DatasetSet_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls
#ATM_minus_versus_ATM_plus_repos
Phenotypephenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in classATM_plus
GeneSetPROTEIN_KINASE_CASCADE
Enrichment Score (ES)-0.41399407
Normalized Enrichment Score (NES)-1.7236104
Nominal p-value0.0
FDR q-value0.282586
FWER p-Value0.954
Table: GSEA Results Summary



Fig 1: Enrichment plot: PROTEIN_KINASE_CASCADE   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1FYN1417558_at 1441647_at 1448765_at5194.286-0.0140No
2F21418897_at5664.155-0.0065No
3HMOX11448239_at5774.1220.0027No
4BLK1422775_at6103.9960.0105No
5ECM11448613_at6413.9290.0182No
6BST21424921_at6673.8630.0260No
7ECT21419513_a_at8393.4790.0262No
8SLC35B21423927_at 1429007_at10033.1640.0260No
9GPR89A1424696_at10343.1200.0319No
10ATP2C11431196_at 1434386_at 1437738_at 1439215_at 1442742_at11193.0020.0350No
11NRTN1449281_at11232.9960.0418No
12SOD11435304_at 1440222_at 1440896_at 1451124_at 1459976_s_at11572.9520.0472No
13ITGB1BP11422157_a_at 1445697_at13162.7780.0463No
14MALT11445068_at 1456126_at 1456429_at14902.6040.0444No
15MAPK8IP31416437_a_at 1425975_a_at 1436676_at 1460628_at16262.4520.0439No
16DUSP91433844_a_at 1433845_x_at 1454737_at16542.4200.0482No
17MAPKAPK21426648_at16682.4130.0532No
18MAP3K61449901_a_at16712.4120.0588No
19GSG21450886_at16732.4110.0643No
20LGALS11419573_a_at 1455439_a_at16752.4100.0699No
21LGALS91421217_a_at16832.4000.0751No
22FAF11418242_at 1434370_s_at16912.3940.0803No
23CCL21420380_at17712.3260.0821No
24SOCS21418507_s_at 1438470_at 1441476_at 1442586_at 1446085_at 1449109_at19162.2100.0806No
25C5AR11422190_at 1439902_at19542.1800.0840No
26TNFRSF10B1421296_at 1422344_s_at20952.0790.0823No
27SOCS31416576_at 1455899_x_at 1456212_x_at21122.0710.0864No
28PLK21427005_at21682.0240.0886No
29RHOC1435394_s_at 1448605_at25061.8320.0773No
30RIPK11419508_at 1439273_at 1449485_at25121.8300.0813No
31NMI1425719_a_at26891.7540.0772No
32EEF1D1428135_a_at 1439439_x_at 1449506_a_at 1459754_x_at27741.7270.0774No
33LTBR1416435_at28431.7010.0782No
34MAPK101437195_x_at 1448342_at 1458002_at 1458062_at 1458513_at28441.7000.0821No
35ADRA2A1423022_at 1433600_at 1433601_at29081.6780.0831No
36ADRA1A1421659_at 1459351_at29491.6640.0852No
37RPS6KA41438243_at 1448498_at31781.5760.0783No
38IL31RA1445095_at 1451535_at35641.4550.0639No
39TPD52L11418412_at35961.4470.0658No
40OTUD7B1428953_at 1429139_at 1435552_at 1457716_at38901.3600.0555No
41TLR61421352_at39081.3550.0578No
42GHRL1448980_at39521.3470.0590No
43PRDX41416166_a_at 1416167_at 1431269_at40271.3270.0587No
44ADAM91416094_at40741.3140.0596No
45WNK21453355_at 1455424_at40751.3140.0626No
46SCG21450708_at41281.3030.0633No
47PPP5C1424115_at 1424116_x_at 1451242_a_at43311.2620.0569No
48TAOK21438208_at 1443642_at 1456826_at44991.2320.0520No
49MAP3K7IP11426898_at 1447692_x_at45241.2280.0538No
50MAST11432255_at 1449423_at45811.2170.0540No
51IRAK1BP11422683_at 1431771_a_at46011.2130.0560No
52ADRB31421555_at 1455918_at46231.2080.0578No
53MKNK11417630_at 1417631_at 1454119_at46461.2020.0596No
54STAMBP1416317_a_at 1431962_a_at47151.1890.0592No
55LITAF1416303_at 1416304_at48461.1640.0559No
56SQSTM11440076_at 1442237_at 1444021_at 1450957_a_at48681.1590.0576No
57IL201421608_at49341.1470.0573No
58CFLAR1424996_at 1425686_at 1425687_at 1439600_at 1449317_at50111.1290.0564No
59MAP3K91432981_at 1442218_at 1455684_at 1458922_at50221.1280.0586No
60MAPK131448871_at52781.0860.0493No
61MAP3K71419988_at 1425795_a_at 1426627_at 1449693_at 1455441_at 1458787_at53181.0780.0500No
62IL12A1425454_a_at56411.0300.0376No
63MARK11419834_x_at 1425509_at 1425510_at 1425511_at 1449630_s_at56751.0250.0384No
64TNFSF101420412_at 1439680_at 1459913_at57001.0230.0397No
65DUSP81418714_at58041.0090.0373No
66PPM1A1415678_at 1417221_at 1425537_at 1429500_at 1429501_s_at 1443903_at 1451943_a_at 1453171_s_at58231.0060.0388No
67GRM41457299_at60210.9840.0320No
68GJA11415800_at 1415801_at 1437992_x_at 1438650_x_at 1438945_x_at 1438973_x_at60780.9760.0317No
69RGS31425701_a_at 1427648_at 1449516_a_at 1454026_a_at61880.9590.0289No
70NF21421820_a_at 1427708_a_at 1450382_at 1451829_a_at62320.9520.0291No
71FPR11450808_at63820.9300.0244No
72VAPA1416465_a_at 1416466_at 1448349_at65760.9010.0176No
73DAPK11426915_at 1427358_a_at 1445032_at65990.8970.0187No
74FGFR11424050_s_at 1425911_a_at 1436551_at68420.8640.0095No
75TRIM131417888_at70210.8370.0032No
76WNK31443924_at71230.8230.0005No
77MAP2K71421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at73590.793-0.0085No
78STK31418512_at 1418513_at 1446289_at 1446627_at 1449114_at73910.789-0.0081No
79RPS6KA21417542_at 1417543_at 1441311_at74020.788-0.0067No
80GNG31417428_at75770.765-0.0130No
81SGK21418739_at77220.747-0.0179No
82FGFR31421841_at 1425796_a_at77400.744-0.0170No
83GADD45B1420197_at 1449773_s_at 1450971_at77840.739-0.0172No
84IRAK11448668_a_at 1460649_at78360.731-0.0179No
85WNK41427196_at 1444133_at82180.680-0.0339No
86EDG21417143_at 1426110_a_at 1448606_at84020.657-0.0408No
87AKAP111434764_at85050.645-0.0440No
88FGF21449826_a_at86600.625-0.0496No
89MAPK141416703_at 1416704_at 1426104_at 1442364_at 1451927_a_at 1459617_at90380.581-0.0657No
90ADRA1B1422183_a_at92540.556-0.0743No
91PROK21419681_a_at 1426176_a_at 1451952_at93480.545-0.0773No
92CASP81424552_at94640.532-0.0814No
93CD811416330_at96810.506-0.0902No
94CASP11449265_at96830.506-0.0891No
95RGS41416286_at 1416287_at 1448285_at99940.471-0.1023No
96PTEN1422553_at 1441593_at 1444325_at 1450655_at 1454722_at 1455728_at 1457493_at101050.457-0.1063No
97SRPK11454042_a_at 1455107_at102270.446-0.1108No
98GOLT1B1449859_at 1460583_at102440.444-0.1105No
99MAPK8IP21418785_at 1418786_at 1435045_s_at 1449225_a_at 1455194_at102620.442-0.1103No
100GADD45G1453851_a_at105150.417-0.1210No
101TNFSF141421588_at 1450298_at105540.413-0.1217No
102STAT31424272_at 1426587_a_at 1459961_a_at 1460700_at106290.405-0.1242No
103PLEKHG51452248_at106960.397-0.1263No
104AMBP1416649_at107030.396-0.1257No
105DAPK21451453_at107040.396-0.1248No
106MAP3K21422250_at109950.361-0.1373No
107TDGF11450989_at110590.355-0.1394No
108RPS6KA51431050_at 1437625_at 1439004_at 1440343_at112300.336-0.1465No
109EDA2R1440085_at112390.335-0.1461No
110RIPK21421236_at 1450173_at113190.326-0.1489No
111NEK61451043_at113230.325-0.1483No
112EGF1418093_a_at115310.301-0.1572No
113CARD101449491_at115480.300-0.1572No
114SPRED11423160_at 1423161_s_at 1423162_s_at 1428777_at 1441517_at 1442859_at 1443652_x_at 1445228_at 1452911_at 1460116_s_at117030.284-0.1637No
115MDFI1420713_a_at 1425924_at119310.258-0.1735No
116EDG51428176_at 1447880_x_at119410.257-0.1733No
117TMED41448422_at 1448423_at121720.234-0.1834No
118SRC1423240_at 1450918_s_at126340.185-0.2043No
119MAP3K41421450_a_at 1447667_x_at 1450253_a_at 1459800_s_at128300.162-0.2129No
120TSPAN61416872_at 1448501_at128550.159-0.2136No
121CHRNA71440681_at 1450299_at128750.156-0.2141No
122HTR2B1422125_at129140.151-0.2155No
123MYD881419272_at129760.145-0.2180No
124SRPK21417134_at 1417135_at 1417136_s_at 1431372_at 1435746_at 1440080_at 1442241_at 1442980_at 1447755_at 1448603_at131530.123-0.2258No
125MAPK81420931_at 1420932_at 1437045_at 1440856_at 1457936_at132260.116-0.2289No
126CARTPT1422825_at132920.106-0.2316No
127SPRED21423001_at 1434403_at 1436892_at 1441415_at 1441802_at133060.105-0.2320No
128NF11438067_at 1441523_at 1443097_at 1452525_a_at134230.091-0.2371No
129CXXC51431469_a_at 1448960_at135660.073-0.2435No
130MAP3K31426686_s_at 1426687_at 1436522_at137200.051-0.2505No
131SNF1LK1419766_at 1459601_at137720.044-0.2527No
132NLK1419112_at 1435970_at 1443279_at 1445427_at 1456467_s_at139960.016-0.2630No
133TRAF71424320_a_at140940.003-0.2674No
134HIPK21424863_a_at 1424864_at 1425983_x_at 1428433_at 1429566_a_at 1432523_at 1446167_at 1448631_a_at 1456022_at 1458520_at14284-0.026-0.2761No
135TRAF61421376_at 1421377_at 1435350_at 1443288_at 1446940_at 1446977_at14353-0.036-0.2791No
136DUSP41428834_at14418-0.045-0.2820No
137SECTM11419478_at 1419479_at14553-0.068-0.2880No
138NEK111441525_at 1445012_at14662-0.084-0.2928No
139CD241416034_at 1437502_x_at 1448182_a_at14737-0.094-0.2960No
140PLCE11452398_at14752-0.097-0.2964No
141SHC11422853_at 1422854_at14924-0.125-0.3040No
142GPS21417796_at14938-0.127-0.3043No
143CD401439221_s_at 1449473_s_at 1460415_a_at14984-0.135-0.3061No
144CCR21421186_at 1421187_at 1421188_at 1460067_at15117-0.157-0.3118No
145CAMKK21424474_a_at 1424475_at 1424476_at 1455401_at15135-0.159-0.3122No
146PTPLAD11433706_a_at 1452427_s_at 1454698_at15324-0.190-0.3204No
147MAP4K51427083_a_at 1427084_a_at 1427376_a_at 1440059_at 1445426_at 1446348_at 1447204_at15348-0.195-0.3211No
148DAPK31423446_at 1456496_at15471-0.215-0.3262No
149PIK3CB1445731_at 1453069_at15590-0.237-0.3311No
150MAPK111421925_at 1421926_at15750-0.271-0.3378No
151FKBP1A1416036_at 1438795_x_at 1438958_x_at 1448184_at 1456196_x_at16008-0.325-0.3489No
152MAP4K31444406_at16035-0.333-0.3493No
153MKNK21418300_a_at 1449029_at16046-0.335-0.3490No
154NDFIP11424820_a_at 1424821_at 1451493_at16227-0.376-0.3564No
155TRADD1429117_at 1439910_a_at 1452622_a_at16354-0.409-0.3613No
156MBIP1424405_at16447-0.430-0.3645No
157STK38L1435877_at 1435878_at 1455183_at16470-0.438-0.3645No
158RPL171423855_x_at 1435791_x_at 1453752_at16511-0.446-0.3653No
159GPS11415699_a_at16522-0.449-0.3648No
160STK41421107_at 1434159_at 1436015_s_at16530-0.452-0.3640No
161MIB21424862_s_at16619-0.477-0.3670No
162REL1420710_at16635-0.480-0.3666No
163TNIK1443802_at16674-0.490-0.3672No
164MAP3K131430137_at 1440749_at 1447699_at16696-0.498-0.3670No
165IFNAR21427691_a_at 1440169_x_at 1451462_a_at16697-0.498-0.3658No
166DAXX1419026_at16736-0.509-0.3664No
167MAP3K101436373_at 1440500_at 1457456_at 1458651_at16842-0.543-0.3700No
168FASLG1418803_a_at 1449235_at17094-0.623-0.3801No
169HGS1416540_at17170-0.652-0.3821No
170DUSP161418401_a_at 1440615_at 1440651_at17261-0.683-0.3846No
171RHOA1437628_s_at17319-0.701-0.3856No
172ERC11421501_a_at 1424247_at 1441493_at 1444356_at 1451279_at17322-0.702-0.3841No
173LATS21419678_at 1419679_at 1425420_s_at 1426156_at 1437101_at 1439441_x_at17445-0.756-0.3880No
174CLCF11437270_a_at 1437271_at 1450262_at17521-0.786-0.3896No
175TMEM1011451315_at17536-0.791-0.3884No
176SLC44A21428065_at 1438559_x_at 1438860_a_at17698-0.856-0.3938No
177MAP4K41422615_at 1440609_at 1448050_s_at 1459912_at17705-0.864-0.3921No
178MAP2K41426233_at 1442679_at 1451982_at17730-0.871-0.3912No
179MAPK91421876_at 1421877_at 1421878_at17782-0.895-0.3915No
180CHUK1417091_at 1428210_s_at 1451383_a_at17804-0.903-0.3903No
181MARK21415952_at 1415953_s_at 1435889_at 1444303_at17938-0.960-0.3942No
182ADRB21437302_at18015-0.987-0.3955No
183ADORA2B1434430_s_at 1434431_x_at 1434772_at 1450214_at18177-1.033-0.4005No
184SOCS61435492_at 1450129_a_at 1452764_at 1459350_at18278-1.070-0.4026No
185UBE2N1422559_at 1435384_at18407-1.125-0.4059No
186F2R1437308_s_at 1450852_s_at18446-1.142-0.4050No
187IRAK21436507_at18479-1.160-0.4038No
188ZDHHC131428307_at 1460048_at18533-1.184-0.4035No
189PKN11458674_at 1459231_at18608-1.215-0.4041No
190FGF131418497_at 1418498_at18634-1.229-0.4024No
191ICK1448310_at 1454243_at 1455687_at18887-1.368-0.4108Yes
192TRAF3IP21445985_at 1448508_at18906-1.378-0.4084Yes
193STAT5B1422102_a_at 1422103_a_at18936-1.397-0.4065Yes
194TGFA1421942_s_at 1450421_at19000-1.433-0.4061Yes
195FADD1416888_at 1446499_at19039-1.457-0.4045Yes
196DUSP221441723_at 1448985_at19053-1.465-0.4017Yes
197DUSP101417163_at 1417164_at19106-1.503-0.4006Yes
198TICAM11454676_s_at19114-1.509-0.3974Yes
199ATP6AP21423662_at 1437688_x_at 1439456_x_at19137-1.524-0.3949Yes
200MAPK8IP11425679_a_at 1440619_at19157-1.537-0.3922Yes
201STAT41448713_at19273-1.609-0.3938Yes
202CCM21434648_a_at 1434649_at 1456290_x_at 1457339_at19347-1.662-0.3933Yes
203HCLS11418842_at19361-1.671-0.3900Yes
204TBK11422469_at 1445571_at 1460315_s_at19445-1.737-0.3898Yes
205MAP3K121417115_at 1438908_at 1456565_s_at19465-1.743-0.3866Yes
206TAOK31435964_a_at 1444366_at 1444881_at 1447257_at 1455733_at19478-1.757-0.3831Yes
207STAT21421911_at 1450403_at19492-1.766-0.3796Yes
208IKBKG1421208_at 1421209_s_at 1435646_at 1435647_at 1450161_at 1454690_at19699-1.951-0.3845Yes
209MIER11433755_at 1443400_at 1443879_at 1453760_at19700-1.952-0.3800Yes
210PAK11420979_at 1420980_at 1450070_s_at 1459029_at19738-1.986-0.3771Yes
211TFG1415887_at 1438053_at19754-1.997-0.3732Yes
212BCL101418970_a_at 1418971_x_at 1418972_at 1443524_x_at19756-1.997-0.3686Yes
213ADRA2C1422335_at 1435296_at 1439762_x_at 1457328_at19763-1.999-0.3642Yes
214STAT5A1421469_a_at 1450259_a_at19892-2.079-0.3653Yes
215TRIP61449041_a_at19965-2.144-0.3636Yes
216MINK11449362_a_at20055-2.224-0.3626Yes
217CXCR41448710_at20095-2.256-0.3591Yes
218OXSR11426933_at20154-2.315-0.3564Yes
219PINK11441937_s_at 1451148_at20157-2.320-0.3511Yes
220GPR1771423824_at 1423825_at 1437434_a_at 1458319_at20199-2.363-0.3475Yes
221NUP621415925_a_at 1415926_at 1437612_at 1438917_x_at 1447905_x_at 1448150_at20265-2.430-0.3449Yes
222FYB1452117_a_at20277-2.441-0.3397Yes
223TMEM9B1417874_at 1448867_at20296-2.471-0.3348Yes
224BCL31418133_at20382-2.577-0.3327Yes
225SH2D3C1415886_at20414-2.617-0.3281Yes
226MAP3K111450669_at20460-2.667-0.3240Yes
227SNF1LK21444472_at 1457276_at20473-2.692-0.3183Yes
228DBNL1460334_at20504-2.735-0.3133Yes
229TRAF21451233_at20539-2.786-0.3084Yes
230CANT11421476_a_at 1433709_at 1451688_s_at20628-2.916-0.3057Yes
231MDFIC1427040_at20673-2.979-0.3008Yes
232RELA1419536_a_at20799-3.184-0.2992Yes
233CC2D1A1426422_at20862-3.316-0.2943Yes
234MAP3K7IP21423462_at 1451003_at20887-3.362-0.2876Yes
235CRKL1421953_at 1421954_at 1425604_at 1436950_at20897-3.384-0.2802Yes
236LAX11438687_at20919-3.427-0.2732Yes
237BIRC21418854_at21087-3.757-0.2722Yes
238TNFAIP31433699_at 1450829_at21180-3.976-0.2672Yes
239NDFIP21452066_a_at21240-4.142-0.2603Yes
240DUSP61415834_at21252-4.176-0.2511Yes
241FLNA1426677_at21289-4.293-0.2428Yes
242SCOTIN1423986_a_at 1437503_a_at21312-4.389-0.2336Yes
243DUSP21450698_at21387-4.670-0.2262Yes
244IKBKE1417813_at21455-4.927-0.2178Yes
245MADD1425735_at 1455502_at21500-5.159-0.2078Yes
246EDARADD1421213_at 1433132_at 1433133_at 1437800_at21571-5.590-0.1981Yes
247STK17B1423452_at 1430165_at 1450997_at21589-5.696-0.1856Yes
248TNFRSF1A1417291_at21597-5.736-0.1726Yes
249SOCS11440047_at 1450446_a_at21625-5.963-0.1600Yes
250MAP4K21428297_at 1434833_at 1450244_a_at21678-6.348-0.1477Yes
251STAT11420915_at 1440481_at 1450033_a_at 1450034_at21734-6.804-0.1344Yes
252SLC20A11438824_at 1446441_at 1448568_a_at21735-6.812-0.1186Yes
253PIAS11422581_at 1446448_at 1455486_at 1455611_at21804-7.438-0.1045Yes
254IFNAR11442222_at 1449026_at21818-7.561-0.0875Yes
255WNK11433676_at 1436746_at 1437888_at 1439970_at21831-7.714-0.0701Yes
256STK381416252_at 1431303_at 1439938_at21845-7.794-0.0526Yes
257ZDHHC171434397_at 1447656_at 1455986_at 1458084_at 1458363_at21871-7.861-0.0355Yes
258TEC1441524_at 1460204_at21906-8.156-0.0182Yes
259RHOH1429319_at 1441385_at 1443015_at21921-8.3940.0007Yes
Table: GSEA details [plain text format]



Fig 2: PROTEIN_KINASE_CASCADE   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: PROTEIN_KINASE_CASCADE: Random ES distribution   
Gene set null distribution of ES for PROTEIN_KINASE_CASCADE