Details for gene set REGULATION_OF_SIGNAL

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	REGULATION_OF_SIGNAL_TRANSDUCTION
Enrichment Score (ES)	-0.4071193
Normalized Enrichment Score (NES)	-1.6578108
Nominal p-value	0.0
FDR q-value	0.33951467
FWER p-Value	0.996

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HMOX1	1448239_at	577	4.122	-0.0130	No
2	ECM1	1448613_at	641	3.929	-0.0030	No
3	BST2	1424921_at	667	3.863	0.0085	No
4	ECT2	1419513_a_at	839	3.479	0.0121	No
5	SLC35B2	1423927_at 1429007_at	1003	3.164	0.0149	No
6	GPR89A	1424696_at	1034	3.120	0.0238	No
7	SOST	1421245_at 1436240_at 1450179_at	1101	3.025	0.0307	No
8	ATP2C1	1431196_at 1434386_at 1437738_at 1439215_at 1442742_at	1119	3.002	0.0397	No
9	GNG7	1455190_at	1312	2.781	0.0400	No
10	EEF1E1	1444757_at 1449044_at	1432	2.660	0.0433	No
11	FGD3	1433398_at 1450235_at 1454593_at	1460	2.635	0.0507	No
12	MALT1	1445068_at 1456126_at 1456429_at	1490	2.604	0.0579	No
13	MAPK8IP3	1416437_a_at 1425975_a_at 1436676_at 1460628_at	1626	2.452	0.0597	No
14	LGALS1	1419573_a_at 1455439_a_at	1675	2.410	0.0654	No
15	LGALS9	1421217_a_at	1683	2.400	0.0730	No
16	NCK2	1416796_at 1416797_at 1458432_at	1962	2.174	0.0673	No
17	TNFRSF10B	1421296_at 1422344_s_at	2095	2.079	0.0681	No
18	PLK2	1427005_at	2168	2.024	0.0714	No
19	GRK6	1437436_s_at 1450480_a_at 1451672_at	2235	1.990	0.0749	No
20	RHOC	1435394_s_at 1448605_at	2506	1.832	0.0685	No
21	RIPK1	1419508_at 1439273_at 1449485_at	2512	1.830	0.0743	No
22	EEF1D	1428135_a_at 1439439_x_at 1449506_a_at 1459754_x_at	2774	1.727	0.0679	No
23	LTBR	1416435_at	2843	1.701	0.0704	No
24	ACVR1	1416786_at 1416787_at 1448460_at 1457551_at	2876	1.690	0.0745	No
25	GRK1	1421361_at	3205	1.565	0.0645	No
26	CDH13	1423551_at 1431824_at 1454015_a_at 1459535_at	3233	1.557	0.0684	No
27	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	3299	1.540	0.0704	No
28	IL31RA	1445095_at 1451535_at	3564	1.455	0.0631	No
29	TPD52L1	1418412_at	3596	1.447	0.0664	No
30	OTUD7B	1428953_at 1429139_at 1435552_at 1457716_at	3890	1.360	0.0574	No
31	TLR6	1421352_at	3908	1.355	0.0610	No
32	CDKN1C	1417649_at	4141	1.299	0.0546	No
33	PPP5C	1424115_at 1424116_x_at 1451242_a_at	4331	1.262	0.0501	No
34	TAOK2	1438208_at 1443642_at 1456826_at	4499	1.232	0.0464	No
35	ADRB3	1421555_at 1455918_at	4623	1.208	0.0447	No
36	GLI1	1449058_at	4757	1.180	0.0425	No
37	FGD1	1416865_at 1437369_at 1459278_at	4764	1.179	0.0461	No
38	LITAF	1416303_at 1416304_at	4846	1.164	0.0462	No
39	SQSTM1	1440076_at 1442237_at 1444021_at 1450957_a_at	4868	1.159	0.0490	No
40	IL20	1421608_at	4934	1.147	0.0498	No
41	PTPRC	1422124_a_at 1440165_at	4964	1.140	0.0522	No
42	PEG10	1427550_at	4993	1.133	0.0546	No
43	CFLAR	1424996_at 1425686_at 1425687_at 1439600_at 1449317_at	5011	1.129	0.0575	No
44	INHBA	1422053_at 1458291_at	5388	1.066	0.0438	No
45	CIDEA	1417956_at	5398	1.064	0.0468	No
46	IL12A	1425454_a_at	5641	1.030	0.0391	No
47	TNFSF10	1420412_at 1439680_at 1459913_at	5700	1.023	0.0398	No
48	DTX1	1425822_a_at 1458643_at	5799	1.010	0.0386	No
49	PPM1A	1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at	5823	1.006	0.0408	No
50	GRM4	1457299_at	6021	0.984	0.0350	No
51	GJA1	1415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at	6078	0.976	0.0356	No
52	MFN2	1441424_at 1448131_at 1451900_at	6160	0.963	0.0350	No
53	RGS3	1425701_a_at 1427648_at 1449516_a_at 1454026_a_at	6188	0.959	0.0369	No
54	NF2	1421820_a_at 1427708_a_at 1450382_at 1451829_a_at	6232	0.952	0.0381	No
55	VAPA	1416465_a_at 1416466_at 1448349_at	6576	0.901	0.0253	No
56	RGS9	1418691_at 1426033_at 1439635_at	6796	0.871	0.0181	No
57	TRIM13	1417888_at	7021	0.837	0.0105	No
58	RGS5	1420940_x_at 1420941_at	7167	0.818	0.0065	No
59	CBLC	1422666_at 1431692_a_at	7289	0.801	0.0036	No
60	RGS20	1421493_a_at 1443694_at 1446199_at	7774	0.740	-0.0163	No
61	FGD2	1419515_at	7923	0.721	-0.0207	No
62	TSC1	1422043_at 1439989_at 1455252_at	8044	0.703	-0.0239	No
63	RAC1	1423734_at 1437674_at 1451086_s_at	8062	0.701	-0.0224	No
64	FGD6	1419322_at 1435467_at	8115	0.693	-0.0225	No
65	NFAM1	1425714_a_at 1428790_at	8202	0.682	-0.0242	No
66	SMAD3	1450471_at 1450472_s_at 1454960_at	8283	0.672	-0.0257	No
67	EDG2	1417143_at 1426110_a_at 1448606_at	8402	0.657	-0.0290	No
68	RGS16	1426037_a_at 1451452_a_at 1455265_a_at	8628	0.629	-0.0373	No
69	FRZB	1416658_at 1448424_at	8676	0.623	-0.0374	No
70	GRK4	1420355_at 1454152_a_at	9048	0.580	-0.0525	No
71	EREG	1419431_at	9152	0.568	-0.0554	No
72	CASP8	1424552_at	9464	0.532	-0.0680	No
73	CASP1	1449265_at	9683	0.506	-0.0763	No
74	RGS4	1416286_at 1416287_at 1448285_at	9994	0.471	-0.0890	No
75	PTEN	1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at	10105	0.457	-0.0926	No
76	GOLT1B	1449859_at 1460583_at	10244	0.444	-0.0975	No
77	MAPK8IP2	1418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at	10262	0.442	-0.0968	No
78	FGD5	1460578_at	10370	0.431	-0.1003	No
79	GIT2	1423391_at 1432160_at 1435925_at	10456	0.422	-0.1029	No
80	RIC8B	1435096_at 1439724_at	10580	0.411	-0.1072	No
81	PLEKHG5	1452248_at	10696	0.397	-0.1112	No
82	AMBP	1416649_at	10703	0.396	-0.1101	No
83	ACVR2B	1419140_at 1439856_at	10814	0.381	-0.1139	No
84	TDGF1	1450989_at	11059	0.355	-0.1240	No
85	EDA2R	1440085_at	11239	0.335	-0.1311	No
86	RIPK2	1421236_at 1450173_at	11319	0.326	-0.1337	No
87	NEK6	1451043_at	11323	0.325	-0.1328	No
88	EGF	1418093_a_at	11531	0.301	-0.1413	No
89	MDFI	1420713_a_at 1425924_at	11931	0.258	-0.1588	No
90	ABRA	1458455_at	12103	0.241	-0.1659	No
91	TMED4	1448422_at 1448423_at	12172	0.234	-0.1682	No
92	BRAP	1416738_at 1416739_a_at	12595	0.189	-0.1870	No
93	TSPAN6	1416872_at 1448501_at	12855	0.159	-0.1984	No
94	ACVR1B	1422098_at 1433725_at	12901	0.152	-0.2000	No
95	HTR2B	1422125_at	12914	0.151	-0.2000	No
96	OTX2	1425926_a_at	12931	0.150	-0.2003	No
97	MYD88	1419272_at	12976	0.145	-0.2018	No
98	NOTCH2	1451889_at 1455556_at	12978	0.145	-0.2014	No
99	GNG4	1417943_at 1417944_at 1447669_s_at	13231	0.115	-0.2126	No
100	NF1	1438067_at 1441523_at 1443097_at 1452525_a_at	13423	0.091	-0.2211	No
101	CITED2	1417129_a_at 1421267_a_at 1439915_at 1440091_at 1443561_at 1443926_at 1445638_at 1446176_at 1447861_x_at 1457632_s_at 1459301_at	13510	0.080	-0.2248	No
102	CXXC5	1431469_a_at 1448960_at	13566	0.073	-0.2271	No
103	MAP3K3	1426686_s_at 1426687_at 1436522_at	13720	0.051	-0.2340	No
104	NLK	1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at	13996	0.016	-0.2466	No
105	RGN	1448852_at	14013	0.013	-0.2473	No
106	TRAF7	1424320_a_at	14094	0.003	-0.2509	No
107	FGD4	1425037_at 1426041_a_at 1426042_at 1451659_at 1455337_at	14229	-0.018	-0.2570	No
108	GRK5	1446361_at 1446998_at 1449514_at	14266	-0.024	-0.2586	No
109	HIPK2	1424863_a_at 1424864_at 1425983_x_at 1428433_at 1429566_a_at 1432523_at 1446167_at 1448631_a_at 1456022_at 1458520_at	14284	-0.026	-0.2593	No
110	TRAF6	1421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at	14353	-0.036	-0.2623	No
111	SECTM1	1419478_at 1419479_at	14553	-0.068	-0.2712	No
112	GIT1	1454759_at	14646	-0.082	-0.2752	No
113	CD24	1416034_at 1437502_x_at 1448182_a_at	14737	-0.094	-0.2790	No
114	PLCE1	1452398_at	14752	-0.097	-0.2794	No
115	SHC1	1422853_at 1422854_at	14924	-0.125	-0.2868	No
116	CDC42BPB	1434652_at 1459167_at	14963	-0.132	-0.2881	No
117	CD40	1439221_s_at 1449473_s_at 1460415_a_at	14984	-0.135	-0.2886	No
118	RGS12	1429380_at 1453129_a_at 1457511_at 1459566_at	15167	-0.164	-0.2964	No
119	RGS11	1425245_a_at	15685	-0.256	-0.3194	No
120	SNX6	1425148_a_at 1429497_s_at 1447234_s_at 1451602_at	15843	-0.290	-0.3256	No
121	FKBP1A	1416036_at 1438795_x_at 1438958_x_at 1448184_at 1456196_x_at	16008	-0.325	-0.3321	No
122	SMAD2	1420634_a_at 1458304_at	16177	-0.365	-0.3386	No
123	NDFIP1	1424820_a_at 1424821_at 1451493_at	16227	-0.376	-0.3397	No
124	TRADD	1429117_at 1439910_a_at 1452622_a_at	16354	-0.409	-0.3441	No
125	RPL17	1423855_x_at 1435791_x_at 1453752_at	16511	-0.446	-0.3498	No
126	MIB2	1424862_s_at	16619	-0.477	-0.3532	No
127	REL	1420710_at	16635	-0.480	-0.3523	No
128	CDKN2B	1449152_at	16689	-0.493	-0.3531	No
129	ALS2	1417783_at 1417784_at 1431608_at 1446183_at	16719	-0.503	-0.3528	No
130	FASLG	1418803_a_at 1449235_at	17094	-0.623	-0.3680	No
131	ZIC1	1423477_at 1439627_at	17161	-0.650	-0.3689	No
132	HGS	1416540_at	17170	-0.652	-0.3671	No
133	DMPK	1422989_a_at 1434944_at	17219	-0.669	-0.3671	No
134	RHOA	1437628_s_at	17319	-0.701	-0.3694	No
135	ENG	1417271_a_at 1432176_a_at	17411	-0.740	-0.3711	No
136	CLCF1	1437270_a_at 1437271_at 1450262_at	17521	-0.786	-0.3736	No
137	TMEM101	1451315_at	17536	-0.791	-0.3716	No
138	SLC44A2	1428065_at 1438559_x_at 1438860_a_at	17698	-0.856	-0.3762	No
139	TRAT1	1427532_at 1437561_at	17860	-0.932	-0.3805	No
140	ACVR2A	1437382_at 1439643_at 1445026_at 1451004_at	17956	-0.966	-0.3817	No
141	ADRB2	1437302_at	18015	-0.987	-0.3812	No
142	RASGRP4	1425380_at	18255	-1.061	-0.3887	No
143	UBE2N	1422559_at 1435384_at	18407	-1.125	-0.3919	No
144	F2R	1437308_s_at 1450852_s_at	18446	-1.142	-0.3899	No
145	ZDHHC13	1428307_at 1460048_at	18533	-1.184	-0.3900	No
146	TRAF3IP2	1445985_at 1448508_at	18906	-1.378	-0.4026	Yes
147	SIGIRR	1449163_at	18976	-1.421	-0.4011	Yes
148	TGFA	1421942_s_at 1450421_at	19000	-1.433	-0.3975	Yes
149	CDC42BPG	1436197_at	19033	-1.451	-0.3942	Yes
150	FADD	1416888_at 1446499_at	19039	-1.457	-0.3896	Yes
151	TICAM1	1454676_s_at	19114	-1.509	-0.3881	Yes
152	ATP6AP2	1423662_at 1437688_x_at 1439456_x_at	19137	-1.524	-0.3841	Yes
153	MAPK8IP1	1425679_a_at 1440619_at	19157	-1.537	-0.3799	Yes
154	RGS2	1419247_at 1419248_at 1447830_s_at	19262	-1.604	-0.3794	Yes
155	HCLS1	1418842_at	19361	-1.671	-0.3785	Yes
156	TBK1	1422469_at 1445571_at 1460315_s_at	19445	-1.737	-0.3766	Yes
157	TAOK3	1435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at	19478	-1.757	-0.3723	Yes
158	THY1	1423135_at	19485	-1.763	-0.3668	Yes
159	MIER1	1433755_at 1443400_at 1443879_at 1453760_at	19700	-1.952	-0.3702	Yes
160	TFG	1415887_at 1438053_at	19754	-1.997	-0.3661	Yes
161	BCL10	1418970_a_at 1418971_x_at 1418972_at 1443524_x_at	19756	-1.997	-0.3596	Yes
162	CDC42BPA	1435847_at 1436380_at 1438449_at 1442260_at 1446945_at	19778	-2.005	-0.3540	Yes
163	ARF6	1418822_a_at 1418823_at 1418824_at	19821	-2.038	-0.3492	Yes
164	CENTD2	1428064_at	19949	-2.125	-0.3481	Yes
165	GPR177	1423824_at 1423825_at 1437434_a_at 1458319_at	20199	-2.363	-0.3518	Yes
166	NUP62	1415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at	20265	-2.430	-0.3468	Yes
167	TMEM9B	1417874_at 1448867_at	20296	-2.471	-0.3401	Yes
168	SLA2	1437504_at 1451492_at	20471	-2.687	-0.3393	Yes
169	SNF1LK2	1444472_at 1457276_at	20473	-2.692	-0.3305	Yes
170	RALBP1	1417248_at 1448634_at	20537	-2.785	-0.3243	Yes
171	CANT1	1421476_a_at 1433709_at 1451688_s_at	20628	-2.916	-0.3188	Yes
172	MDFIC	1427040_at	20673	-2.979	-0.3111	Yes
173	RELA	1419536_a_at	20799	-3.184	-0.3064	Yes
174	ARHGAP27	1416758_at 1457655_x_at	20829	-3.249	-0.2971	Yes
175	CC2D1A	1426422_at	20862	-3.316	-0.2877	Yes
176	SMURF1	1443393_at	20877	-3.342	-0.2773	Yes
177	MAP3K7IP2	1423462_at 1451003_at	20887	-3.362	-0.2667	Yes
178	BIRC2	1418854_at	21087	-3.757	-0.2636	Yes
179	TAX1BP3	1424169_at	21137	-3.874	-0.2531	Yes
180	TNFAIP3	1433699_at 1450829_at	21180	-3.976	-0.2420	Yes
181	NDFIP2	1452066_a_at	21240	-4.142	-0.2311	Yes
182	FLNA	1426677_at	21289	-4.293	-0.2192	Yes
183	SCOTIN	1423986_a_at 1437503_a_at	21312	-4.389	-0.2059	Yes
184	SMAD4	1422485_at 1422486_a_at 1422487_at 1444205_at	21315	-4.417	-0.1915	Yes
185	IKBKE	1417813_at	21455	-4.927	-0.1817	Yes
186	RGS14	1419221_a_at	21548	-5.415	-0.1681	Yes
187	TNFRSF1A	1417291_at	21597	-5.736	-0.1515	Yes
188	SOCS1	1440047_at 1450446_a_at	21625	-5.963	-0.1332	Yes
189	TGFB1	1420653_at 1445360_at	21657	-6.176	-0.1144	Yes
190	SLC20A1	1438824_at 1446441_at 1448568_a_at	21735	-6.812	-0.0956	Yes
191	CENTD3	1419833_s_at 1447407_at 1451282_at	21766	-7.157	-0.0735	Yes
192	ZDHHC17	1434397_at 1447656_at 1455986_at 1458084_at 1458363_at	21871	-7.861	-0.0525	Yes
193	RHOH	1429319_at 1441385_at 1443015_at	21921	-8.394	-0.0272	Yes
194	RAMP1	1417481_at 1447474_at	21927	-8.485	0.0004	Yes