Details for gene set CHROMOSOMAL

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_minus
GeneSet	CHROMOSOMAL_PART
Enrichment Score (ES)	0.52106667
Normalized Enrichment Score (NES)	1.891216
Nominal p-value	0.0
FDR q-value	0.015234954
FWER p-Value	0.188

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SUV39H2	1422979_at 1433996_at 1436561_at	90	7.866	0.0411	Yes
2	TIPIN	1426612_at	93	7.774	0.0858	Yes
3	RFC3	1423700_at 1432538_a_at	206	5.897	0.1146	Yes
4	RFC4	1424321_at 1438161_s_at	219	5.766	0.1472	Yes
5	SMC1A	1417830_at 1417831_at 1417832_at	256	5.456	0.1770	Yes
6	RCC1	1416962_at	309	5.142	0.2042	Yes
7	NUFIP1	1448802_at	375	4.848	0.2291	Yes
8	BIRC5	1424278_a_at	545	4.191	0.2455	Yes
9	SYCE2	1429270_a_at	551	4.184	0.2693	Yes
10	MAD2L1	1422460_at	698	3.780	0.2844	Yes
11	TIMELESS	1417586_at 1417587_at	796	3.555	0.3004	Yes
12	RPA2	1416433_at 1454011_a_at	818	3.519	0.3197	Yes
13	RFC5	1452917_at	835	3.489	0.3391	Yes
14	BUB1B	1416961_at 1447362_at 1447363_s_at	946	3.263	0.3528	Yes
15	PMF1	1416707_a_at 1438173_x_at	1048	3.105	0.3660	Yes
16	HELLS	1417541_at 1430139_at 1453361_at	1219	2.886	0.3749	Yes
17	CDT1	1424143_a_at 1424144_at 1455791_at	1225	2.881	0.3912	Yes
18	ZWILCH	1416757_at	1239	2.858	0.4071	Yes
19	CENPE	1435005_at 1439040_at	1385	2.705	0.4160	Yes
20	CENPA	1441864_x_at 1444416_at 1450842_a_at	1542	2.550	0.4235	Yes
21	APC	1420956_at 1420957_at 1435543_at 1450056_at	1550	2.542	0.4379	Yes
22	ZWINT	1423724_at 1427539_a_at 1427540_at 1429786_a_at 1429787_x_at 1444717_at 1455382_at	1573	2.514	0.4513	Yes
23	MCM7	1416030_a_at 1416031_s_at 1438320_s_at	1610	2.476	0.4639	Yes
24	HMGN1	1422495_a_at 1422496_at 1438940_x_at 1455897_x_at	1834	2.273	0.4668	Yes
25	PCNA	1417947_at	1885	2.232	0.4773	Yes
26	KIF22	1423813_at 1437716_x_at 1451128_s_at	1944	2.185	0.4873	Yes
27	MAF	1435828_at 1437473_at 1444073_at 1447849_s_at 1447945_at 1456060_at	1970	2.170	0.4986	Yes
28	MCM2	1434079_s_at 1448777_at	2322	1.939	0.4937	Yes
29	OIP5	1430617_at	2329	1.935	0.5046	Yes
30	KLHDC3	1415991_a_at 1448164_at 1454747_a_at 1455910_at	2443	1.868	0.5101	Yes
31	CENPC1	1420441_at	2610	1.785	0.5128	Yes
32	INCENP	1423092_at 1423093_at 1439436_x_at 1441314_at	2653	1.768	0.5211	Yes
33	H1FNT	1430181_at 1441954_s_at	3224	1.560	0.5040	No
34	BUB1	1424046_at 1438571_at	3491	1.476	0.5003	No
35	REPIN1	1425535_at 1434044_at 1457387_at	3543	1.461	0.5064	No
36	TNP1	1415924_at 1438632_x_at	3569	1.454	0.5136	No
37	RPA1	1423293_at 1437309_a_at 1441240_at	4687	1.195	0.4693	No
38	PSEN2	1425869_a_at 1431542_at	4952	1.143	0.4638	No
39	CLASP1	1427353_at 1452265_at 1459233_at 1460102_at	5816	1.007	0.4301	No
40	RAN	1443131_at 1446819_at 1447478_at 1460551_at	5842	1.004	0.4348	No
41	SUGT1	1426424_at 1426425_at 1446757_at	6339	0.936	0.4175	No
42	SYCE1	1428685_at	6390	0.929	0.4205	No
43	POLA1	1419397_at 1456285_at 1459319_at 1459963_at	7331	0.795	0.3821	No
44	SMC4	1427275_at 1427276_at 1441677_at 1452197_at	7924	0.721	0.3592	No
45	MYCN	1417155_at 1425922_a_at 1425923_at	7938	0.720	0.3627	No
46	APTX	1450921_at	9289	0.553	0.3041	No
47	SMC2	1429658_a_at 1429659_at 1429660_s_at 1448635_at 1458479_at	9972	0.473	0.2756	No
48	DCTN2	1424461_at	11170	0.343	0.2228	No
49	SUMO3	1422457_s_at 1439372_at	12709	0.176	0.1535	No
50	CBX1	1422935_x_at 1431773_at 1433718_a_at 1436266_x_at 1450797_a_at	13442	0.089	0.1205	No
51	CDCA5	1416802_a_at 1448466_at	13512	0.080	0.1178	No
52	H2AFY2	1426363_x_at 1444008_at 1447241_at	13864	0.031	0.1019	No
53	ERCC1	1417328_at 1437447_s_at 1441838_at 1445266_at	14619	-0.077	0.0678	No
54	CENPF	1427161_at 1452334_at 1458447_at	14933	-0.127	0.0542	No
55	FOXC1	1419485_at 1419486_at	15213	-0.172	0.0425	No
56	BUB3	1416815_s_at 1448058_s_at 1448473_at 1459104_at 1459918_at	15306	-0.186	0.0393	No
57	H2AFY	1424572_a_at	15692	-0.258	0.0232	No
58	STAG3	1460229_at	15884	-0.298	0.0162	No
59	TOP2B	1416731_at 1416732_at 1448458_at 1456688_at	15901	-0.301	0.0172	No
60	RFC2	1417503_at 1457638_x_at 1457669_x_at	16192	-0.368	0.0060	No
61	MIS12	1424717_at	16561	-0.461	-0.0082	No
62	ERCC4	1432272_a_at 1440237_at 1441003_at 1448984_at	16584	-0.469	-0.0065	No
63	TINF2	1437166_at 1451163_at	16615	-0.476	-0.0051	No
64	DNMT3A	1423063_at 1423064_at 1423065_at 1423066_at 1442309_at 1460324_at	16777	-0.524	-0.0095	No
65	PAFAH1B1	1417086_at 1427703_at 1439656_at 1441404_at 1444125_at 1448578_at 1456947_at 1460199_a_at	16791	-0.527	-0.0070	No
66	RFC1	1418342_at 1449050_at 1451920_a_at	16812	-0.533	-0.0049	No
67	CBX5	1421932_at 1421933_at 1421934_at 1450416_at 1454636_at 1459845_at	17080	-0.619	-0.0135	No
68	PSEN1	1420261_at 1421853_at 1425549_at 1450399_at	17630	-0.831	-0.0339	No
69	ZW10	1424891_a_at 1431747_at 1445206_at	17780	-0.894	-0.0355	No
70	PAM	1418908_at 1445797_at	18380	-1.112	-0.0566	No
71	TMPO	1421237_at 1426020_at 1426349_s_at 1428976_at 1452036_a_at	18495	-1.167	-0.0551	No
72	RB1	1417850_at 1441494_at 1444400_at 1444454_at 1457447_at	18569	-1.202	-0.0515	No
73	PURB	1419640_at 1419641_at 1419642_at 1428254_at 1436940_at	18577	-1.204	-0.0449	No
74	UPF1	1419685_at	18934	-1.394	-0.0531	No
75	TNKS	1432630_at 1433778_at 1445358_at 1459910_at	19138	-1.525	-0.0537	No
76	RPA3	1448938_at	19181	-1.555	-0.0466	No
77	ATRX	1420945_at 1420946_at 1420947_at 1438750_at 1441014_at 1441771_at 1450051_at 1453734_at 1456832_at	19667	-1.929	-0.0577	No
78	UBE2I	1422712_a_at 1422713_a_at 1425478_x_at 1453189_at	19812	-2.030	-0.0526	No
79	PURA	1420628_at 1438219_at 1449934_at 1453783_at 1456898_at	20789	-3.168	-0.0791	No
80	TERF2	1421147_at 1455651_at 1459650_at	21248	-4.163	-0.0761	No
81	JUNB	1415899_at	21503	-5.184	-0.0579	No
82	MCM3	1420029_at 1426653_at	21664	-6.234	-0.0293	No
83	BCL6	1421818_at 1450381_a_at	21780	-7.247	0.0071	No