Details for gene set CHROMOSOME[GSEA]

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	CHROMOSOME
Enrichment Score (ES)	0.503004
Normalized Enrichment Score (NES)	1.8912053
Nominal p-value	0.0
FDR q-value	0.0142827695
FWER p-Value	0.188

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SUV39H2	1422979_at 1433996_at 1436561_at	90	7.866	0.0328	Yes
2	TIPIN	1426612_at	93	7.774	0.0692	Yes
3	RFC3	1423700_at 1432538_a_at	206	5.897	0.0918	Yes
4	RFC4	1424321_at 1438161_s_at	219	5.766	0.1183	Yes
5	SMC1A	1417830_at 1417831_at 1417832_at	256	5.456	0.1423	Yes
6	RCC1	1416962_at	309	5.142	0.1641	Yes
7	MKI67IP	1424001_at	334	5.045	0.1867	Yes
8	NUFIP1	1448802_at	375	4.848	0.2076	Yes
9	BIRC5	1424278_a_at	545	4.191	0.2196	Yes
10	SYCE2	1429270_a_at	551	4.184	0.2390	Yes
11	MAD2L1	1422460_at	698	3.780	0.2501	Yes
12	TIMELESS	1417586_at 1417587_at	796	3.555	0.2623	Yes
13	RPA2	1416433_at 1454011_a_at	818	3.519	0.2779	Yes
14	RFC5	1452917_at	835	3.489	0.2935	Yes
15	RAD51	1418281_at	836	3.487	0.3099	Yes
16	LRPPRC	1424353_at	887	3.375	0.3235	Yes
17	BUB1B	1416961_at 1447362_at 1447363_s_at	946	3.263	0.3361	Yes
18	PMF1	1416707_a_at 1438173_x_at	1048	3.105	0.3461	Yes
19	HELLS	1417541_at 1430139_at 1453361_at	1219	2.886	0.3519	Yes
20	CDT1	1424143_a_at 1424144_at 1455791_at	1225	2.881	0.3652	Yes
21	ZWILCH	1416757_at	1239	2.858	0.3780	Yes
22	CENPE	1435005_at 1439040_at	1385	2.705	0.3841	Yes
23	TUBG1	1417144_at	1390	2.702	0.3966	Yes
24	CENPA	1441864_x_at 1444416_at 1450842_a_at	1542	2.550	0.4016	Yes
25	APC	1420956_at 1420957_at 1435543_at 1450056_at	1550	2.542	0.4133	Yes
26	ZWINT	1423724_at 1427539_a_at 1427540_at 1429786_a_at 1429787_x_at 1444717_at 1455382_at	1573	2.514	0.4241	Yes
27	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.4340	Yes
28	CHEK1	1420031_at 1420032_at 1439208_at 1449708_s_at 1450677_at	1615	2.468	0.4454	Yes
29	HMGN1	1422495_a_at 1422496_at 1438940_x_at 1455897_x_at	1834	2.273	0.4461	Yes
30	PCNA	1417947_at	1885	2.232	0.4543	Yes
31	KIF22	1423813_at 1437716_x_at 1451128_s_at	1944	2.185	0.4619	Yes
32	MAF	1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at	1970	2.170	0.4710	Yes
33	SMARCE1	1422675_at 1422676_at 1430822_at	2269	1.970	0.4666	Yes
34	MCM2	1434079_s_at 1448777_at	2322	1.939	0.4733	Yes
35	OIP5	1430617_at	2329	1.935	0.4821	Yes
36	KLHDC3	1415991_a_at 1448164_at 1454747_a_at 1455910_at	2443	1.868	0.4857	Yes
37	CENPC1	1420441_at	2610	1.785	0.4865	Yes
38	ING2	1419111_at	2644	1.771	0.4933	Yes
39	INCENP	1423092_at 1423093_at 1439436_x_at 1441314_at	2653	1.768	0.5012	Yes
40	TTN	1427445_a_at 1427446_s_at 1431928_at 1444083_at 1444638_at 1446450_at	2890	1.686	0.4984	Yes
41	SUV39H1	1427382_a_at 1432227_at 1432236_a_at	3081	1.612	0.4972	Yes
42	H1FNT	1430181_at 1441954_s_at	3224	1.560	0.4980	Yes
43	BUB1	1424046_at 1438571_at	3491	1.476	0.4928	Yes
44	REPIN1	1425535_at 1434044_at 1457387_at	3543	1.461	0.4973	Yes
45	TNP1	1415924_at 1438632_x_at	3569	1.454	0.5030	Yes
46	DMC1	1420335_at 1449819_at	4079	1.313	0.4859	No
47	RPA1	1423293_at 1437309_a_at 1441240_at	4687	1.195	0.4637	No
48	PSEN2	1425869_a_at 1431542_at	4952	1.143	0.4569	No
49	HMGB1	1416176_at 1425048_a_at 1435324_x_at	5118	1.113	0.4546	No
50	HDAC8	1428933_at	5446	1.056	0.4446	No
51	XRCC4	1424601_at 1424602_s_at 1445922_at	5488	1.050	0.4477	No
52	NOL6	1424472_at 1425629_a_at	5705	1.023	0.4426	No
53	CLASP1	1427353_at 1452265_at 1459233_at 1460102_at	5816	1.007	0.4423	No
54	RAN	1443131_at 1446819_at 1447478_at 1460551_at	5842	1.004	0.4458	No
55	SUGT1	1426424_at 1426425_at 1446757_at	6339	0.936	0.4275	No
56	SYCE1	1428685_at	6390	0.929	0.4296	No
57	POLA1	1419397_at 1456285_at 1459319_at 1459963_at	7331	0.795	0.3903	No
58	SMC4	1427275_at 1427276_at 1441677_at 1452197_at	7924	0.721	0.3665	No
59	MYCN	1417155_at 1425922_a_at 1425923_at	7938	0.720	0.3693	No
60	APTX	1450921_at	9289	0.553	0.3101	No
61	SMC2	1429658_a_at 1429659_at 1429660_s_at 1448635_at 1458479_at	9972	0.473	0.2811	No
62	POLG2	1450816_at	10090	0.458	0.2778	No
63	DCTN2	1424461_at	11170	0.343	0.2300	No
64	SUMO3	1422457_s_at 1439372_at	12709	0.176	0.1604	No
65	TOP2A	1427724_at 1442454_at 1454694_a_at	12942	0.148	0.1505	No
66	SMARCA5	1440048_at	13154	0.123	0.1414	No
67	JUN	1417409_at 1448694_at	13265	0.110	0.1369	No
68	CBX1	1422935_x_at 1431773_at 1433718_a_at 1436266_x_at 1450797_a_at	13442	0.089	0.1292	No
69	CDCA5	1416802_a_at 1448466_at	13512	0.080	0.1264	No
70	H2AFY2	1426363_x_at 1444008_at 1447241_at	13864	0.031	0.1105	No
71	ERCC1	1417328_at 1437447_s_at 1441838_at 1445266_at	14619	-0.077	0.0763	No
72	CENPF	1427161_at 1452334_at 1458447_at	14933	-0.127	0.0626	No
73	RGS12	1429380_at 1453129_a_at 1457511_at 1459566_at	15167	-0.164	0.0527	No
74	FOXC1	1419485_at 1419486_at	15213	-0.172	0.0514	No
75	BUB3	1416815_s_at 1448058_s_at 1448473_at 1459104_at 1459918_at	15306	-0.186	0.0481	No
76	H2AFY	1424572_a_at	15692	-0.258	0.0317	No
77	STAG3	1460229_at	15884	-0.298	0.0243	No
78	TOP2B	1416731_at 1416732_at 1448458_at 1456688_at	15901	-0.301	0.0250	No
79	RFC2	1417503_at 1457638_x_at 1457669_x_at	16192	-0.368	0.0135	No
80	MIS12	1424717_at	16561	-0.461	-0.0012	No
81	ERCC4	1432272_a_at 1440237_at 1441003_at 1448984_at	16584	-0.469	-0.0000	No
82	TINF2	1437166_at 1451163_at	16615	-0.476	0.0008	No
83	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	16777	-0.524	-0.0041	No
84	PAFAH1B1	1417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at	16791	-0.527	-0.0022	No
85	RFC1	1418342_at 1449050_at 1451920_a_at	16812	-0.533	-0.0006	No
86	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17080	-0.619	-0.0099	No
87	PSEN1	1420261_at 1421853_at 1425549_at 1450399_at	17630	-0.831	-0.0312	No
88	ZW10	1424891_a_at 1431747_at 1445206_at	17780	-0.894	-0.0338	No
89	PAM	1418908_at 1445797_at	18380	-1.112	-0.0560	No
90	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18495	-1.167	-0.0558	No
91	TERF2IP	1419381_at 1456400_at	18509	-1.176	-0.0508	No
92	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	18569	-1.202	-0.0479	No
93	PURB	1419640_at 1419641_at 1419642_at 1428254_at 1436940_at	18577	-1.204	-0.0426	No
94	UPF1	1419685_at	18934	-1.394	-0.0523	No
95	TNKS	1432630_at 1433778_at 1445358_at 1459910_at	19138	-1.525	-0.0545	No
96	RPA3	1448938_at	19181	-1.555	-0.0491	No
97	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	19667	-1.929	-0.0622	No
98	TOP1	1423474_at 1438495_at 1457573_at 1459672_at	19804	-2.024	-0.0590	No
99	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	19812	-2.030	-0.0498	No
100	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	20789	-3.168	-0.0796	No
101	TERF2	1421147_at 1455651_at 1459650_at	21248	-4.163	-0.0810	No
102	JUNB	1415899_at	21503	-5.184	-0.0683	No
103	LIG4	1439487_at	21518	-5.251	-0.0443	No
104	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0216	No
105	BCL6	1421818_at 1450381_a_at	21780	-7.247	0.0071	No