24FAS1460251_at15007-0.363-0.4464No
25PTPN131431791_a_at 1452127_a_at15027-0.365-0.4405No
26DFFB1421229_at 1437051_at15174-0.382-0.4401No
27TNFRSF1B1418099_at 1448951_at15672-0.439-0.4547No
28BAD1416582_a_at 1416583_at15828-0.457-0.4533No
29RIPK11419508_at 1439273_at 1449485_at15871-0.462-0.4467No
30TRAF11423602_at 1445452_at16705-0.577-0.4740No
31CASP81424552_at16947-0.612-0.4737No
32BCL2L11420887_a_at 1420888_at 1426050_at 1426191_a_at16991-0.619-0.4642No
33FADD1416888_at 1446499_at19092-1.031-0.5411No
34TRAF31418587_at 1444758_at 1449149_at19940-1.284-0.5560Yes
35CASP31426165_a_at 1430192_at 1449839_at19993-1.310-0.5341Yes
36TRAF21451233_at20609-1.634-0.5319Yes
37TRAF61421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at20741-1.716-0.5061Yes
38CASP61415995_at 1458715_at20811-1.766-0.4766Yes
39CASP91426125_a_at 1437537_at 1457816_at20906-1.849-0.4466Yes
40BCL2L21423572_at 1430453_a_at 1430454_x_at 1451029_at20916-1.855-0.4127Yes
41DFFA1450885_at 1457564_at21032-1.942-0.3820Yes
42CASP21448165_at21150-2.026-0.3498Yes
43NFKB11427705_a_at 1442949_at21385-2.296-0.3179Yes
44TRADD1429117_at 1439910_a_at 1452622_a_at21619-2.690-0.2787Yes
45TNFRSF1A1417291_at21718-3.039-0.2269Yes
46CASP71426062_a_at 1448659_at21858-4.665-0.1469Yes
47TFG1415887_at 1438053_at21931-8.1190.0002Yes
Table: GSEA details [plain text format]



Fig 2: APOPTOSIS_KEGG   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: APOPTOSIS_KEGG: Random ES distribution   
Gene set null distribution of ES for APOPTOSIS_KEGG