Details for gene set V$TBP

Table: GSEA Results Summary

Dataset	Set_01_ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus.phenotype_ATM_minus_versus_ATM_plus.cls #ATM_minus_versus_ATM_plus_repos
Phenotype	phenotype_ATM_minus_versus_ATM_plus.cls#ATM_minus_versus_ATM_plus_repos
Upregulated in class	ATM_plus
GeneSet	V$TBP_01
Enrichment Score (ES)	-0.40149468
Normalized Enrichment Score (NES)	-1.6059632
Nominal p-value	0.0
FDR q-value	0.10446063
FWER p-Value	0.475

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	HDAC9	1421306_a_at 1434572_at	82	8.115	0.0291	No
2	PRKAA2	1429463_at 1429464_at	1337	2.755	-0.0174	No
3	ACYP2	1427943_at	1446	2.651	-0.0116	No
4	SLC35F5	1452059_at	1687	2.398	-0.0129	No
5	RPS19	1449243_a_at 1460442_at	2085	2.085	-0.0227	No
6	TPM2	1419738_a_at 1419739_at 1425028_a_at 1449577_x_at	2350	1.923	-0.0270	No
7	COL10A1	1422253_at	2460	1.861	-0.0245	No
8	SFRS3	1416150_a_at 1416151_at 1416152_a_at 1454993_a_at	2489	1.843	-0.0183	No
9	NDST4	1421318_at 1431452_at 1450195_at	2605	1.786	-0.0164	No
10	BRAF	1425693_at 1435434_at 1435480_at 1442749_at 1445786_at 1447940_a_at 1447941_x_at 1456505_at 1458641_at	2616	1.782	-0.0096	No
11	FGF5	1426186_a_at 1438883_at	2678	1.758	-0.0053	No
12	CLCN1	1427591_at 1448082_at	2734	1.737	-0.0008	No
13	GRIK4	1437681_at	2816	1.710	0.0024	No
14	LUC7L	1428255_at 1431181_a_at 1431664_at 1452708_a_at	2998	1.643	0.0008	No
15	ITGA7	1418393_a_at	3048	1.625	0.0051	No
16	IGF1	1419519_at 1436497_at 1437401_at 1452014_a_at	3299	1.540	-0.0002	No
17	COL1A2	1446326_at 1450857_a_at	3355	1.524	0.0035	No
18	RAB5B	1422119_at 1437446_at	3369	1.520	0.0090	No
19	FXYD1	1421374_a_at	3402	1.509	0.0137	No
20	P2RX5	1449433_at	3523	1.468	0.0141	No
21	LGI1	1423183_at 1435851_at	3680	1.414	0.0127	No
22	USH3A	1438347_at	3685	1.413	0.0182	No
23	NOG	1422300_at	3697	1.410	0.0234	No
24	MYH8	1426650_at	3886	1.361	0.0203	No
25	KCTD15	1435339_at	4070	1.314	0.0172	No
26	ART5	1427759_a_at 1451553_at	4146	1.298	0.0190	No
27	NDRG2	1448154_at	4161	1.295	0.0236	No
28	BRUNOL4	1426929_at 1426930_at 1452240_at 1458475_at	4441	1.240	0.0158	No
29	NR0B1	1417760_at	4470	1.236	0.0196	No
30	DKK4	1425447_at	4671	1.198	0.0152	No
31	ASB16	1452023_at	4815	1.170	0.0134	No
32	S100A4	1424542_at	4895	1.154	0.0144	No
33	CHRDL1	1421295_at 1424945_at 1434201_at 1456722_at	5296	1.083	0.0004	No
34	GPSN2	1416352_s_at 1429681_a_at	5519	1.047	-0.0055	No
35	SLC3A1	1448741_at	5532	1.045	-0.0018	No
36	HOXC4	1422870_at	5707	1.022	-0.0057	No
37	CYP26B1	1460011_at	5892	1.000	-0.0101	No
38	COL13A1	1422866_at	6011	0.985	-0.0115	No
39	SYTL2	1421594_a_at 1456593_at	6093	0.974	-0.0113	No
40	RILP	1457696_at	6231	0.952	-0.0138	No
41	HOXB4	1451761_at 1460379_at	6336	0.937	-0.0147	No
42	POFUT1	1443881_at 1450137_at 1456323_at	6411	0.926	-0.0144	No
43	ABCC6	1421212_at	6487	0.914	-0.0141	No
44	ANGPT4	1438364_x_at 1440832_at 1450325_at	6665	0.890	-0.0187	No
45	TNFRSF17	1420782_at	7242	0.806	-0.0419	No
46	TCF1	1421234_at	7377	0.790	-0.0448	No
47	PNMA1	1429224_at	7443	0.782	-0.0446	No
48	HAND2	1422221_at 1436041_at 1443854_at 1446812_at	7496	0.776	-0.0439	No
49	HOXC5	1439885_at 1450832_at 1456301_at	7560	0.768	-0.0437	No
50	HSPB3	1449872_at	7981	0.713	-0.0601	No
51	TSC1	1422043_at 1439989_at 1455252_at	8044	0.703	-0.0601	No
52	DIRAS1	1425748_at 1451820_at 1455526_at	8069	0.700	-0.0584	No
53	MYOCD	1425808_a_at 1425978_at	8150	0.688	-0.0592	No
54	AGT	1423396_at	8182	0.684	-0.0579	No
55	TRPM4	1435549_at	8205	0.681	-0.0561	No
56	SOX9	1424950_at 1433889_at 1451538_at	8240	0.677	-0.0550	No
57	SOX5	1423500_a_at 1432189_a_at 1432190_at 1440827_x_at 1446461_at 1452511_at 1459261_at	8288	0.671	-0.0544	No
58	DES	1426731_at	8307	0.668	-0.0525	No
59	GPR23	1434186_at 1439665_at 1452424_at	8309	0.667	-0.0499	No
60	FGF21	1422916_at	8409	0.656	-0.0518	No
61	ZCCHC5	1437355_at	8427	0.654	-0.0499	No
62	FHL2	1419184_a_at	8444	0.652	-0.0480	No
63	SEMA4B	1427586_at 1455678_at	8564	0.638	-0.0509	No
64	HOXC6	1427361_at 1427362_x_at 1427454_at	8704	0.620	-0.0548	No
65	SH3GLB2	1426499_at	8739	0.617	-0.0538	No
66	ZFP95	1424892_at 1430562_at	8789	0.611	-0.0536	No
67	ASB5	1449356_at	8930	0.595	-0.0576	No
68	GCG	1425952_a_at	9141	0.569	-0.0650	No
69	CUL3	1422794_at 1422795_at 1434717_at 1434718_at 1450756_s_at	9324	0.549	-0.0711	No
70	LHX5	1420348_at	9333	0.547	-0.0693	No
71	B3GALT6	1421155_at 1435252_at 1440340_at	9351	0.545	-0.0678	No
72	ESRRG	1421747_at 1455267_at 1457896_at	9421	0.536	-0.0688	No
73	TEF	1424175_at 1438033_at 1450184_s_at	9507	0.526	-0.0706	No
74	LRRTM3	1434759_at 1434760_at 1434761_at 1440112_at 1444477_at	9784	0.495	-0.0813	No
75	PTF1A	1419424_at	9882	0.484	-0.0838	No
76	HOXB5	1418415_at	10060	0.462	-0.0900	No
77	GPR153	1426973_at	10140	0.454	-0.0918	No
78	PLEC1	1419835_s_at 1434610_at 1437554_at	10173	0.451	-0.0915	No
79	MGAT3	1422145_at 1428801_at 1428802_at	10226	0.446	-0.0921	No
80	POU4F1	1429667_at 1429668_at	10594	0.409	-0.1073	No
81	EN1	1418618_at	10639	0.404	-0.1077	No
82	STAC	1418957_at 1445344_at	10654	0.402	-0.1067	No
83	RASGRP3	1438030_at 1438031_at	10928	0.369	-0.1177	No
84	MEOX2	1424233_at 1424234_s_at	10976	0.363	-0.1184	No
85	NME5	1422727_at	11078	0.353	-0.1216	No
86	USP47	1426976_at 1426977_at 1457454_at	11103	0.350	-0.1213	No
87	ART3	1441752_at 1452474_a_at	11130	0.348	-0.1211	No
88	HOXA10	1431475_a_at 1446408_at	11213	0.338	-0.1235	No
89	TRDN	1426134_at 1426142_a_at 1426143_at 1426144_x_at 1451801_at 1451940_x_at	11381	0.319	-0.1299	No
90	RHOBTB1	1429206_at 1429656_at	11425	0.313	-0.1306	No
91	CLDN23	1424409_at	11434	0.312	-0.1297	No
92	SCHIP1	1423025_a_at 1437700_at 1446421_at 1458588_at	11542	0.301	-0.1334	No
93	TUBA4	1417373_a_at 1417374_at 1417375_at	11580	0.296	-0.1339	No
94	NR0B2	1449854_at	11683	0.286	-0.1374	No
95	CDH20	1450312_at	11785	0.273	-0.1410	No
96	MAP2K5	1417854_at 1430180_at 1453712_a_at 1455941_s_at	11838	0.267	-0.1423	No
97	MSC	1418417_at	11985	0.252	-0.1480	No
98	ASB18	1426116_at	12056	0.245	-0.1502	No
99	CTNNAL1	1420929_at 1420930_s_at	12090	0.242	-0.1507	No
100	GRIN2B	1422223_at 1431700_at	12124	0.239	-0.1513	No
101	MYST2	1433433_at 1440746_at 1447631_at	12196	0.232	-0.1536	No
102	HRC	1419109_at	12500	0.199	-0.1667	No
103	PLA2G4B	1425045_at 1456047_at	12673	0.180	-0.1739	No
104	PPP1R3A	1422108_at	12797	0.164	-0.1789	No
105	GSC	1421412_at	12822	0.163	-0.1793	No
106	ABR	1433477_at	12915	0.151	-0.1829	No
107	NCOR1	1423200_at 1423201_at 1423202_a_at 1435914_at 1438276_at 1444760_at 1445230_at 1446574_at 1457007_at 1457938_at 1458103_at	12958	0.147	-0.1843	No
108	BICD1	1427530_at 1437548_at 1438701_at 1451684_a_at	13119	0.126	-0.1911	No
109	CFL2	1418066_at 1418067_at 1431432_at	13211	0.117	-0.1948	No
110	MAT2A	1423667_at 1433576_at 1438386_x_at 1438630_x_at 1438976_x_at 1439386_x_at 1456702_x_at	13252	0.111	-0.1962	No
111	PPARGC1A	1434099_at 1434100_x_at 1437751_at 1456395_at 1460336_at	13278	0.108	-0.1969	No
112	CPA4	1453770_at	13494	0.082	-0.2065	No
113	ASB4	1423422_at 1433919_at	13764	0.045	-0.2187	No
114	DNAJA4	1418591_at 1418592_at 1434196_at	13894	0.027	-0.2245	No
115	DMD	1417307_at 1430320_at 1446156_at 1448665_at 1457022_at	13992	0.016	-0.2289	No
116	PAX3	1420389_at 1430335_a_at 1441743_at 1459148_at	14382	-0.040	-0.2466	No
117	AQP1	1416203_at	14505	-0.060	-0.2519	No
118	SLC35C2	1420054_s_at 1420055_at 1460731_at	14520	-0.063	-0.2523	No
119	GIT1	1454759_at	14646	-0.082	-0.2577	No
120	SLC30A1	1422786_at 1436164_at	14703	-0.090	-0.2600	No
121	BNC2	1438861_at 1440593_at 1459132_at	14799	-0.104	-0.2639	No
122	CRISP1	1416325_at	14983	-0.134	-0.2718	No
123	HAPLN1	1421633_a_at 1426294_at 1426295_at 1438020_at 1445735_at 1458109_at	15243	-0.177	-0.2830	No
124	KPNA3	1421828_at 1445527_at 1446538_at 1450385_at 1450386_at	15286	-0.183	-0.2841	No
125	THBS2	1422571_at 1447862_x_at 1450663_at	15420	-0.206	-0.2894	No
126	EHD1	1416010_a_at 1416011_x_at 1416012_at 1448175_at	15490	-0.219	-0.2917	No
127	ANKRD23	1428183_at	15743	-0.270	-0.3022	No
128	GABRB2	1450319_at	16058	-0.339	-0.3153	No
129	PANK1	1418715_at 1429813_at 1429814_at 1431028_a_at 1457110_at	16221	-0.374	-0.3212	No
130	ACTA1	1427735_a_at	16285	-0.393	-0.3225	No
131	TNRC4	1452851_at	16303	-0.397	-0.3217	No
132	IFNB1	1422305_at	16546	-0.456	-0.3309	No
133	PACSIN3	1416995_at 1431534_at 1437834_s_at 1456191_x_at	16647	-0.483	-0.3336	No
134	ADAM11	1450248_at	16877	-0.553	-0.3419	No
135	NANOS1	1436648_at 1455877_a_at	17034	-0.604	-0.3466	No
136	SSH3	1447929_at	17133	-0.639	-0.3485	No
137	DMPK	1422989_a_at 1434944_at	17219	-0.669	-0.3497	No
138	FBXW11	1425461_at 1425462_at 1437468_x_at 1438336_at 1443010_at 1447294_at 1457485_at	17437	-0.752	-0.3566	No
139	ITGB3BP	1420665_at 1442993_at 1449953_at 1456097_a_at	17514	-0.783	-0.3569	No
140	PAK6	1445475_at 1455200_at	17701	-0.859	-0.3620	No
141	NTF3	1434802_s_at 1450803_at	17733	-0.872	-0.3599	No
142	SLC2A4	1415958_at 1415959_at	17966	-0.969	-0.3666	No
143	TLK1	1439158_at 1444730_at 1455024_at 1456407_a_at 1460002_at	18051	-0.999	-0.3664	No
144	EPHA7	1427528_a_at 1443485_at 1445635_at 1451991_at 1452380_at	18174	-1.033	-0.3679	No
145	PLAGL2	1417517_at 1417518_at 1417519_at 1442235_at	18185	-1.035	-0.3641	No
146	RCOR1	1434336_s_at 1437545_at 1454932_at	18318	-1.086	-0.3658	No
147	PRKAG1	1417690_at 1433533_x_at 1457803_at	18359	-1.102	-0.3632	No
148	ELMO1	1424523_at 1446610_at 1450208_a_at	18527	-1.182	-0.3661	No
149	RIT1	1420540_a_at 1428710_at	18578	-1.204	-0.3635	No
150	LBX1	1422323_a_at 1427400_at	18763	-1.297	-0.3667	No
151	CSNK1E	1417175_at 1417176_at 1435373_at	19091	-1.494	-0.3757	No
152	BEX2	1417388_at	19140	-1.525	-0.3717	No
153	FZD8	1423348_at 1445815_at	19661	-1.925	-0.3878	No
154	DYRK2	1428637_at 1436918_at 1456502_at 1457667_x_at	19960	-2.139	-0.3928	Yes
155	TTC17	1428862_at	20089	-2.253	-0.3896	Yes
156	CPEB4	1420617_at 1420618_at 1449931_at	20126	-2.293	-0.3819	Yes
157	PPP2R2A	1429715_at 1437730_at 1453260_a_at	20200	-2.367	-0.3757	Yes
158	GALNT1	1423236_at 1423237_at	20286	-2.457	-0.3697	Yes
159	RARA	1450180_a_at	20702	-3.029	-0.3765	Yes
160	CTCF	1418330_at 1449042_at	20704	-3.033	-0.3642	Yes
161	HIST2H2BE	1447854_s_at 1455095_at	20720	-3.046	-0.3526	Yes
162	ZFP36L1	1422528_a_at 1450644_at	20819	-3.233	-0.3440	Yes
163	FOS	1423100_at	20955	-3.496	-0.3360	Yes
164	DNM2	1423629_at 1425135_a_at 1425136_x_at 1432004_a_at 1432005_at 1437938_x_at 1443150_at 1451057_x_at	21058	-3.701	-0.3257	Yes
165	AMPD1	1434722_at	21067	-3.711	-0.3110	Yes
166	TAX1BP3	1424169_at	21137	-3.874	-0.2985	Yes
167	CPNE1	1433439_at	21177	-3.969	-0.2842	Yes
168	MEIS1	1440431_at 1443260_at 1445773_at 1450992_a_at 1459423_at 1459512_at	21287	-4.272	-0.2719	Yes
169	TMEPAI	1422705_at	21382	-4.660	-0.2574	Yes
170	HDAC7A	1420812_at 1420813_at	21442	-4.861	-0.2404	Yes
171	TUBA1	1418884_x_at	21444	-4.879	-0.2206	Yes
172	SH3BGRL3	1416528_at	21481	-5.070	-0.2018	Yes
173	ABLIM1	1442376_at 1453103_at 1454708_at 1460120_at	21522	-5.257	-0.1823	Yes
174	NR4A1	1416505_at	21561	-5.542	-0.1616	Yes
175	CKB	1455106_a_at	21591	-5.705	-0.1398	Yes
176	CDC42EP3	1422642_at 1450700_at	21733	-6.803	-0.1187	Yes
177	FLI1	1422024_at 1433512_at 1441584_at	21767	-7.169	-0.0912	Yes
178	NNT	1416105_at 1432608_at 1456573_x_at	21850	-7.800	-0.0634	Yes
179	EGR2	1427682_a_at 1427683_at	21904	-8.113	-0.0329	Yes
180	SLC25A4	1424562_a_at 1424563_at 1434897_a_at 1455069_x_at	21926	-8.476	0.0005	Yes