Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos |
| Phenotype | phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos |
| Upregulated in class | ATM_plus |
| GeneSet | REGULATION_OF_GROWTH |
| Enrichment Score (ES) | -0.5543742 |
| Normalized Enrichment Score (NES) | -1.8279254 |
| Nominal p-value | 0.002105263 |
| FDR q-value | 0.26566494 |
| FWER p-Value | 0.586 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | SOD1 | 1435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at | 1157 | 2.952 | -0.0254 | No | ||
| 2 | CDKN1A | 1421679_a_at 1424638_at | 1430 | 2.662 | -0.0130 | No | ||
| 3 | CDKN2A | 1450140_a_at | 1811 | 2.297 | -0.0089 | No | ||
| 4 | NDUFS3 | 1423737_at | 2267 | 1.973 | -0.0113 | No | ||
| 5 | SPHK1 | 1451596_a_at | 2307 | 1.948 | 0.0050 | No | ||
| 6 | CDA | 1427357_at | 2417 | 1.876 | 0.0175 | No | ||
| 7 | TGFB2 | 1423250_a_at 1438303_at 1446141_at 1450922_a_at 1450923_at | 2731 | 1.738 | 0.0194 | No | ||
| 8 | APBB2 | 1426719_at 1426720_at 1440135_at 1446481_at 1452342_at | 2933 | 1.669 | 0.0258 | No | ||
| 9 | ENO1 | 1419023_x_at | 3045 | 1.627 | 0.0359 | No | ||
| 10 | TP53 | 1426538_a_at 1427739_a_at 1438808_at 1457623_x_at 1459780_at 1459781_x_at | 3061 | 1.619 | 0.0503 | No | ||
| 11 | BMP10 | 1421763_at | 4520 | 1.228 | -0.0049 | No | ||
| 12 | ALOX12 | 1422699_at 1422700_at | 4785 | 1.174 | -0.0060 | No | ||
| 13 | BNIPL | 1420683_at | 5259 | 1.089 | -0.0174 | No | ||
| 14 | INHBA | 1422053_at 1458291_at | 5388 | 1.066 | -0.0134 | No | ||
| 15 | APBB1 | 1423892_at 1423893_x_at | 7294 | 0.800 | -0.0929 | No | ||
| 16 | GHRH | 1419634_a_at | 7452 | 0.781 | -0.0928 | No | ||
| 17 | SMAD3 | 1450471_at 1450472_s_at 1454960_at | 8283 | 0.672 | -0.1245 | No | ||
| 18 | COL4A4 | 1425772_at 1440250_at 1445328_at | 9044 | 0.580 | -0.1538 | No | ||
| 19 | DLC1 | 1436173_at 1450206_at 1458220_at 1460602_at | 10332 | 0.436 | -0.2085 | No | ||
| 20 | TSPYL2 | 1434849_at | 10757 | 0.389 | -0.2243 | No | ||
| 21 | RERG | 1447446_at 1451236_at | 11868 | 0.264 | -0.2725 | No | ||
| 22 | PPP1R9B | 1447247_at 1447486_at | 12746 | 0.170 | -0.3110 | No | ||
| 23 | ACVR1B | 1422098_at 1433725_at | 12901 | 0.152 | -0.3167 | No | ||
| 24 | SERTAD2 | 1417209_at 1444645_at 1454815_at | 13042 | 0.136 | -0.3218 | No | ||
| 25 | GHSR | 1446756_at | 13912 | 0.026 | -0.3613 | No | ||
| 26 | CDC2L1 | 1418841_s_at | 14076 | 0.006 | -0.3686 | No | ||
| 27 | DERL2 | 1435101_at 1448438_at | 14095 | 0.002 | -0.3694 | No | ||
| 28 | BCAR1 | 1439388_s_at 1450622_at | 14615 | -0.077 | -0.3924 | No | ||
| 29 | PLCE1 | 1452398_at | 14752 | -0.097 | -0.3978 | No | ||
| 30 | PRSS2 | 1417682_a_at 1433459_x_at 1433573_x_at 1435507_x_at | 16928 | -0.569 | -0.4918 | No | ||
| 31 | ING4 | 1448054_at 1460728_s_at | 16979 | -0.588 | -0.4886 | No | ||
| 32 | IHPK2 | 1428373_at 1435319_at | 18009 | -0.985 | -0.5265 | No | ||
| 33 | NOL8 | 1428950_s_at 1428951_at 1452974_at | 18097 | -1.010 | -0.5210 | No | ||
| 34 | RB1 | 1417850_at 1441494_at 1444400_at 1444454_at 1457447_at | 18569 | -1.202 | -0.5313 | No | ||
| 35 | NDUFA13 | 1430713_s_at | 18872 | -1.359 | -0.5325 | No | ||
| 36 | ING5 | 1431134_at 1436069_at 1442094_at 1454235_a_at | 19316 | -1.640 | -0.5374 | Yes | ||
| 37 | FAM107A | 1442951_at 1445064_at | 19385 | -1.693 | -0.5248 | Yes | ||
| 38 | PTCH1 | 1428853_at 1439663_at 1447039_at 1450824_at | 19675 | -1.934 | -0.5199 | Yes | ||
| 39 | DCBLD2 | 1420526_at 1437635_at 1449891_a_at | 20256 | -2.423 | -0.5239 | Yes | ||
| 40 | PML | 1448757_at 1456103_at 1459137_at | 20925 | -3.435 | -0.5224 | Yes | ||
| 41 | BBC3 | 1423315_at | 20964 | -3.510 | -0.4914 | Yes | ||
| 42 | SERTAD3 | 1421076_at 1421077_at | 21036 | -3.666 | -0.4605 | Yes | ||
| 43 | SMAD4 | 1422485_at 1422486_a_at 1422487_at 1444205_at | 21315 | -4.417 | -0.4320 | Yes | ||
| 44 | TGFB1 | 1420653_at 1445360_at | 21657 | -6.176 | -0.3900 | Yes | ||
| 45 | CDKN2D | 1416253_at | 21682 | -6.381 | -0.3317 | Yes | ||
| 46 | KLK8 | 1419722_at | 21687 | -6.428 | -0.2719 | Yes | ||
| 47 | BCL6 | 1421818_at 1450381_a_at | 21780 | -7.247 | -0.2086 | Yes | ||
| 48 | PPT1 | 1420015_s_at 1420016_at 1422467_at 1422468_at 1444884_at | 21811 | -7.492 | -0.1402 | Yes | ||
| 49 | CDKN1B | 1419497_at 1434045_at | 21856 | -7.819 | -0.0693 | Yes | ||
| 50 | CDKN2C | 1416868_at 1439164_at | 21857 | -7.825 | 0.0036 | Yes |
