Details for gene set REACTOME_FORMATION_AND_MATURATION_OF_MRNA

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID
Phenotype	phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID
Upregulated in class	ATM_minus
GeneSet	REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
Enrichment Score (ES)	0.4517522
Normalized Enrichment Score (NES)	1.684835
Nominal p-value	0.0016891892
FDR q-value	0.43104932
FWER p-Value	0.97

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CCAR1	1436156_at 1436157_at 1453319_at	49	7.222	0.0581	Yes
2	SMC1A	1417830_at 1417831_at 1417832_at	96	5.132	0.0988	Yes
3	GTF2E2	1448884_at	195	3.902	0.1269	Yes
4	POLR2B	1433552_a_at	272	3.375	0.1517	Yes
5	CSTF2	1419644_at 1419645_at 1455523_at	289	3.323	0.1787	Yes
6	NUDT21	1417681_at 1428339_at 1437213_at 1455966_s_at	361	3.083	0.2012	Yes
7	RNGTT	1425844_a_at 1448714_at	423	2.974	0.2232	Yes
8	SF3A3	1423811_at	594	2.610	0.2372	Yes
9	CCNH	1418585_at	829	2.208	0.2450	Yes
10	DHX9	1425617_at 1425618_at 1451770_s_at	916	2.072	0.2583	Yes
11	SFRS6	1416720_at 1416721_s_at 1447898_s_at 1448454_at	990	1.984	0.2716	Yes
12	SNRPA1	1417351_a_at 1417352_s_at 1417353_x_at	1037	1.942	0.2857	Yes
13	THOC4	1417724_at 1436211_at	1047	1.933	0.3014	Yes
14	SFRS2	1415807_s_at 1427504_s_at 1427816_at 1452439_s_at	1230	1.777	0.3079	Yes
15	POLR2I	1428494_a_at	1269	1.751	0.3208	Yes
16	TAF5	1435474_at	1291	1.741	0.3344	Yes
17	PHF5A	1424170_at	1625	1.545	0.3320	Yes
18	SF3A2	1450576_a_at 1455546_s_at	1672	1.526	0.3427	Yes
19	MNAT1	1432177_a_at	1885	1.414	0.3448	Yes
20	RDBP	1450705_at	1918	1.397	0.3550	Yes
21	METTL3	1423099_a_at	2032	1.341	0.3610	Yes
22	GTF2F1	1417698_at 1417699_at	2047	1.333	0.3715	Yes
23	GTF2H2	1450701_a_at 1457818_at	2119	1.302	0.3791	Yes
24	SNRPD3	1422884_at 1422885_at 1449629_s_at	2144	1.292	0.3888	Yes
25	GTF2A1	1421357_at	2158	1.287	0.3990	Yes
26	MAGOH	1416212_at	2254	1.242	0.4050	Yes
27	SFRS11	1427269_at 1430077_at 1439095_at 1452371_at	2384	1.197	0.4091	Yes
28	POLR2D	1424258_at	2408	1.187	0.4179	Yes
29	TAF9	1422778_at 1451509_at	2462	1.167	0.4253	Yes
30	SNRPB2	1426613_a_at 1452422_a_at	2492	1.158	0.4336	Yes
31	TAF10	1448784_at	2626	1.121	0.4369	Yes
32	TAF11	1446161_at 1451995_at	2765	1.083	0.4396	Yes
33	U2AF1	1422509_at	3069	1.010	0.4342	Yes
34	SRRM1	1420934_a_at 1420935_a_at 1442330_at 1447447_s_at 1450045_at 1454689_at 1459828_at	3295	0.966	0.4319	Yes
35	TAF12	1423398_at	3310	0.963	0.4393	Yes
36	NFX1	1419752_at 1419753_at 1428248_at 1442397_at	3364	0.951	0.4448	Yes
37	PABPN1	1415728_at 1422848_a_at 1422849_a_at 1422850_at	3492	0.924	0.4467	Yes
38	SFRS9	1417727_at	3882	0.842	0.4359	Yes
39	TCEB3	1422591_at 1434117_at 1450676_at	3922	0.834	0.4411	Yes
40	PCBP2	1421743_a_at 1435881_at	4061	0.808	0.4415	Yes
41	TAF13	1448707_at	4066	0.808	0.4481	Yes
42	PRPF4	1429724_at 1438481_at	4132	0.794	0.4518	Yes
43	GTF2F2	1426626_at 1443233_at	4284	0.767	0.4512	No
44	PTBP1	1424874_a_at 1450443_at 1458284_at	4773	0.679	0.4346	No
45	NCBP2	1423045_at 1423046_s_at 1450847_at	4790	0.676	0.4395	No
46	GTF2E1	1428124_at 1443110_at	5666	0.544	0.4039	No
47	SF3B1	1418561_at 1418562_at 1440818_s_at 1449138_at	6715	0.418	0.3594	No
48	TCEB1	1427914_a_at 1427915_s_at 1436226_at 1452593_a_at	6752	0.414	0.3612	No
49	POLR2F	1415754_at 1427402_at	6862	0.402	0.3596	No
50	CDK7	1424257_at 1439511_at 1451741_a_at 1458987_at	7205	0.362	0.3469	No
51	POLR2H	1424473_at	7291	0.354	0.3460	No
52	PCBP1	1448642_at	7692	0.315	0.3303	No
53	ELL	1441928_x_at 1460643_at	7782	0.306	0.3288	No
54	SF3A1	1419087_s_at 1445719_at 1446687_at 1449333_at	7965	0.290	0.3229	No
55	CD2BP2	1417223_at 1417224_a_at 1448624_at	8011	0.286	0.3232	No
56	SF3B2	1429362_a_at 1433461_at 1438637_x_at 1453123_at 1456040_at 1456352_a_at 1459836_x_at	8287	0.257	0.3128	No
57	EFTUD2	1416557_a_at 1438835_a_at 1438836_at 1456107_x_at	8890	0.200	0.2869	No
58	GTF2A2	1433528_at	8934	0.195	0.2865	No
59	TXNL4A	1419179_at	8958	0.193	0.2871	No
60	GTF2H1	1453169_a_at	9163	0.176	0.2792	No
61	TCEB2	1428263_a_at	10344	0.073	0.2258	No
62	PCF11	1427159_at 1427160_at 1428724_at 1456489_at	11052	0.012	0.1935	No
63	CSTF3	1424723_s_at 1443909_at	11465	-0.025	0.1748	No
64	NHP2L1	1416973_at	11664	-0.044	0.1661	No
65	RNMT	1436328_at 1440002_at 1446442_at 1453106_a_at	11665	-0.044	0.1665	No
66	TAF1	1447417_at 1455513_at 1458744_at	12022	-0.074	0.1508	No
67	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	12329	-0.101	0.1376	No
68	RBM5	1438069_a_at 1441319_at 1444618_at 1444971_at 1452186_at 1452187_at 1456262_at	12628	-0.128	0.1250	No
69	POLR2E	1417138_s_at 1451093_at 1458326_at	12659	-0.131	0.1247	No
70	FUS	1451285_at 1451286_s_at 1455831_at 1458801_at	12690	-0.134	0.1245	No
71	GTF2B	1438066_at 1451135_at	12992	-0.163	0.1121	No
72	U2AF2	1417260_at	13184	-0.180	0.1048	No
73	SF4	1424381_at 1444699_at	13312	-0.191	0.1006	No
74	CPSF1	1417665_a_at	13443	-0.203	0.0963	No
75	POLR2G	1416270_at	13673	-0.223	0.0877	No
76	SNRPE	1451294_s_at	14431	-0.299	0.0555	No
77	GTF2H3	1454092_a_at	14466	-0.303	0.0565	No
78	SNRPF	1428672_at	14478	-0.305	0.0585	No
79	CCNT2	1427088_at 1427089_at 1435445_at 1452297_at 1453399_at 1457439_at	14874	-0.348	0.0433	No
80	POLR2C	1416341_at	15287	-0.393	0.0278	No
81	PRPF8	1422453_at	15399	-0.406	0.0261	No
82	SNRPA	1417274_at	15500	-0.417	0.0250	No
83	CDC40	1442667_at 1445348_at 1453342_at 1457366_at	15645	-0.436	0.0220	No
84	SSRP1	1426788_a_at 1426789_s_at 1426790_at	16776	-0.586	-0.0249	No
85	TBP	1426469_a_at 1426470_at	17082	-0.633	-0.0335	No
86	TH1L	1416198_at	17571	-0.716	-0.0499	No
87	POLR2L	1428296_at	17711	-0.740	-0.0501	No
88	CCNT1	1419313_at 1456477_at	18208	-0.852	-0.0657	No
89	ERCC3	1448497_at	18568	-0.937	-0.0743	No
90	SFRS7	1424033_at 1424883_s_at 1436871_at	18695	-0.964	-0.0721	No
91	PRPF6	1424036_at 1426026_at 1454789_x_at	18836	-0.989	-0.0702	No
92	CSTF1	1417117_at 1448597_at	18947	-1.008	-0.0668	No
93	YBX1	1418624_at 1430720_at 1438064_at	18974	-1.012	-0.0596	No
94	SFRS4	1448778_at	18986	-1.014	-0.0516	No
95	RNPS1	1437027_x_at 1437359_at 1437851_x_at 1438267_x_at 1448324_at	19075	-1.028	-0.0470	No
96	ERCC2	1460727_at	19582	-1.158	-0.0605	No
97	SNRPB	1419260_a_at 1437193_s_at	19808	-1.239	-0.0605	No
98	TAF4	1427460_at 1452438_s_at	20254	-1.435	-0.0689	No
99	SNRPD2	1452680_at	20486	-1.550	-0.0665	No
100	POLR2A	1422311_a_at 1426242_at 1458710_at	20505	-1.561	-0.0543	No
101	RBMX	1416177_at 1416354_at 1416355_at 1426863_at 1437847_x_at	20699	-1.696	-0.0490	No
102	SF3B3	1415985_at 1430075_at	21067	-1.964	-0.0494	No
103	POLR2J	1417720_at 1440065_at	21085	-1.978	-0.0337	No
104	CDK9	1417269_at 1457240_at	21134	-2.017	-0.0190	No
105	SFRS1	1428099_a_at 1428100_at 1430982_at 1434972_x_at 1452430_s_at 1453722_s_at 1457136_at	21222	-2.084	-0.0056	No
106	TAF6	1418593_at	21339	-2.227	0.0077	No
107	PAPOLA	1424216_a_at 1424217_at 1427544_a_at 1444015_at 1455836_at	21416	-2.348	0.0238	No