Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
| Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
| Upregulated in class | SCID |
| GeneSet | REACTOME_SMOOTH_MUSCLE_CONTRACTION |
| Enrichment Score (ES) | -0.65367687 |
| Normalized Enrichment Score (NES) | -1.6061785 |
| Nominal p-value | 0.03218884 |
| FDR q-value | 0.6708448 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | LMOD1 | 1427485_at | 5949 | 0.507 | -0.2274 | No | ||
| 2 | MYH11 | 1418122_at 1448962_at | 9704 | 0.127 | -0.3876 | No | ||
| 3 | MYL6 | 1435041_at | 9797 | 0.119 | -0.3815 | No | ||
| 4 | MYLK | 1425504_at 1425505_at 1425506_at | 9799 | 0.119 | -0.3713 | No | ||
| 5 | TPM1 | 1423049_a_at 1423721_at 1447713_at 1456623_at | 11638 | -0.041 | -0.4516 | No | ||
| 6 | ITGA1 | 1439713_at 1446569_at 1455251_at | 11691 | -0.046 | -0.4500 | No | ||
| 7 | CALD1 | 1424768_at 1424769_s_at 1424770_at 1433146_at 1433147_at 1458057_at | 13541 | -0.212 | -0.5159 | No | ||
| 8 | SORBS3 | 1419329_at | 14619 | -0.320 | -0.5373 | No | ||
| 9 | CALM1 | 1417365_a_at 1417366_s_at 1433592_at 1454611_a_at 1455571_x_at | 17172 | -0.650 | -0.5974 | Yes | ||
| 10 | ACTG2 | 1422340_a_at | 17985 | -0.797 | -0.5653 | Yes | ||
| 11 | ITGB5 | 1417533_a_at 1417534_at 1456133_x_at 1456195_x_at | 18895 | -1.000 | -0.5200 | Yes | ||
| 12 | PXN | 1424027_at 1426085_a_at 1456135_s_at | 21435 | -2.375 | -0.4299 | Yes | ||
| 13 | VCL | 1416156_at 1416157_at 1445256_at | 21875 | -5.223 | 0.0028 | Yes |
